RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 COL9A3Q14050 684 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-207ENST00000467273 ZNF295-AS1Q8N0V1 137 aa7.8□□□□□ -1.16
PTCD3-207ENST00000467273 MDFIQ99750 246 aa7.8□□□□□ -1.16
PTCD3-207ENST00000467273 STARD13Q9Y3M8 1113 aa7.8□□□□□ -1.16
PTCD3-207ENST00000467273 KAT6BQ8WYB5 2073 aa7.8□□□□□ -1.16
PTCD3-207ENST00000467273 CENPJQ9HC77 1338 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-207ENST00000467273 A6NJY4 79 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 CDK2AP1O14519 115 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 HYAL3O43820 417 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-207ENST00000467273 TRAPPC3LQ5T215 181 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 LRRC69Q6ZNQ3 347 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 COL23A1Q86Y22 540 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-207ENST00000467273 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 MICALL1Q8N3F8 863 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 PRDM6Q9NQX0 595 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 NLRP2Q9NX02 1062 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 IQSEC3Q9UPP2 1182 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-207ENST00000467273 C5P01031 1676 aa7.79□□□□□ -1.16
PTCD3-207ENST00000467273 NSD3Q9BZ95 1437 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 DOT1LQ8TEK3 1739 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 ADARB2-AS1A8MUL3 147 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 H2AFB2P0C5Z0 115 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 NID1P14543 1247 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 TXLNAP40222 546 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 ADH7P40394 386 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 RAB44Q7Z6P3 723 aaPredicted RBP7.78□□□□□ -1.16
PTCD3-207ENST00000467273 CCNL1Q9UK58 526 aaPredicted RBP7.78□□□□□ -1.16
PTCD3-207ENST00000467273 USP31Q70CQ4 1352 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 USP47Q96K76 1375 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 C10orf71Q711Q0 1435 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 IGSF1Q8N6C5 1336 aa7.78□□□□□ -1.16
PTCD3-207ENST00000467273 LTN1O94822 1766 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 NSD2O96028 1365 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 PLEKHG2Q9H7P9 1386 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 C9orf172C9J069 976 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 TRIM26Q12899 539 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-207ENST00000467273 MBTPS1Q14703 1052 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 SLC30A3Q99726 388 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 ALG2Q9H553 416 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 GOLGA2P5Q9HBQ8 144 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 NEUROD4Q9HD90 331 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 EVC2Q86UK5 1308 aa7.77□□□□□ -1.17
PTCD3-207ENST00000467273 MON2Q7Z3U7 1717 aa7.76□□□□□ -1.17
PTCD3-207ENST00000467273 PDIA4P13667 645 aaKnown RBP7.76□□□□□ -1.17
PTCD3-207ENST00000467273 ADGRE1Q14246 886 aa7.76□□□□□ -1.17
PTCD3-207ENST00000467273 MTFR1Q15390 333 aa7.76□□□□□ -1.17
PTCD3-207ENST00000467273 C16orf71Q8IYS4 520 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-207ENST00000467273 TNFRSF25Q93038 417 aa7.76□□□□□ -1.17
PTCD3-207ENST00000467273 TP53INP1Q96A56 240 aa7.76□□□□□ -1.17
PTCD3-207ENST00000467273 TAF1LQ8IZX4 1826 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 SFSWAPQ12872 951 aaKnown RBP7.75□□□□□ -1.17
PTCD3-207ENST00000467273 NEUROD1Q13562 356 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 MSL1Q68DK7 614 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 TXNRD3Q86VQ6 643 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 PLPP7Q8NBV4 271 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 DDX54Q8TDD1 881 aaKnown RBP7.75□□□□□ -1.17
PTCD3-207ENST00000467273 ANKRD24Q8TF21 1146 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 SYTL4Q96C24 671 aaPredicted RBP7.75□□□□□ -1.17
PTCD3-207ENST00000467273 SLC4A9Q96Q91 983 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 WWC3Q9ULE0 1092 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 KIF13BQ9NQT8 1826 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 CGNL1Q0VF96 1302 aa7.75□□□□□ -1.17
PTCD3-207ENST00000467273 KTN1Q86UP2 1357 aaKnown RBP7.74□□□□□ -1.17
PTCD3-207ENST00000467273 SELPP16109 830 aa7.74□□□□□ -1.17
PTCD3-207ENST00000467273 KCNQ4P56696 695 aa7.74□□□□□ -1.17
PTCD3-207ENST00000467273 TBC1D8BQ0IIM8 1120 aa7.74□□□□□ -1.17
PTCD3-207ENST00000467273 SPEM2Q0P670 501 aa7.74□□□□□ -1.17
PTCD3-207ENST00000467273 KDM2BQ8NHM5 1336 aa7.74□□□□□ -1.17
PTCD3-207ENST00000467273 TNRC6CQ9HCJ0 1690 aaKnown RBP7.73□□□□□ -1.17
PTCD3-207ENST00000467273 C4BP0C0L5 1744 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 LILRB5O75023 590 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 ELNP15502 786 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 RFX1P22670 979 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 TGFB2P61812 414 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 MAP7D1Q3KQU3 841 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 SHISA2Q6UWI4 295 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 NPM2Q86SE8 214 aaKnown RBP7.73□□□□□ -1.17
PTCD3-207ENST00000467273 ZCRB1Q8TBF4 217 aaKnown RBP7.73□□□□□ -1.17
PTCD3-207ENST00000467273 L3MBTL2Q969R5 705 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 ZNF232Q9UNY5 417 aa7.73□□□□□ -1.17
PTCD3-207ENST00000467273 UBR3Q6ZT12 1888 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 A0A0A0MRY4 1105 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 SSFA2P28290 1259 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 SOX11P35716 441 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 RAC1P63000 192 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 NRG1Q02297 640 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-207ENST00000467273 SEMA3FQ13275 785 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 RETREG2Q8NC44 543 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 ZDHHC1Q8WTX9 485 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 IP6K1Q92551 441 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 UCN2Q96RP3 112 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 NMRK2Q9NPI5 230 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 PXDNLA1KZ92 1463 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 PKD1L3Q7Z443 1732 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 TOGARAM1Q9Y4F4 1720 aa7.72□□□□□ -1.17
PTCD3-207ENST00000467273 RAB3GAP2Q9H2M9 1393 aa7.71□□□□□ -1.17
PTCD3-207ENST00000467273 SMC1BQ8NDV3 1235 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms