RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 SDR42E1Q8WUS8 393 aa25.86■■□□□ 1.73
ITGA4-204ENST00000465522 PSME4Q14997 1843 aa25.86■■□□□ 1.73
ITGA4-204ENST00000465522 GPR75-ASB3A0A0A6YYF3 556 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 KRT32Q14532 448 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 CERS3Q8IU89 383 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 ZNF213O14771 459 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 VIL1P09327 827 aaKnown RBP25.85■■□□□ 1.73
ITGA4-204ENST00000465522 BTDP43251 543 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 TDO2P48775 406 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 SCNN1DP51172 638 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 NEK4P51957 841 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 ADCK5Q3MIX3 580 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 EPB41L4AQ9HCS5 686 aaPredicted RBP25.85■■□□□ 1.73
ITGA4-204ENST00000465522 TAF6LQ9Y6J9 622 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 GAKO14976 1311 aa25.85■■□□□ 1.73
ITGA4-204ENST00000465522 ZNF646O15015 1829 aaPredicted RBP25.84■■□□□ 1.73
ITGA4-204ENST00000465522 PSMD14O00487 310 aa25.84■■□□□ 1.73
ITGA4-204ENST00000465522 PSMA5P28066 241 aa25.84■■□□□ 1.73
ITGA4-204ENST00000465522 RSBN1LQ6PCB5 846 aaPredicted RBP25.84■■□□□ 1.73
ITGA4-204ENST00000465522 JAKMIP1Q96N16 626 aaKnown RBP25.84■■□□□ 1.73
ITGA4-204ENST00000465522 MRIQ9BWK5 157 aa25.84■■□□□ 1.73
ITGA4-204ENST00000465522 ZMYM6O95789 1325 aa25.84■■□□□ 1.73
ITGA4-204ENST00000465522 BECN1Q14457 450 aa25.83■■□□□ 1.73
ITGA4-204ENST00000465522 HHIPL2Q6UWX4 724 aa25.83■■□□□ 1.73
ITGA4-204ENST00000465522 TEKT1Q969V4 418 aa25.83■■□□□ 1.73
ITGA4-204ENST00000465522 TM6SF1Q9BZW5 370 aa25.83■■□□□ 1.73
ITGA4-204ENST00000465522 DAGLAQ9Y4D2 1042 aa25.83■■□□□ 1.73
ITGA4-204ENST00000465522 MYO3BQ8WXR4 1341 aa25.83■■□□□ 1.73
ITGA4-204ENST00000465522 UTRNP46939 3433 aa25.83■■□□□ 1.72
ITGA4-204ENST00000465522 ST18O60284 1047 aa25.83■■□□□ 1.72
ITGA4-204ENST00000465522 PLCG2P16885 1265 aa25.83■■□□□ 1.72
ITGA4-204ENST00000465522 CASTP20810 708 aaKnown RBP25.83■■□□□ 1.72
ITGA4-204ENST00000465522 HAND2P61296 217 aa25.83■■□□□ 1.72
ITGA4-204ENST00000465522 SH3RF3Q8TEJ3 882 aaPredicted RBP25.83■■□□□ 1.72
ITGA4-204ENST00000465522 UPF3BQ9BZI7 483 aaKnown RBP25.83■■□□□ 1.72
ITGA4-204ENST00000465522 CXCL9Q07325 125 aa25.82■■□□□ 1.72
ITGA4-204ENST00000465522 GIMAP6Q6P9H5 292 aa25.82■■□□□ 1.72
ITGA4-204ENST00000465522 ATP8A2Q9NTI2 1148 aa25.82■■□□□ 1.72
ITGA4-204ENST00000465522 HDLBPQ00341 1268 aaKnown RBP25.81■■□□□ 1.72
ITGA4-204ENST00000465522 SNX21Q969T3 373 aa25.81■■□□□ 1.72
ITGA4-204ENST00000465522 CRKP46108 304 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 PRELPP51888 382 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 CIAPIN1Q6FI81 312 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 IL27Q8NEV9 243 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 ZSWIM6Q9HCJ5 1215 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 DAXXQ9UER7 740 aaPredicted RBP25.8■■□□□ 1.72
ITGA4-204ENST00000465522 E7EWF7 191 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 USP5P45974 858 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 TNIP1Q15025 636 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 CYP46A1Q9Y6A2 500 aa25.8■■□□□ 1.72
ITGA4-204ENST00000465522 RBM5P52756 815 aaKnown RBP eCLIP25.79■■□□□ 1.72
ITGA4-204ENST00000465522 HSCBQ8IWL3 235 aa25.79■■□□□ 1.72
ITGA4-204ENST00000465522 NEK1Q96PY6 1258 aa25.79■■□□□ 1.72
ITGA4-204ENST00000465522 TBC1D2Q9BYX2 928 aa25.79■■□□□ 1.72
ITGA4-204ENST00000465522 DCP1AQ9NPI6 582 aaPredicted RBP25.79■■□□□ 1.72
ITGA4-204ENST00000465522 SERPINA10Q9UK55 444 aa25.79■■□□□ 1.72
ITGA4-204ENST00000465522 BAZ2AQ9UIF9 1905 aaKnown RBP25.78■■□□□ 1.72
ITGA4-204ENST00000465522 BLOC1S2Q6QNY1 142 aa25.78■■□□□ 1.72
ITGA4-204ENST00000465522 RUFY3Q7L099 469 aa25.78■■□□□ 1.72
ITGA4-204ENST00000465522 TEX11Q8IYF3 940 aa25.78■■□□□ 1.72
ITGA4-204ENST00000465522 ZBTB12Q9Y330 459 aaPredicted RBP25.78■■□□□ 1.72
ITGA4-204ENST00000465522 CPA1P15085 419 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 LMNB1P20700 586 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 EIF6P56537 245 aaKnown RBP25.77■■□□□ 1.72
ITGA4-204ENST00000465522 RHBDL3P58872 404 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 STOX1Q6ZVD7 989 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 AGBL3Q8NEM8 1001 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 TGFBRAP1Q8WUH2 860 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 ZDHHC15Q96MV8 337 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 GMLQ99445 158 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 CD2BP2O95400 341 aaKnown RBP25.77■■□□□ 1.72
ITGA4-204ENST00000465522 YBX3P16989 372 aaKnown RBP eCLIP25.77■■□□□ 1.72
ITGA4-204ENST00000465522 OGFOD1Q8N543 542 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 HDAC9Q9UKV0 1011 aa25.77■■□□□ 1.72
ITGA4-204ENST00000465522 MINDY4BA8MYZ0 360 aa25.76■■□□□ 1.71
ITGA4-204ENST00000465522 FZD9O00144 591 aa25.76■■□□□ 1.71
ITGA4-204ENST00000465522 APOBEC3HQ6NTF7 200 aaKnown RBP25.76■■□□□ 1.71
ITGA4-204ENST00000465522 USP17L12C9JPN9 530 aa25.75■■□□□ 1.71
ITGA4-204ENST00000465522 USP17L21D6R901 530 aa25.75■■□□□ 1.71
ITGA4-204ENST00000465522 HMGB1P09429 215 aaKnown RBP25.75■■□□□ 1.71
ITGA4-204ENST00000465522 SLC4A3P48751 1232 aa25.75■■□□□ 1.71
ITGA4-204ENST00000465522 CTR9Q6PD62 1173 aa25.75■■□□□ 1.71
ITGA4-204ENST00000465522 USP40Q9NVE5 1235 aa25.75■■□□□ 1.71
ITGA4-204ENST00000465522 MCM9Q9NXL9 1143 aa25.75■■□□□ 1.71
ITGA4-204ENST00000465522 CTDSPL2Q05D32 466 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 PPARAQ07869 468 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 NBPF3Q9H094 633 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 PDRG1Q9NUG6 133 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 MKRN1Q9UHC7 482 aaKnown RBP25.74■■□□□ 1.71
ITGA4-204ENST00000465522 LAMA4Q16363 1823 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 SBF1O95248 1867 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 RPS6KB1P23443 525 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 TRDNQ13061 729 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 CFAP100Q494V2 611 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 MAPKAPK5Q8IW41 473 aa25.74■■□□□ 1.71
ITGA4-204ENST00000465522 CDK5RAP2Q96SN8 1893 aa25.73■■□□□ 1.71
ITGA4-204ENST00000465522 USP17L8P0C7I0 530 aa25.73■■□□□ 1.71
ITGA4-204ENST00000465522 CDC42EP5Q6NZY7 148 aa25.73■■□□□ 1.71
ITGA4-204ENST00000465522 TBC1D10CQ8IV04 446 aa25.73■■□□□ 1.71
ITGA4-204ENST00000465522 NCOA7Q8NI08 942 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms