RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
ABCF3-205ENST00000466416 ZNF341Q9BYN7 854 aa11.78□□□□□ -0.52
ABCF3-205ENST00000466416 UBE2OQ9C0C9 1292 aaKnown RBP11.78□□□□□ -0.52
ABCF3-205ENST00000466416 NBPF3Q9H094 633 aa11.78□□□□□ -0.52
ABCF3-205ENST00000466416 IFT57Q9NWB7 429 aa11.78□□□□□ -0.52
ABCF3-205ENST00000466416 TMOD2Q9NZR1 351 aa11.78□□□□□ -0.52
ABCF3-205ENST00000466416 POTEB2H3BUK9 544 aa11.77□□□□□ -0.53
ABCF3-205ENST00000466416 CXCL11O14625 94 aa11.77□□□□□ -0.53
ABCF3-205ENST00000466416 HIBADHP31937 336 aaKnown RBP11.77□□□□□ -0.53
ABCF3-205ENST00000466416 GNAI1P63096 354 aa11.77□□□□□ -0.53
ABCF3-205ENST00000466416 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
ABCF3-205ENST00000466416 MOGSQ13724 837 aa11.77□□□□□ -0.53
ABCF3-205ENST00000466416 GCKRQ14397 625 aa11.77□□□□□ -0.53
ABCF3-205ENST00000466416 CASP7P55210 303 aa11.76□□□□□ -0.53
ABCF3-205ENST00000466416 C8orf58Q8NAV2 365 aa11.76□□□□□ -0.53
ABCF3-205ENST00000466416 DIS3LQ8TF46 1054 aaKnown RBP11.76□□□□□ -0.53
ABCF3-205ENST00000466416 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
ABCF3-205ENST00000466416 ZNF112Q9UJU3 913 aa11.76□□□□□ -0.53
ABCF3-205ENST00000466416 TNPO2O14787 897 aaKnown RBP11.75□□□□□ -0.53
ABCF3-205ENST00000466416 CYP2C8P10632 490 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 SYN1P17600 705 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 INPP5BP32019 993 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 CACNB3P54284 484 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 UBE4AQ14139 1066 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 GPAT2Q6NUI2 795 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 MIGA2Q7L4E1 593 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 FASTKD5Q7L8L6 764 aaKnown RBP11.75□□□□□ -0.53
ABCF3-205ENST00000466416 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 COA7Q96BR5 231 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 FAM84BQ96KN1 310 aaPredicted RBP11.75□□□□□ -0.53
ABCF3-205ENST00000466416 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 GUCD1Q96NT3 240 aa11.75□□□□□ -0.53
ABCF3-205ENST00000466416 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.75□□□□□ -0.53
ABCF3-205ENST00000466416 ARAP2Q8WZ64 1704 aa11.74□□□□□ -0.53
ABCF3-205ENST00000466416 PLIN1O60240 522 aa11.74□□□□□ -0.53
ABCF3-205ENST00000466416 RALBP1Q15311 655 aa11.74□□□□□ -0.53
ABCF3-205ENST00000466416 NOL9Q5SY16 702 aaKnown RBP11.74□□□□□ -0.53
ABCF3-205ENST00000466416 LDHAL6AQ6ZMR3 332 aa11.74□□□□□ -0.53
ABCF3-205ENST00000466416 TBC1D22AQ8WUA7 517 aa11.74□□□□□ -0.53
ABCF3-205ENST00000466416 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
ABCF3-205ENST00000466416 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
ABCF3-205ENST00000466416 C11orf49Q9H6J7 331 aa11.74□□□□□ -0.53
ABCF3-205ENST00000466416 SLC45A1Q9Y2W3 748 aa11.74□□□□□ -0.53
ABCF3-205ENST00000466416 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
ABCF3-205ENST00000466416 GYG1P46976 350 aa11.73□□□□□ -0.53
ABCF3-205ENST00000466416 CNNM1Q9NRU3 951 aa11.73□□□□□ -0.53
ABCF3-205ENST00000466416 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
ABCF3-205ENST00000466416 HMGCRP04035 888 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 FOXO4P98177 505 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 WDR43Q15061 677 aaKnown RBP eCLIP11.72□□□□□ -0.53
ABCF3-205ENST00000466416 CCDC57Q2TAC2 916 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 TAF7LQ5H9L4 462 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 APOBEC3HQ6NTF7 200 aaKnown RBP11.72□□□□□ -0.53
ABCF3-205ENST00000466416 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 FAM151AQ8WW52 585 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
ABCF3-205ENST00000466416 SUGT1Q9Y2Z0 365 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 ALPK3Q96L96 1907 aa11.72□□□□□ -0.53
ABCF3-205ENST00000466416 MAST3O60307 1309 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 A0A0G2JLL6 359 aaPredicted RBP11.71□□□□□ -0.53
ABCF3-205ENST00000466416 COL9A1P20849 921 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 GRIK5Q16478 980 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 ZNF697Q5TEC3 545 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 HHIPL2Q6UWX4 724 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 PRRT2Q7Z6L0 340 aaPredicted RBP11.71□□□□□ -0.53
ABCF3-205ENST00000466416 FBXO33Q7Z6M2 555 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 VPS37DQ86XT2 251 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 SMCR8Q8TEV9 937 aaPredicted RBP11.71□□□□□ -0.53
ABCF3-205ENST00000466416 OGDHLQ9ULD0 1010 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 TTC28Q96AY4 2481 aa11.71□□□□□ -0.53
ABCF3-205ENST00000466416 MGAMO43451 1857 aa11.7□□□□□ -0.54
ABCF3-205ENST00000466416 FRAT2O75474 233 aaPredicted RBP11.7□□□□□ -0.54
ABCF3-205ENST00000466416 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
ABCF3-205ENST00000466416 ZEB1P37275 1124 aaPredicted RBP11.7□□□□□ -0.54
ABCF3-205ENST00000466416 G2E3Q7L622 706 aa11.7□□□□□ -0.54
ABCF3-205ENST00000466416 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
ABCF3-205ENST00000466416 DNAAF4Q8WXU2 420 aa11.7□□□□□ -0.54
ABCF3-205ENST00000466416 FAM161BQ96MY7 647 aa11.7□□□□□ -0.54
ABCF3-205ENST00000466416 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
ABCF3-205ENST00000466416 ZHX2Q9Y6X8 837 aa11.7□□□□□ -0.54
ABCF3-205ENST00000466416 VCANP13611 3396 aa11.69□□□□□ -0.54
ABCF3-205ENST00000466416 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
ABCF3-205ENST00000466416 LMBR1LQ6UX01 489 aa11.69□□□□□ -0.54
ABCF3-205ENST00000466416 GADL1Q6ZQY3 521 aa11.69□□□□□ -0.54
ABCF3-205ENST00000466416 MAFAQ8NHW3 353 aaPredicted RBP11.69□□□□□ -0.54
ABCF3-205ENST00000466416 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
ABCF3-205ENST00000466416 CDX2Q99626 313 aaPredicted RBP11.69□□□□□ -0.54
ABCF3-205ENST00000466416 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
ABCF3-205ENST00000466416 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
ABCF3-205ENST00000466416 FAM110CQ1W6H9 321 aa11.68□□□□□ -0.54
ABCF3-205ENST00000466416 CAVIN4Q5BKX8 364 aa11.68□□□□□ -0.54
ABCF3-205ENST00000466416 ANKRD13CQ8N6S4 541 aa11.68□□□□□ -0.54
ABCF3-205ENST00000466416 AFG3L2Q9Y4W6 797 aa11.68□□□□□ -0.54
ABCF3-205ENST00000466416 PFASO15067 1338 aa11.67□□□□□ -0.54
ABCF3-205ENST00000466416 COL6A1P12109 1028 aa11.67□□□□□ -0.54
ABCF3-205ENST00000466416 PTPRAP18433 802 aa11.67□□□□□ -0.54
ABCF3-205ENST00000466416 FLIIQ13045 1269 aa11.67□□□□□ -0.54
ABCF3-205ENST00000466416 SCYL3Q8IZE3 742 aa11.67□□□□□ -0.54
ABCF3-205ENST00000466416 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms