RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SCAF8Q9UPN6 1271 aaKnown RBP13.46□□□□□ -0.25
MSH5-212ENST00000467319 COL2A1P02458 1487 aaPredicted RBP13.46□□□□□ -0.25
MSH5-212ENST00000467319 OTOFQ9HC10 1997 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 TMEM88BA6NKF7 163 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 GOLIM4O00461 696 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 CELF2O95319 508 aaKnown RBP13.45□□□□□ -0.26
MSH5-212ENST00000467319 BTDP43251 543 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 RHBDL3P58872 404 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 TNFAIP1Q13829 316 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 TTF1Q15361 905 aaPredicted RBP13.45□□□□□ -0.26
MSH5-212ENST00000467319 CHD1LQ86WJ1 897 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 EDC3Q96F86 508 aaKnown RBP13.45□□□□□ -0.26
MSH5-212ENST00000467319 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
MSH5-212ENST00000467319 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 BOLA2Q9H3K6 86 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 VEZTQ9HBM0 779 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 PAG1Q9NWQ8 432 aa13.45□□□□□ -0.26
MSH5-212ENST00000467319 IDH1O75874 414 aaKnown RBP13.44□□□□□ -0.26
MSH5-212ENST00000467319 MAP4K4O95819 1239 aaPredicted RBP13.44□□□□□ -0.26
MSH5-212ENST00000467319 CACNB3P54284 484 aa13.44□□□□□ -0.26
MSH5-212ENST00000467319 RASA3Q14644 834 aa13.44□□□□□ -0.26
MSH5-212ENST00000467319 NAA16Q6N069 864 aaPredicted RBP13.44□□□□□ -0.26
MSH5-212ENST00000467319 FAM83AQ86UY5 434 aa13.44□□□□□ -0.26
MSH5-212ENST00000467319 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
MSH5-212ENST00000467319 TEPSINQ96N21 525 aa13.44□□□□□ -0.26
MSH5-212ENST00000467319 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
MSH5-212ENST00000467319 BCL11AQ9H165 835 aa13.44□□□□□ -0.26
MSH5-212ENST00000467319 ATRNL1Q5VV63 1379 aa13.44□□□□□ -0.26
MSH5-212ENST00000467319 TCRBV5S4A2TA0A5A2 114 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 WDHD1O75717 1129 aaPredicted RBP13.43□□□□□ -0.26
MSH5-212ENST00000467319 GLRX3O76003 335 aaKnown RBP13.43□□□□□ -0.26
MSH5-212ENST00000467319 LDHCP07864 332 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 PDE6AP16499 860 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 PDE1AP54750 535 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 HTRA3P83110 453 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 MAP3K12Q12852 859 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 NFIAQ12857 509 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 IDI2Q9BXS1 227 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 TMOD2Q9NZR1 351 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 TLL2Q9Y6L7 1015 aa13.43□□□□□ -0.26
MSH5-212ENST00000467319 SIPA1L1O43166 1804 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 RASSF10A6NK89 507 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 ERC2O15083 957 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
MSH5-212ENST00000467319 PPP4CP60510 307 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 FKBP1BP68106 108 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 PRAMEF18Q5VWM3 479 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 MAGEB6Q8N7X4 407 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 TMEM39BQ9GZU3 492 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 GBA2Q9HCG7 927 aaPredicted RBP13.42□□□□□ -0.26
MSH5-212ENST00000467319 USP40Q9NVE5 1235 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 LAMB1P07942 1786 aa13.42□□□□□ -0.26
MSH5-212ENST00000467319 CYP7A1P22680 504 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 ADD2P35612 726 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 TNNI2P48788 182 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 KBTBD3Q8NAB2 608 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 HHIPL1Q96JK4 782 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 OSBPL3Q9H4L5 887 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 ZNF408Q9H9D4 720 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 DDX4Q9NQI0 724 aaKnown RBP13.41□□□□□ -0.26
MSH5-212ENST00000467319 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
MSH5-212ENST00000467319 PCNTO95613 3336 aa13.41□□□□□ -0.26
MSH5-212ENST00000467319 NAV1Q8NEY1 1877 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 ENTPD3O75355 529 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 PDE4AP27815 886 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 RGS3P49796 1198 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.26
MSH5-212ENST00000467319 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 CERS3Q8IU89 383 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 PLEKHM2Q8IWE5 1019 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 DNAJC5GQ8N7S2 189 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
MSH5-212ENST00000467319 FAM151AQ8WW52 585 aa13.4□□□□□ -0.26
MSH5-212ENST00000467319 RIOK1Q9BRS2 568 aaKnown RBP13.4□□□□□ -0.26
MSH5-212ENST00000467319 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
MSH5-212ENST00000467319 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
MSH5-212ENST00000467319 BAG3O95817 575 aa13.39□□□□□ -0.27
MSH5-212ENST00000467319 PLCG2P16885 1265 aa13.39□□□□□ -0.27
MSH5-212ENST00000467319 NF2P35240 595 aa13.39□□□□□ -0.27
MSH5-212ENST00000467319 UBE3CQ15386 1083 aa13.39□□□□□ -0.27
MSH5-212ENST00000467319 MAP3K11Q16584 847 aa13.39□□□□□ -0.27
MSH5-212ENST00000467319 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
MSH5-212ENST00000467319 MIGA1Q8NAN2 632 aa13.39□□□□□ -0.27
MSH5-212ENST00000467319 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.39□□□□□ -0.271e-14■■■□□ 18.5
MSH5-212ENST00000467319 ABT1Q9ULW3 272 aaKnown RBP13.39□□□□□ -0.27
MSH5-212ENST00000467319 CHGBP05060 677 aa13.38□□□□□ -0.27
MSH5-212ENST00000467319 NEFLP07196 543 aa13.38□□□□□ -0.27
MSH5-212ENST00000467319 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
MSH5-212ENST00000467319 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
MSH5-212ENST00000467319 ZFPM1Q8IX07 1006 aa13.38□□□□□ -0.27
MSH5-212ENST00000467319 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
MSH5-212ENST00000467319 C2orf69Q8N8R5 385 aa13.38□□□□□ -0.27
MSH5-212ENST00000467319 NOL10Q9BSC4 688 aaKnown RBP13.38□□□□□ -0.27
MSH5-212ENST00000467319 FLT1P17948 1338 aa13.38□□□□□ -0.27
MSH5-212ENST00000467319 HUNKP57058 714 aa13.37□□□□□ -0.27
MSH5-212ENST00000467319 DYNLL1P63167 89 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms