RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 CETPP11597 493 aa13.58□□□□□ -0.24
PRPF3-203ENST00000467514 PRMT2P55345 433 aa13.58□□□□□ -0.24
PRPF3-203ENST00000467514 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
PRPF3-203ENST00000467514 ATP8B2P98198 1209 aa13.58□□□□□ -0.24
PRPF3-203ENST00000467514 NUCB1Q02818 461 aa13.58□□□□□ -0.24
PRPF3-203ENST00000467514 MTX1Q13505 466 aa13.58□□□□□ -0.24
PRPF3-203ENST00000467514 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
PRPF3-203ENST00000467514 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
PRPF3-203ENST00000467514 ZNF70Q9UC06 446 aaPredicted RBP13.58□□□□□ -0.24
PRPF3-203ENST00000467514 LRRFIP2Q9Y608 721 aaKnown RBP13.58□□□□□ -0.24
PRPF3-203ENST00000467514 SNAP23O00161 211 aa13.57□□□□□ -0.24
PRPF3-203ENST00000467514 GRM8O00222 908 aa13.57□□□□□ -0.24
PRPF3-203ENST00000467514 TLR2O60603 784 aa13.57□□□□□ -0.24
PRPF3-203ENST00000467514 FMNL1O95466 1100 aaPredicted RBP13.57□□□□□ -0.24
PRPF3-203ENST00000467514 HOXD10P28358 340 aa13.57□□□□□ -0.24
PRPF3-203ENST00000467514 POLA2Q14181 598 aa13.57□□□□□ -0.24
PRPF3-203ENST00000467514 GCKRQ14397 625 aa13.57□□□□□ -0.24
PRPF3-203ENST00000467514 KAZALD1Q96I82 304 aa13.57□□□□□ -0.24
PRPF3-203ENST00000467514 TTF2Q9UNY4 1162 aaKnown RBP13.57□□□□□ -0.24
PRPF3-203ENST00000467514 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 A0A1B0GUL6 1792 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 PDE4AP27815 886 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 CASP7P55210 303 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 FKBP1AP62942 108 aaKnown RBP13.56□□□□□ -0.24
PRPF3-203ENST00000467514 UBXN2AP68543 259 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 IFIT5Q13325 482 aaKnown RBP13.56□□□□□ -0.24
PRPF3-203ENST00000467514 SNAPC2Q13487 334 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 MTFR1Q15390 333 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 MFSD14BQ5SR56 506 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.56□□□□□ -0.24
PRPF3-203ENST00000467514 SSH3Q8TE77 659 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 TMEM39BQ9GZU3 492 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 RNF208Q9H0X6 261 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 AOX1Q06278 1338 aa13.56□□□□□ -0.24
PRPF3-203ENST00000467514 PNMA6EA0A0J9YXQ4 647 aa13.55□□□□□ -0.24
PRPF3-203ENST00000467514 IL1R1P14778 569 aa13.55□□□□□ -0.24
PRPF3-203ENST00000467514 GRK4P32298 578 aa13.55□□□□□ -0.24
PRPF3-203ENST00000467514 PSMC4P43686 418 aa13.55□□□□□ -0.24
PRPF3-203ENST00000467514 TRIM47Q96LD4 638 aa13.55□□□□□ -0.24
PRPF3-203ENST00000467514 WRNIP1Q96S55 665 aa13.55□□□□□ -0.24
PRPF3-203ENST00000467514 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
PRPF3-203ENST00000467514 SPDYE5A6NIY4 337 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 BTBD19C9JJ37 291 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 H7C1W4 665 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 HMMRO75330 724 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 FRAT2O75474 233 aaPredicted RBP13.54□□□□□ -0.24
PRPF3-203ENST00000467514 FARP2O94887 1054 aaPredicted RBP13.54□□□□□ -0.24
PRPF3-203ENST00000467514 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.54□□□□□ -0.24
PRPF3-203ENST00000467514 SHISA4Q96DD7 197 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 HOOK2Q96ED9 719 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 SUCLG2Q96I99 432 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 CNNM1Q9NRU3 951 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 C9orf78Q9NZ63 289 aaPredicted RBP13.54□□□□□ -0.24
PRPF3-203ENST00000467514 CPA4Q9UI42 421 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 SERPINA10Q9UK55 444 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 RIPOR2Q9Y4F9 1068 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 MYPNQ86TC9 1320 aa13.54□□□□□ -0.24
PRPF3-203ENST00000467514 RANBP2P49792 3224 aaKnown RBP13.54□□□□□ -0.24
PRPF3-203ENST00000467514 EVI5O60447 810 aa13.53□□□□□ -0.24
PRPF3-203ENST00000467514 CCL5P13501 91 aa13.53□□□□□ -0.24
PRPF3-203ENST00000467514 CHD1LQ86WJ1 897 aa13.53□□□□□ -0.24
PRPF3-203ENST00000467514 VPS37DQ86XT2 251 aa13.53□□□□□ -0.24
PRPF3-203ENST00000467514 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
PRPF3-203ENST00000467514 ZCCHC17Q9NP64 241 aaKnown RBP13.53□□□□□ -0.24
PRPF3-203ENST00000467514 SRRDQ9UH36 339 aa13.53□□□□□ -0.24
PRPF3-203ENST00000467514 AK9Q5TCS8 1911 aa13.52□□□□□ -0.24
PRPF3-203ENST00000467514 GJB1P08034 283 aa13.52□□□□□ -0.25
PRPF3-203ENST00000467514 OSBPP22059 807 aa13.52□□□□□ -0.25
PRPF3-203ENST00000467514 CRKP46108 304 aa13.52□□□□□ -0.25
PRPF3-203ENST00000467514 GJA8P48165 433 aa13.52□□□□□ -0.25
PRPF3-203ENST00000467514 CCDC57Q2TAC2 916 aa13.52□□□□□ -0.25
PRPF3-203ENST00000467514 C15orf52Q6ZUT6 534 aaKnown RBP13.52□□□□□ -0.25
PRPF3-203ENST00000467514 ZKSCAN4Q969J2 545 aaPredicted RBP13.52□□□□□ -0.25
PRPF3-203ENST00000467514 COL6A3P12111 3177 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 A0A0C4DFX4 3053 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 IRF6O14896 467 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 RGS3P49796 1198 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 CACNB3P54284 484 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
PRPF3-203ENST00000467514 PPIL2Q13356 520 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 RABL6Q3YEC7 729 aaPredicted RBP13.51□□□□□ -0.25
PRPF3-203ENST00000467514 DCAF15Q66K64 600 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 SNCAIPQ9Y6H5 919 aa13.51□□□□□ -0.25
PRPF3-203ENST00000467514 A0A1W2PPC1 479 aa13.5□□□□□ -0.25
PRPF3-203ENST00000467514 CSF1RP07333 972 aa13.5□□□□□ -0.25
PRPF3-203ENST00000467514 HIBADHP31937 336 aaKnown RBP13.5□□□□□ -0.25
PRPF3-203ENST00000467514 FCGRTP55899 365 aa13.5□□□□□ -0.25
PRPF3-203ENST00000467514 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
PRPF3-203ENST00000467514 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
PRPF3-203ENST00000467514 U2AF1L4Q8WU68 220 aaKnown RBP13.5□□□□□ -0.25
PRPF3-203ENST00000467514 LRCH3Q96II8 777 aa13.5□□□□□ -0.25
PRPF3-203ENST00000467514 BICC1Q9H694 974 aaKnown RBP13.5□□□□□ -0.25
PRPF3-203ENST00000467514 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms