RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SLC16A10Q8TF71 515 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 CAMKK2Q96RR4 588 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 ARMT1Q9H993 441 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 NSFL1CQ9UNZ2 370 aaKnown RBP11.98□□□□□ -0.49
MSH5-213ENST00000468136 LAMA4Q16363 1823 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 ERICH2A1L162 156 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 MMP10P09238 476 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 PDIA3P30101 505 aaKnown RBP11.97□□□□□ -0.49
MSH5-213ENST00000468136 HAND2P61296 217 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 GPSM2P81274 684 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 SBK1Q52WX2 424 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 CCDC178Q5BJE1 867 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 L1TD1Q5T7N2 865 aaKnown RBP11.97□□□□□ -0.49
MSH5-213ENST00000468136 MCTP1Q6DN14 999 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 POTEAQ6S8J7 498 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 SYNE3Q6ZMZ3 975 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 AMOTL1Q8IY63 956 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 LCORLQ8N3X6 602 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 CNKSR1Q969H4 720 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
MSH5-213ENST00000468136 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
MSH5-213ENST00000468136 CD209Q9NNX6 404 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 ARPP21Q9UBL0 812 aaPredicted RBP11.97□□□□□ -0.49
MSH5-213ENST00000468136 RGS17Q9UGC6 210 aaPredicted RBP11.97□□□□□ -0.49
MSH5-213ENST00000468136 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 MTMR6Q9Y217 621 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 MAST2Q6P0Q8 1798 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 LRRC37AA6NMS7 1700 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 TIAM2Q8IVF5 1701 aa11.97□□□□□ -0.49
MSH5-213ENST00000468136 COL1A1P02452 1464 aaPredicted RBP11.96□□□□□ -0.49
MSH5-213ENST00000468136 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 H0YIN7 160 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 SH2B2O14492 632 aaPredicted RBP11.96□□□□□ -0.49
MSH5-213ENST00000468136 FGRP09769 529 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 MECOMQ03112 1051 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 PPARAQ07869 468 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 ST3GAL1Q11201 340 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 SCRN1Q12765 414 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 PKP1Q13835 747 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 NECAB1Q8N987 351 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 TBC1D16Q8TBP0 767 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 ESR2Q92731 530 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.49
MSH5-213ENST00000468136 EPB41L4AQ9HCS5 686 aaPredicted RBP11.96□□□□□ -0.49
MSH5-213ENST00000468136 DDX49Q9Y6V7 483 aaKnown RBP11.96□□□□□ -0.49
MSH5-213ENST00000468136 COL4A1P02462 1669 aa11.96□□□□□ -0.5
MSH5-213ENST00000468136 CACNA1SQ13698 1873 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 NID2Q14112 1375 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 CPLX1O14810 134 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 APOBRQ0VD83 1088 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 CHAF1AQ13111 956 aaPredicted RBP11.95□□□□□ -0.5
MSH5-213ENST00000468136 TBC1D10CQ8IV04 446 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 MPNDQ8N594 471 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
MSH5-213ENST00000468136 TCEANC2Q96MN5 208 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 ZC3H12CQ9C0D7 883 aaKnown RBP11.95□□□□□ -0.5
MSH5-213ENST00000468136 LMBRD1Q9NUN5 540 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 IQSEC3Q9UPP2 1182 aaPredicted RBP11.95□□□□□ -0.5
MSH5-213ENST00000468136 MYH13Q9UKX3 1938 aa11.95□□□□□ -0.5
MSH5-213ENST00000468136 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 TAF1P21675 1872 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 CCDC88AQ3V6T2 1871 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 KLF18A0A0U1RQI7 1052 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 C6orf229H3BNL8 230 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 H3BQV1 296 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 ORC4O43929 436 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 KLRK1P26718 216 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 ANTXR2P58335 489 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 FKBP1AP62942 108 aaKnown RBP11.94□□□□□ -0.5
MSH5-213ENST00000468136 KRT85P78386 507 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 PDE4BQ07343 736 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 SUPT20HQ8NEM7 779 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 WASF1Q92558 559 aa11.94□□□□□ -0.5
MSH5-213ENST00000468136 SCAND2PQ9GZW5 306 aaPredicted RBP11.94□□□□□ -0.5
MSH5-213ENST00000468136 ELP1O95163 1332 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 CCDC69A6NI79 296 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 GOLGA8BA8MQT2 603 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 IFIT3O14879 490 aaKnown RBP11.93□□□□□ -0.5
MSH5-213ENST00000468136 CALM1P0DP23 149 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 CALM2P0DP24 149 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 CALM3P0DP25 149 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 DEKP35659 375 aaKnown RBP11.93□□□□□ -0.5
MSH5-213ENST00000468136 STK3Q13188 491 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 TMEM67Q5HYA8 995 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 DPP8Q6V1X1 898 aaPredicted RBP11.93□□□□□ -0.5
MSH5-213ENST00000468136 PODNQ7Z5L7 613 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 TXNRD3Q86VQ6 643 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 IQCA1Q86XH1 822 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 MIGA1Q8NAN2 632 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 IGDCC4Q8TDY8 1250 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 LARP6Q9BRS8 491 aaKnown RBP11.93□□□□□ -0.5
MSH5-213ENST00000468136 UBAC1Q9BSL1 405 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 MRIQ9BWK5 157 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 CFAP45Q9UL16 551 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 SLC12A7Q9Y666 1083 aa11.93□□□□□ -0.5
MSH5-213ENST00000468136 MYO5AQ9Y4I1 1855 aaKnown RBP11.93□□□□□ -0.5
MSH5-213ENST00000468136 MROH7-TTC4A0A0A0MT08 1334 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms