RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 RNF20Q5VTR2 975 aa15.51■□□□□ 0.07
COL4A1-202ENST00000467182 LARGE2Q8N3Y3 721 aa15.51■□□□□ 0.07
COL4A1-202ENST00000467182 TTC14Q96N46 770 aa15.51■□□□□ 0.07
COL4A1-202ENST00000467182 CTNNA3Q9UI47 895 aa15.51■□□□□ 0.07
COL4A1-202ENST00000467182 BAZ2AQ9UIF9 1905 aaKnown RBP15.51■□□□□ 0.07
COL4A1-202ENST00000467182 RASSF7Q02833 373 aa15.5■□□□□ 0.07
COL4A1-202ENST00000467182 SDR42E1Q8WUS8 393 aa15.5■□□□□ 0.07
COL4A1-202ENST00000467182 JAKMIP1Q96N16 626 aaKnown RBP15.5■□□□□ 0.07
COL4A1-202ENST00000467182 SYT17Q9BSW7 474 aa15.5■□□□□ 0.07
COL4A1-202ENST00000467182 UPF3BQ9BZI7 483 aaKnown RBP15.5■□□□□ 0.07
COL4A1-202ENST00000467182 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
COL4A1-202ENST00000467182 NAV1Q8NEY1 1877 aa15.5■□□□□ 0.07
COL4A1-202ENST00000467182 ECM29Q5VYK3 1845 aa15.5■□□□□ 0.07
COL4A1-202ENST00000467182 CPA1P15085 419 aa15.49■□□□□ 0.07
COL4A1-202ENST00000467182 BTDP43251 543 aa15.49■□□□□ 0.07
COL4A1-202ENST00000467182 SLC4A3P48751 1232 aa15.49■□□□□ 0.07
COL4A1-202ENST00000467182 NEK4P51957 841 aa15.49■□□□□ 0.07
COL4A1-202ENST00000467182 RHBDL3P58872 404 aa15.49■□□□□ 0.07
COL4A1-202ENST00000467182 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
COL4A1-202ENST00000467182 MRIQ9BWK5 157 aa15.49■□□□□ 0.07
COL4A1-202ENST00000467182 MKRN1Q9UHC7 482 aaKnown RBP15.49■□□□□ 0.07
COL4A1-202ENST00000467182 ZNRF3Q9ULT6 936 aa15.49■□□□□ 0.07
COL4A1-202ENST00000467182 TTF2Q9UNY4 1162 aaKnown RBP15.49■□□□□ 0.07
COL4A1-202ENST00000467182 TACC3Q9Y6A5 838 aa15.49■□□□□ 0.07
COL4A1-202ENST00000467182 E7EWF7 191 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 F8W031 263 aaPredicted RBP15.48■□□□□ 0.07
COL4A1-202ENST00000467182 APPP05067 770 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 VIL1P09327 827 aaKnown RBP15.48■□□□□ 0.07
COL4A1-202ENST00000467182 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
COL4A1-202ENST00000467182 HAND2P61296 217 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 KRT32Q14532 448 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 IMMTQ16891 758 aaKnown RBP15.48■□□□□ 0.07
COL4A1-202ENST00000467182 GIMAP6Q6P9H5 292 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 TBC1D10CQ8IV04 446 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 SLF2Q8IX21 1173 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 NIM1KQ8IY84 436 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 GMLQ99445 158 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 DICER1Q9UPY3 1922 aaKnown RBP15.48■□□□□ 0.07
COL4A1-202ENST00000467182 SBF1O95248 1867 aa15.48■□□□□ 0.07
COL4A1-202ENST00000467182 PSMD14O00487 310 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 ZNF213O14771 459 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 RPS6KB1P23443 525 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 SCNN1DP51172 638 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 BECN1Q14457 450 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 RSBN1LQ6PCB5 846 aaPredicted RBP15.47■□□□□ 0.07
COL4A1-202ENST00000467182 HHIPL2Q6UWX4 724 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 RUFY3Q7L099 469 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 CRNKL1Q9BZJ0 848 aaKnown RBP15.47■□□□□ 0.07
COL4A1-202ENST00000467182 NAPBQ9H115 298 aa15.47■□□□□ 0.07
COL4A1-202ENST00000467182 DCP1AQ9NPI6 582 aaPredicted RBP15.47■□□□□ 0.07
COL4A1-202ENST00000467182 RAD17O75943 681 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 BAG3O95817 575 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 PSMA5P28066 241 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 CRKP46108 304 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 HDLBPQ00341 1268 aaKnown RBP15.46■□□□□ 0.07
COL4A1-202ENST00000467182 CXCL9Q07325 125 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 CERS3Q8IU89 383 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 KIAA0825Q8IV33 1275 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 HSCBQ8IWL3 235 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 NEK1Q96PY6 1258 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 NACAP1Q9BZK3 213 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 ALDH8A1Q9H2A2 487 aaPredicted RBP15.46■□□□□ 0.07
COL4A1-202ENST00000467182 ATP8A2Q9NTI2 1148 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 ANAPC4Q9UJX5 808 aa15.46■□□□□ 0.07
COL4A1-202ENST00000467182 SMIM22K7EJ46 135 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 K7ELQ4 463 aaPredicted RBP15.45■□□□□ 0.06
COL4A1-202ENST00000467182 ST18O60284 1047 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 TDO2P48775 406 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 AK2P54819 239 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 EXOSC10Q01780 885 aaKnown RBP15.45■□□□□ 0.06
COL4A1-202ENST00000467182 APOBEC3HQ6NTF7 200 aaKnown RBP15.45■□□□□ 0.06
COL4A1-202ENST00000467182 CTR9Q6PD62 1173 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 BLOC1S2Q6QNY1 142 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 ZDHHC15Q96MV8 337 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 PCDHAC2Q9Y5I4 1007 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
COL4A1-202ENST00000467182 MYO3BQ8WXR4 1341 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 FZD9O00144 591 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 YBX3P16989 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL4A1-202ENST00000467182 EVX2Q03828 476 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 CTDSPL2Q05D32 466 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 PPARAQ07869 468 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 SBK1Q52WX2 424 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 MB21D2Q8IYB1 491 aaPredicted RBP15.44■□□□□ 0.06
COL4A1-202ENST00000467182 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 NOL10Q9BSC4 688 aaKnown RBP15.44■□□□□ 0.06
COL4A1-202ENST00000467182 PDRG1Q9NUG6 133 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 SERPINA10Q9UK55 444 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 MYH1P12882 1939 aa15.44■□□□□ 0.06
COL4A1-202ENST00000467182 GOLGB1Q14789 3259 aaKnown RBP15.43■□□□□ 0.06
COL4A1-202ENST00000467182 CYP2D7A0A087X1C5 515 aa15.43■□□□□ 0.06
COL4A1-202ENST00000467182 PLCG2P16885 1265 aa15.43■□□□□ 0.06
COL4A1-202ENST00000467182 TOB2Q14106 344 aaPredicted RBP15.43■□□□□ 0.06
COL4A1-202ENST00000467182 TEX11Q8IYF3 940 aa15.43■□□□□ 0.06
COL4A1-202ENST00000467182 STAG1Q8WVM7 1258 aa15.43■□□□□ 0.06
COL4A1-202ENST00000467182 TCEANC2Q96MN5 208 aa15.43■□□□□ 0.06
COL4A1-202ENST00000467182 INCENPQ9NQS7 918 aa15.43■□□□□ 0.06
COL4A1-202ENST00000467182 NEDD4P46934 1319 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms