RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 RXRAP19793 462 aa15.93■□□□□ 0.14
UBE4B-206ENST00000466379 GUCY1B3Q02153 619 aa15.93■□□□□ 0.14
UBE4B-206ENST00000466379 DDR1Q08345 913 aa15.93■□□□□ 0.14
UBE4B-206ENST00000466379 RRP12Q5JTH9 1297 aaKnown RBP15.93■□□□□ 0.14
UBE4B-206ENST00000466379 NAA16Q6N069 864 aaPredicted RBP15.93■□□□□ 0.14
UBE4B-206ENST00000466379 SMIM22K7EJ46 135 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 PDIA4P13667 645 aaKnown RBP15.92■□□□□ 0.14
UBE4B-206ENST00000466379 FDPSP14324 419 aaKnown RBP15.92■□□□□ 0.14
UBE4B-206ENST00000466379 UBE2HP62256 183 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 KRT85P78386 507 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 HMGN5P82970 282 aaKnown RBP15.92■□□□□ 0.14
UBE4B-206ENST00000466379 TTC6Q86TZ1 520 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 RPGRQ92834 1020 aaKnown RBP15.92■□□□□ 0.14
UBE4B-206ENST00000466379 NACAP1Q9BZK3 213 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 WDR19Q8NEZ3 1342 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 KDM4AO75164 1064 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 ST5P78524 1137 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 RIOK1Q9BRS2 568 aaKnown RBP15.92■□□□□ 0.14
UBE4B-206ENST00000466379 TOMM22Q9NS69 142 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 ANGEL1Q9UNK9 670 aaKnown RBP15.92■□□□□ 0.14
UBE4B-206ENST00000466379 TIAM2Q8IVF5 1701 aa15.92■□□□□ 0.14
UBE4B-206ENST00000466379 PRDX5P30044 214 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 MECOMQ03112 1051 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 AKNAD1Q5T1N1 836 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 ZSWIM5Q9P217 1185 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 MINDY4BA8MYZ0 360 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 SEMA3EO15041 775 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 RBM6P78332 1123 aaKnown RBP15.91■□□□□ 0.14
UBE4B-206ENST00000466379 MFSD6Q6ZSS7 791 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 CCDC144CPQ8IYA2 1237 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 NSUN4Q96CB9 384 aaKnown RBP15.91■□□□□ 0.14
UBE4B-206ENST00000466379 ZKSCAN3Q9BRR0 538 aa15.91■□□□□ 0.14
UBE4B-206ENST00000466379 GPSM2P81274 684 aa15.9■□□□□ 0.14
UBE4B-206ENST00000466379 CSPP1Q1MSJ5 1256 aa15.9■□□□□ 0.14
UBE4B-206ENST00000466379 TMEM67Q5HYA8 995 aa15.9■□□□□ 0.14
UBE4B-206ENST00000466379 LRSAM1Q6UWE0 723 aa15.9■□□□□ 0.14
UBE4B-206ENST00000466379 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
UBE4B-206ENST00000466379 MYL10Q9BUA6 226 aa15.9■□□□□ 0.14
UBE4B-206ENST00000466379 RBSNQ9H1K0 784 aa15.9■□□□□ 0.14
UBE4B-206ENST00000466379 CYP2D7A0A087X1C5 515 aa15.89■□□□□ 0.13
UBE4B-206ENST00000466379 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
UBE4B-206ENST00000466379 PPARAQ07869 468 aa15.89■□□□□ 0.13
UBE4B-206ENST00000466379 OTUD7BQ6GQQ9 843 aa15.89■□□□□ 0.13
UBE4B-206ENST00000466379 LY9Q9HBG7 655 aa15.89■□□□□ 0.13
UBE4B-206ENST00000466379 NFXL1Q6ZNB6 911 aa15.89■□□□□ 0.13
UBE4B-206ENST00000466379 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
UBE4B-206ENST00000466379 STAG1Q8WVM7 1258 aa15.89■□□□□ 0.13
UBE4B-206ENST00000466379 SYAP1Q96A49 352 aaPredicted RBP15.89■□□□□ 0.13
UBE4B-206ENST00000466379 AATFQ9NY61 560 aaKnown RBP eCLIP15.89■□□□□ 0.13
UBE4B-206ENST00000466379 BAZ2AQ9UIF9 1905 aaKnown RBP15.89■□□□□ 0.13
UBE4B-206ENST00000466379 CPLX1O14810 134 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 IFIT3O14879 490 aaKnown RBP15.88■□□□□ 0.13
UBE4B-206ENST00000466379 APBA3O96018 575 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 CRY2Q49AN0 593 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 TMEM87BQ96K49 555 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 GJB4Q9NTQ9 266 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 KIF3AQ9Y496 699 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 XDHP47989 1333 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 ADD1P35611 737 aaKnown RBP15.88■□□□□ 0.13
UBE4B-206ENST00000466379 METAP2P50579 478 aaKnown RBP eCLIP15.88■□□□□ 0.13
UBE4B-206ENST00000466379 CEBPZQ03701 1054 aaKnown RBP15.88■□□□□ 0.13
UBE4B-206ENST00000466379 ZNF772Q68DY9 489 aaPredicted RBP15.88■□□□□ 0.13
UBE4B-206ENST00000466379 APOA5Q6Q788 366 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 LEO1Q8WVC0 666 aaPredicted RBP15.88■□□□□ 0.13
UBE4B-206ENST00000466379 SPATA32Q96LK8 384 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 KRT23Q9C075 422 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 LEMD3Q9Y2U8 911 aa15.88■□□□□ 0.13
UBE4B-206ENST00000466379 CDC27P30260 824 aa15.87■□□□□ 0.13
UBE4B-206ENST00000466379 NASPP49321 788 aaPredicted RBP15.87■□□□□ 0.13
UBE4B-206ENST00000466379 EVX2Q03828 476 aa15.87■□□□□ 0.13
UBE4B-206ENST00000466379 RBM17Q96I25 401 aaKnown RBP15.87■□□□□ 0.13
UBE4B-206ENST00000466379 FTOQ9C0B1 505 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBE4B-206ENST00000466379 CNNM2Q9H8M5 875 aa15.87■□□□□ 0.13
UBE4B-206ENST00000466379 ORC3Q9UBD5 711 aaPredicted RBP15.87■□□□□ 0.13
UBE4B-206ENST00000466379 PDS5AQ29RF7 1337 aaKnown RBP15.87■□□□□ 0.13
UBE4B-206ENST00000466379 DHX16O60231 1041 aaKnown RBP15.87■□□□□ 0.13
UBE4B-206ENST00000466379 CCDC183Q5T5S1 534 aa15.87■□□□□ 0.13
UBE4B-206ENST00000466379 ZSCAN16Q9H4T2 348 aaPredicted RBP15.87■□□□□ 0.13
UBE4B-206ENST00000466379 MYH15Q9Y2K3 1946 aa15.86■□□□□ 0.13
UBE4B-206ENST00000466379 UFL1O94874 794 aa15.86■□□□□ 0.13
UBE4B-206ENST00000466379 GRIK5Q16478 980 aa15.86■□□□□ 0.13
UBE4B-206ENST00000466379 COL23A1Q86Y22 540 aaPredicted RBP15.86■□□□□ 0.13
UBE4B-206ENST00000466379 CHMP4CQ96CF2 233 aa15.86■□□□□ 0.13
UBE4B-206ENST00000466379 ELP1O95163 1332 aa15.86■□□□□ 0.13
UBE4B-206ENST00000466379 ZBTB43O43298 467 aa15.85■□□□□ 0.13
UBE4B-206ENST00000466379 AIFM3Q96NN9 605 aa15.85■□□□□ 0.13
UBE4B-206ENST00000466379 SCAND2PQ9GZW5 306 aaPredicted RBP15.85■□□□□ 0.13
UBE4B-206ENST00000466379 MAST2Q6P0Q8 1798 aa15.85■□□□□ 0.13
UBE4B-206ENST00000466379 GOLGA8AA7E2F4 631 aa15.85■□□□□ 0.13
UBE4B-206ENST00000466379 ILDR1Q86SU0 546 aaPredicted RBP15.85■□□□□ 0.13
UBE4B-206ENST00000466379 DZIP1Q86YF9 867 aaKnown RBP15.85■□□□□ 0.13
UBE4B-206ENST00000466379 RNF214Q8ND24 703 aa15.85■□□□□ 0.13
UBE4B-206ENST00000466379 PHKBQ93100 1093 aa15.85■□□□□ 0.13
UBE4B-206ENST00000466379 C8orf76Q96K31 380 aa15.85■□□□□ 0.13
UBE4B-206ENST00000466379 CCDC88AQ3V6T2 1871 aa15.85■□□□□ 0.13
UBE4B-206ENST00000466379 CCDC69A6NI79 296 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 PRDM1O75626 825 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 LIG1P18858 919 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms