RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 TRDNQ13061 729 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 GREM2Q9H772 168 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 THRAP3Q9Y2W1 955 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 NEDD4P46934 1319 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 ZBTB22O15209 634 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 CCAR2Q8N163 923 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 TRMT112Q9UI30 125 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 WDR19Q8NEZ3 1342 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 ABCC12Q96J65 1359 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 SMC2O95347 1197 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 IL6STP40189 918 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 MCAMP43121 646 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 NLRP12P59046 1061 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 AXDND1Q5T1B0 1012 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 TTLL11Q8NHH1 800 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 IMPACTQ9P2X3 320 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 DENND2AQ9ULE3 1009 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 PFKFB1P16118 471 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 XPO4Q9C0E2 1151 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 IFNKQ9P0W0 207 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 TAOK2Q9UL54 1235 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 UBN2Q6ZU65 1347 aa18.29■□□□□ 0.52
TSPAN4-211ENST00000468468 IRS4O14654 1257 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 ITGA6P23229 1130 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 CMA1P23946 247 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 MARCKSP29966 332 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 ATP6V1AP38606 617 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 LDHAL6AQ6ZMR3 332 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 NBPF3Q9H094 633 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 CDHR2Q9BYE9 1310 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 ADD2P35612 726 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 SLC9C2Q5TAH2 1124 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 AIFM3Q96NN9 605 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 ALG1Q9BT22 464 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 ANGEL1Q9UNK9 670 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
TSPAN4-211ENST00000468468 WDHD1O75717 1129 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-211ENST00000468468 TPM4P67936 248 aa18.27■□□□□ 0.52
TSPAN4-211ENST00000468468 INTS5Q6P9B9 1019 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-211ENST00000468468 TMC6Q7Z403 805 aa18.27■□□□□ 0.52
TSPAN4-211ENST00000468468 ZMYM6O95789 1325 aa18.27■□□□□ 0.52
TSPAN4-211ENST00000468468 APPP05067 770 aa18.27■□□□□ 0.51
TSPAN4-211ENST00000468468 METAP2P50579 478 aaKnown RBP eCLIP18.27■□□□□ 0.51
TSPAN4-211ENST00000468468 CTSWP56202 376 aa18.27■□□□□ 0.51
TSPAN4-211ENST00000468468 SLC39A14Q15043 492 aa18.27■□□□□ 0.51
TSPAN4-211ENST00000468468 CYB5R4Q7L1T6 521 aa18.27■□□□□ 0.51
TSPAN4-211ENST00000468468 RIC1Q4ADV7 1423 aa18.27■□□□□ 0.51
TSPAN4-211ENST00000468468 RXRAP19793 462 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 ISM2Q6H9L7 571 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 TBC1D10CQ8IV04 446 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 NKX2-3Q8TAU0 364 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 CGNQ9P2M7 1197 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 MROH7-TTC4A0A0A0MT08 1334 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 LOC102724428A0A0B4J2F2 783 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 KCNQ2O43526 872 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 CRKLP46109 303 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 SIK1P57059 783 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 ITPK1Q13572 414 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 FEZ1Q99689 392 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 CNNM1Q9NRU3 951 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 KCND1Q9NSA2 647 aa18.26■□□□□ 0.51
TSPAN4-211ENST00000468468 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 SH2B2O14492 632 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 NCAPHQ15003 741 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 KRT40Q6A162 431 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 PIH1D3Q9NQM4 214 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 NUP98P52948 1817 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 TOM1O60784 492 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 CDKL5O76039 1030 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 SYKP43405 635 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 GNL2Q13823 731 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 TTF1Q15361 905 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 ARMCX5Q6P1M9 558 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 VPS37DQ86XT2 251 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 ZNF34Q8IZ26 560 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 CCDC150Q8NCX0 1101 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 KIF18AQ8NI77 898 aa18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 ZNF215Q9UL58 517 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-211ENST00000468468 C4AP0C0L4 1744 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 C4BP0C0L5 1744 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 PLCD3Q8N3E9 789 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 PHKBQ93100 1093 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 GTPBP4Q9BZE4 634 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 DDX60Q8IY21 1712 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 B4E1Z4 1266 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 KIF20AO95235 890 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 LMOD1P29536 600 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 CDC27P30260 824 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 APOA5Q6Q788 366 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 RGS22Q8NE09 1264 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 TIGD1Q96MW7 591 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms