RNA–Protein interactions for RNA: ENST00000466635.1

SYP-203, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-203ENST00000466635 ANGEL2Q5VTE6 544 aaKnown RBP16.24■□□□□ 0.19
SYP-203ENST00000466635 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
SYP-203ENST00000466635 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
SYP-203ENST00000466635 GGA3Q9NZ52 723 aa16.24■□□□□ 0.19
SYP-203ENST00000466635 ZNF70Q9UC06 446 aaPredicted RBP16.24■□□□□ 0.19
SYP-203ENST00000466635 PITPNM2Q9BZ72 1349 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 TCRBV5S4A2TA0A5A2 114 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 POTEIP0CG38 1075 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 POTEJP0CG39 1038 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 GSPT1P15170 499 aaKnown RBP16.23■□□□□ 0.19
SYP-203ENST00000466635 PPP4CP60510 307 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 CDC42EP5Q6NZY7 148 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 SKAP1Q86WV1 359 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 APOBEC3FQ8IUX4 373 aaKnown RBP16.23■□□□□ 0.19
SYP-203ENST00000466635 SULF1Q8IWU6 871 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 VEZTQ9HBM0 779 aa16.23■□□□□ 0.19
SYP-203ENST00000466635 AATFQ9NY61 560 aaKnown RBP eCLIP16.23■□□□□ 0.19
SYP-203ENST00000466635 ASTN2O75129 1339 aaPredicted RBP16.22■□□□□ 0.19
SYP-203ENST00000466635 MAGEB6P1A0A0J9YX57 407 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 HIP1O00291 1037 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 SDSP20132 328 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 TNNI2P48788 182 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 TNFAIP1Q13829 316 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 CDC37L1Q7L3B6 337 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 ADGRA1Q86SQ6 560 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 MIGA1Q8NAN2 632 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 SMC1BQ8NDV3 1235 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 RBM46Q8TBY0 533 aaKnown RBP16.22■□□□□ 0.19
SYP-203ENST00000466635 APPBP2Q92624 585 aa16.22■□□□□ 0.19
SYP-203ENST00000466635 BMP2KLQ5H9B9 411 aa16.21■□□□□ 0.19
SYP-203ENST00000466635 FKBP1CQ5VVH2 108 aa16.21■□□□□ 0.19
SYP-203ENST00000466635 MAP1SQ66K74 1059 aaPredicted RBP16.21■□□□□ 0.19
SYP-203ENST00000466635 KRT26Q7Z3Y9 468 aa16.21■□□□□ 0.19
SYP-203ENST00000466635 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
SYP-203ENST00000466635 RFX7Q2KHR2 1363 aa16.21■□□□□ 0.19
SYP-203ENST00000466635 TEX11Q8IYF3 940 aa16.2■□□□□ 0.18
SYP-203ENST00000466635 DIAPH3Q9NSV4 1193 aa16.2■□□□□ 0.18
SYP-203ENST00000466635 TCP10L2B9ZVM9 353 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 CACNB3P54284 484 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 RHBDL3P58872 404 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 DYNLL1P63167 89 aaKnown RBP16.19■□□□□ 0.18
SYP-203ENST00000466635 FSTL1Q12841 308 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 SLFNL1Q499Z3 407 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 ZMYM1Q5SVZ6 1142 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 USP48Q86UV5 1035 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 SH3RF3Q8TEJ3 882 aaPredicted RBP16.19■□□□□ 0.18
SYP-203ENST00000466635 IDI2Q9BXS1 227 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
SYP-203ENST00000466635 PPP2R3BQ9Y5P8 575 aa16.19■□□□□ 0.18
SYP-203ENST00000466635 MBD4O95243 580 aa16.18■□□□□ 0.18
SYP-203ENST00000466635 CHGBP05060 677 aa16.18■□□□□ 0.18
SYP-203ENST00000466635 FAM83AQ86UY5 434 aa16.18■□□□□ 0.18
SYP-203ENST00000466635 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
SYP-203ENST00000466635 RIOK1Q9BRS2 568 aaKnown RBP16.18■□□□□ 0.18
SYP-203ENST00000466635 GLIS2Q9BZE0 524 aaPredicted RBP16.18■□□□□ 0.18
SYP-203ENST00000466635 PUS7LQ9H0K6 701 aaKnown RBP16.18■□□□□ 0.18
SYP-203ENST00000466635 DEFB129Q9H1M3 183 aa16.18■□□□□ 0.18
SYP-203ENST00000466635 ARMT1Q9H993 441 aa16.18■□□□□ 0.18
SYP-203ENST00000466635 HELLSQ9NRZ9 838 aa16.18■□□□□ 0.18
SYP-203ENST00000466635 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
SYP-203ENST00000466635 ENTPD3O75355 529 aa16.17■□□□□ 0.18
SYP-203ENST00000466635 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
SYP-203ENST00000466635 WDHD1O75717 1129 aaPredicted RBP16.17■□□□□ 0.18
SYP-203ENST00000466635 USP5P45974 858 aa16.17■□□□□ 0.18
SYP-203ENST00000466635 PICALMQ13492 652 aa16.17■□□□□ 0.18
SYP-203ENST00000466635 RASA3Q14644 834 aa16.17■□□□□ 0.18
SYP-203ENST00000466635 LCORLQ8N3X6 602 aa16.17■□□□□ 0.18
SYP-203ENST00000466635 FAM151AQ8WW52 585 aa16.17■□□□□ 0.18
SYP-203ENST00000466635 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
SYP-203ENST00000466635 ADM5C9JUS6 153 aa16.16■□□□□ 0.18
SYP-203ENST00000466635 GNAT2P19087 354 aa16.16■□□□□ 0.18
SYP-203ENST00000466635 MFAP1P55081 439 aaKnown RBP16.16■□□□□ 0.18
SYP-203ENST00000466635 TCP10Q12799 353 aa16.16■□□□□ 0.18
SYP-203ENST00000466635 NFIAQ12857 509 aa16.16■□□□□ 0.18
SYP-203ENST00000466635 NMIQ13287 307 aaPredicted RBP16.16■□□□□ 0.18
SYP-203ENST00000466635 MCMDC2Q4G0Z9 681 aa16.16■□□□□ 0.18
SYP-203ENST00000466635 TGFBRAP1Q8WUH2 860 aa16.16■□□□□ 0.18
SYP-203ENST00000466635 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
SYP-203ENST00000466635 DDRGK1Q96HY6 314 aa16.16■□□□□ 0.18
SYP-203ENST00000466635 SCAF8Q9UPN6 1271 aaKnown RBP16.16■□□□□ 0.18
SYP-203ENST00000466635 M0R2C6 588 aa16.15■□□□□ 0.18
SYP-203ENST00000466635 GPAA1O43292 621 aa16.15■□□□□ 0.18
SYP-203ENST00000466635 NF2P35240 595 aa16.15■□□□□ 0.18
SYP-203ENST00000466635 SUPT20HL1Q3ZLR7 823 aa16.15■□□□□ 0.18
SYP-203ENST00000466635 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
SYP-203ENST00000466635 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
SYP-203ENST00000466635 ZSCAN29Q8IWY8 852 aaPredicted RBP16.15■□□□□ 0.18
SYP-203ENST00000466635 FAM227BQ96M60 508 aa16.15■□□□□ 0.18
SYP-203ENST00000466635 STRBPQ96SI9 672 aaKnown RBP16.15■□□□□ 0.18
SYP-203ENST00000466635 FAM198AQ9UFP1 575 aa16.15■□□□□ 0.18
SYP-203ENST00000466635 SLC4A4Q9Y6R1 1079 aa16.15■□□□□ 0.18
SYP-203ENST00000466635 MYH2Q9UKX2 1941 aa16.14■□□□□ 0.17
SYP-203ENST00000466635 ADAMTSL1Q8N6G6 1762 aa16.14■□□□□ 0.17
SYP-203ENST00000466635 A0A0D9SFI3 127 aa16.14■□□□□ 0.17
SYP-203ENST00000466635 ITGBL1O95965 494 aaPredicted RBP16.14■□□□□ 0.17
SYP-203ENST00000466635 CHMLP26374 656 aa16.14■□□□□ 0.17
SYP-203ENST00000466635 MAPKAPK5Q8IW41 473 aa16.14■□□□□ 0.17
SYP-203ENST00000466635 HOOK2Q96ED9 719 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms