RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 RGS19P49795 217 aa21.67■■□□□ 1.06
COL7A1-206ENST00000466591 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
COL7A1-206ENST00000466591 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
COL7A1-206ENST00000466591 CCDC102BQ68D86 513 aa21.67■■□□□ 1.06
COL7A1-206ENST00000466591 FBXO46Q6PJ61 603 aaPredicted RBP21.67■■□□□ 1.06
COL7A1-206ENST00000466591 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.67■■□□□ 1.06
COL7A1-206ENST00000466591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.67■■□□□ 1.06
COL7A1-206ENST00000466591 ZNF341Q9BYN7 854 aa21.67■■□□□ 1.06
COL7A1-206ENST00000466591 USP40Q9NVE5 1235 aa21.67■■□□□ 1.06
COL7A1-206ENST00000466591 DAGLAQ9Y4D2 1042 aa21.67■■□□□ 1.06
COL7A1-206ENST00000466591 ADORA1P30542 326 aa21.66■■□□□ 1.06
COL7A1-206ENST00000466591 GJA5P36382 358 aa21.66■■□□□ 1.06
COL7A1-206ENST00000466591 TFCP2Q12800 502 aa21.66■■□□□ 1.06
COL7A1-206ENST00000466591 G3BP1Q13283 466 aaKnown RBP eCLIP21.66■■□□□ 1.06
COL7A1-206ENST00000466591 CRHR2Q13324 411 aa21.66■■□□□ 1.06
COL7A1-206ENST00000466591 OS9Q13438 667 aaPredicted RBP21.66■■□□□ 1.06
COL7A1-206ENST00000466591 SPTY2D1Q68D10 685 aaPredicted RBP21.66■■□□□ 1.06
COL7A1-206ENST00000466591 MIGA2Q7L4E1 593 aa21.66■■□□□ 1.06
COL7A1-206ENST00000466591 R3HDMLQ9H3Y0 253 aa21.66■■□□□ 1.06
COL7A1-206ENST00000466591 A0A1B0GUL7 405 aa21.65■■□□□ 1.06
COL7A1-206ENST00000466591 TIMM10P62072 90 aa21.65■■□□□ 1.06
COL7A1-206ENST00000466591 TAF1CQ15572 869 aaPredicted RBP21.65■■□□□ 1.06
COL7A1-206ENST00000466591 ZSCAN29Q8IWY8 852 aaPredicted RBP21.65■■□□□ 1.06
COL7A1-206ENST00000466591 ZFYVE28Q9HCC9 887 aa21.65■■□□□ 1.06
COL7A1-206ENST00000466591 OTOFQ9HC10 1997 aa21.65■■□□□ 1.06
COL7A1-206ENST00000466591 ARHGEF6Q15052 776 aa21.64■■□□□ 1.05
COL7A1-206ENST00000466591 CDC42EP5Q6NZY7 148 aa21.64■■□□□ 1.05
COL7A1-206ENST00000466591 ERO1BQ86YB8 467 aa21.64■■□□□ 1.05
COL7A1-206ENST00000466591 FAM151AQ8WW52 585 aa21.64■■□□□ 1.05
COL7A1-206ENST00000466591 CNKSR2Q8WXI2 1034 aa21.64■■□□□ 1.05
COL7A1-206ENST00000466591 ZKSCAN4Q969J2 545 aaPredicted RBP21.64■■□□□ 1.05
COL7A1-206ENST00000466591 RPAP1Q9BWH6 1393 aaPredicted RBP21.63■■□□□ 1.05
COL7A1-206ENST00000466591 SALL1Q9NSC2 1324 aa21.63■■□□□ 1.05
COL7A1-206ENST00000466591 CETPP11597 493 aa21.63■■□□□ 1.05
COL7A1-206ENST00000466591 MIER1Q8N108 512 aa21.63■■□□□ 1.05
COL7A1-206ENST00000466591 XAGE2Q96GT9 111 aa21.63■■□□□ 1.05
COL7A1-206ENST00000466591 SPDYE5A6NIY4 337 aa21.62■■□□□ 1.05
COL7A1-206ENST00000466591 SP3Q02447 781 aa21.62■■□□□ 1.05
COL7A1-206ENST00000466591 SNAPC2Q13487 334 aa21.62■■□□□ 1.05
COL7A1-206ENST00000466591 ERICH6Q7L0X2 663 aa21.62■■□□□ 1.05
COL7A1-206ENST00000466591 CD99L2Q8TCZ2 262 aa21.62■■□□□ 1.05
COL7A1-206ENST00000466591 AK9Q5TCS8 1911 aa21.62■■□□□ 1.05
COL7A1-206ENST00000466591 TESPA1A2RU30 521 aaPredicted RBP21.61■■□□□ 1.05
COL7A1-206ENST00000466591 MTX1Q13505 466 aa21.61■■□□□ 1.05
COL7A1-206ENST00000466591 RASGRF1Q13972 1273 aa21.61■■□□□ 1.05
COL7A1-206ENST00000466591 TMEM57Q8N5G2 664 aa21.61■■□□□ 1.05
COL7A1-206ENST00000466591 BRI3BPQ8WY22 251 aa21.61■■□□□ 1.05
COL7A1-206ENST00000466591 EFCC1Q9HA90 598 aa21.61■■□□□ 1.05
COL7A1-206ENST00000466591 SNCAIPQ9Y6H5 919 aa21.61■■□□□ 1.05
COL7A1-206ENST00000466591 KIF22Q14807 665 aa21.6■■□□□ 1.05
COL7A1-206ENST00000466591 ITPRIPQ8IWB1 547 aa21.6■■□□□ 1.05
COL7A1-206ENST00000466591 MS4A4AQ96JQ5 239 aa21.6■■□□□ 1.05
COL7A1-206ENST00000466591 PTPN18Q99952 460 aa21.6■■□□□ 1.05
COL7A1-206ENST00000466591 TNNQ9UQP3 1299 aa21.6■■□□□ 1.05
COL7A1-206ENST00000466591 NFIAQ12857 509 aa21.59■■□□□ 1.05
COL7A1-206ENST00000466591 PPIL2Q13356 520 aa21.59■■□□□ 1.05
COL7A1-206ENST00000466591 OTOP1Q7RTM1 612 aa21.59■■□□□ 1.05
COL7A1-206ENST00000466591 NOL10Q9BSC4 688 aaKnown RBP21.59■■□□□ 1.05
COL7A1-206ENST00000466591 GSTO1P78417 241 aa21.58■■□□□ 1.05
COL7A1-206ENST00000466591 PICALMQ13492 652 aa21.58■■□□□ 1.05
COL7A1-206ENST00000466591 PICK1Q9NRD5 415 aa21.58■■□□□ 1.05
COL7A1-206ENST00000466591 RAI14Q9P0K7 980 aa21.58■■□□□ 1.05
COL7A1-206ENST00000466591 PDS5AQ29RF7 1337 aaKnown RBP21.57■■□□□ 1.04
COL7A1-206ENST00000466591 IRF6O14896 467 aa21.57■■□□□ 1.04
COL7A1-206ENST00000466591 INPP5BP32019 993 aa21.57■■□□□ 1.04
COL7A1-206ENST00000466591 BTDP43251 543 aa21.57■■□□□ 1.04
COL7A1-206ENST00000466591 RGS3P49796 1198 aa21.57■■□□□ 1.04
COL7A1-206ENST00000466591 PPATQ06203 517 aa21.57■■□□□ 1.04
COL7A1-206ENST00000466591 FAM43AQ8N2R8 423 aa21.57■■□□□ 1.04
COL7A1-206ENST00000466591 PNMA6EA0A0J9YXQ4 647 aa21.56■■□□□ 1.04
COL7A1-206ENST00000466591 LDHCP07864 332 aa21.56■■□□□ 1.04
COL7A1-206ENST00000466591 UQCRFS1P1P0C7P4 283 aa21.56■■□□□ 1.04
COL7A1-206ENST00000466591 TTC39AQ5SRH9 613 aa21.56■■□□□ 1.04
COL7A1-206ENST00000466591 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.56■■□□□ 1.04
COL7A1-206ENST00000466591 SPATA5Q8NB90 893 aa21.56■■□□□ 1.04
COL7A1-206ENST00000466591 LRP2BPQ9P2M1 347 aa21.56■■□□□ 1.04
COL7A1-206ENST00000466591 LAMB1P07942 1786 aa21.56■■□□□ 1.04
COL7A1-206ENST00000466591 MROH7-TTC4A0A0A0MT08 1334 aa21.55■■□□□ 1.04
COL7A1-206ENST00000466591 ENTPD3O75355 529 aa21.55■■□□□ 1.04
COL7A1-206ENST00000466591 CCDC158Q5M9N0 1113 aa21.55■■□□□ 1.04
COL7A1-206ENST00000466591 FAM198AQ9UFP1 575 aa21.55■■□□□ 1.04
COL7A1-206ENST00000466591 SURF6O75683 361 aaKnown RBP21.54■■□□□ 1.04
COL7A1-206ENST00000466591 MECOMQ03112 1051 aa21.54■■□□□ 1.04
COL7A1-206ENST00000466591 C1orf115Q9H7X2 142 aa21.54■■□□□ 1.04
COL7A1-206ENST00000466591 ZCCHC17Q9NP64 241 aaKnown RBP21.54■■□□□ 1.04
COL7A1-206ENST00000466591 PTPN22Q9Y2R2 807 aa21.54■■□□□ 1.04
COL7A1-206ENST00000466591 GAKO14976 1311 aa21.54■■□□□ 1.04
COL7A1-206ENST00000466591 MYH2Q9UKX2 1941 aa21.53■■□□□ 1.04
COL7A1-206ENST00000466591 BTBD19C9JJ37 291 aa21.53■■□□□ 1.04
COL7A1-206ENST00000466591 HMG20BQ9P0W2 317 aa21.53■■□□□ 1.04
COL7A1-206ENST00000466591 ECM2O94769 699 aaPredicted RBP21.52■■□□□ 1.04
COL7A1-206ENST00000466591 ZFPM1Q8IX07 1006 aa21.52■■□□□ 1.04
COL7A1-206ENST00000466591 IDI2Q9BXS1 227 aa21.52■■□□□ 1.04
COL7A1-206ENST00000466591 TLR2O60603 784 aa21.51■■□□□ 1.03
COL7A1-206ENST00000466591 TBC1D9Q6ZT07 1266 aa21.51■■□□□ 1.03
COL7A1-206ENST00000466591 NBPF11Q86T75 865 aa21.51■■□□□ 1.03
COL7A1-206ENST00000466591 PDHXO00330 501 aa21.5■■□□□ 1.03
COL7A1-206ENST00000466591 ZBTB22O15209 634 aa21.5■■□□□ 1.03
COL7A1-206ENST00000466591 ARID4AP29374 1257 aaPredicted RBP21.5■■□□□ 1.03
COL7A1-206ENST00000466591 SLC9C1Q4G0N8 1177 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms