RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 RAB6AP20340 208 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 ZNF157P51786 506 aaPredicted RBP5.63□□□□□ -1.51
SNX4-202ENST00000465505 AP3B2Q13367 1082 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 GRM2Q14416 872 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 DUSP27Q5VZP5 1158 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 ABI1Q8IZP0 508 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 CCER1Q8TC90 406 aaPredicted RBP5.63□□□□□ -1.51
SNX4-202ENST00000465505 EPS8L3Q8TE67 593 aaKnown RBP5.63□□□□□ -1.51
SNX4-202ENST00000465505 WDR89Q96FK6 387 aaPredicted RBP5.63□□□□□ -1.51
SNX4-202ENST00000465505 DMRTB1Q96MA1 342 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 CSRNP1Q96S65 589 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 ARID3AQ99856 593 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 PPP1R9AQ9ULJ8 1098 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 AP4E1Q9UPM8 1137 aa5.63□□□□□ -1.51
SNX4-202ENST00000465505 LIG1P18858 919 aa5.62□□□□□ -1.51
SNX4-202ENST00000465505 TXKP42681 527 aa5.62□□□□□ -1.51
SNX4-202ENST00000465505 PDE4CQ08493 712 aa5.62□□□□□ -1.51
SNX4-202ENST00000465505 ZNF765Q7L2R6 523 aa5.62□□□□□ -1.51
SNX4-202ENST00000465505 CCDC86Q9H6F5 360 aaKnown RBP5.62□□□□□ -1.51
SNX4-202ENST00000465505 BSDC1Q9NW68 430 aaPredicted RBP5.62□□□□□ -1.51
SNX4-202ENST00000465505 ANGEL1Q9UNK9 670 aaKnown RBP5.62□□□□□ -1.51
SNX4-202ENST00000465505 TRAK1Q9UPV9 953 aa5.62□□□□□ -1.51
SNX4-202ENST00000465505 SOWAHDA6NJG2 315 aa5.61□□□□□ -1.51
SNX4-202ENST00000465505 CYP27A1Q02318 531 aa5.61□□□□□ -1.51
SNX4-202ENST00000465505 PDE3AQ14432 1141 aa5.61□□□□□ -1.51
SNX4-202ENST00000465505 OGFOD3Q6PK18 319 aa5.61□□□□□ -1.51
SNX4-202ENST00000465505 ZC3H7BQ9UGR2 993 aaKnown RBP5.61□□□□□ -1.51
SNX4-202ENST00000465505 RNF114Q9Y508 228 aa5.61□□□□□ -1.51
SNX4-202ENST00000465505 SUPT5HO00267 1087 aaKnown RBP5.6□□□□□ -1.51
SNX4-202ENST00000465505 TMPRSS2O15393 492 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 ZNF862O60290 1169 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 COL19A1Q14993 1142 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 CBLL1Q75N03 491 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 VSIG10LQ86VR7 867 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 FBXL18Q96ME1 805 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 ZC3H12CQ9C0D7 883 aaKnown RBP5.6□□□□□ -1.51
SNX4-202ENST00000465505 LGR6Q9HBX8 967 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 CRIM1Q9NZV1 1036 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 DAGLAQ9Y4D2 1042 aa5.6□□□□□ -1.51
SNX4-202ENST00000465505 GSTP1P09211 210 aaKnown RBP5.59□□□□□ -1.51
SNX4-202ENST00000465505 SLFN14P0C7P3 912 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 FCGRTP55899 365 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 DSC3Q14574 896 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 KIF4BQ2VIQ3 1234 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 PI16Q6UXB8 463 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 TMC7Q7Z402 723 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 FANCD2OSQ96PS1 177 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 LRRC4CQ9HCJ2 640 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 DISC1Q9NRI5 854 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 TMEM39AQ9NV64 488 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 PPP4R2Q9NY27 417 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 PCDHGC5Q9Y5F6 944 aa5.59□□□□□ -1.51
SNX4-202ENST00000465505 DTHD1Q6ZMT9 781 aa5.58□□□□□ -1.52
SNX4-202ENST00000465505 PDZD3Q86UT5 571 aa5.58□□□□□ -1.52
SNX4-202ENST00000465505 TP53INP2Q8IXH6 220 aa5.58□□□□□ -1.52
SNX4-202ENST00000465505 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
SNX4-202ENST00000465505 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
SNX4-202ENST00000465505 BCO2Q9BYV7 579 aa5.58□□□□□ -1.52
SNX4-202ENST00000465505 PAK6Q9NQU5 681 aaPredicted RBP5.58□□□□□ -1.52
SNX4-202ENST00000465505 KRT82Q9NSB4 513 aa5.58□□□□□ -1.52
SNX4-202ENST00000465505 NLRP2Q9NX02 1062 aa5.58□□□□□ -1.52
SNX4-202ENST00000465505 GNEQ9Y223 722 aaKnown RBP5.58□□□□□ -1.52
SNX4-202ENST00000465505 XRCC5P13010 732 aaKnown RBP5.57□□□□□ -1.52
SNX4-202ENST00000465505 PLCB3Q01970 1234 aa5.57□□□□□ -1.52
SNX4-202ENST00000465505 ID3Q02535 119 aa5.57□□□□□ -1.52
SNX4-202ENST00000465505 PPP2R3AQ06190 1150 aa5.57□□□□□ -1.52
SNX4-202ENST00000465505 STK35Q8TDR2 534 aa5.57□□□□□ -1.52
SNX4-202ENST00000465505 ATXN3LQ9H3M9 355 aa5.57□□□□□ -1.52
SNX4-202ENST00000465505 DCTN4Q9UJW0 460 aa5.57□□□□□ -1.52
SNX4-202ENST00000465505 TTLL4Q14679 1199 aa5.56□□□□□ -1.52
SNX4-202ENST00000465505 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.56□□□□□ -1.52
SNX4-202ENST00000465505 CYP27C1Q4G0S4 372 aa5.56□□□□□ -1.52
SNX4-202ENST00000465505 NXPE4Q6UWF7 544 aa5.56□□□□□ -1.52
SNX4-202ENST00000465505 SMYD4Q8IYR2 804 aaPredicted RBP5.56□□□□□ -1.52
SNX4-202ENST00000465505 BCL7CQ8WUZ0 217 aaPredicted RBP5.56□□□□□ -1.52
SNX4-202ENST00000465505 GPN3Q9UHW5 284 aaPredicted RBP5.56□□□□□ -1.52
SNX4-202ENST00000465505 TREHO43280 583 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 ARNTP27540 789 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 CDK5R2Q13319 367 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 ZC3H12AQ5D1E8 599 aaKnown RBP5.55□□□□□ -1.52
SNX4-202ENST00000465505 WFDC3Q8IUB2 231 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 AGBL5Q8NDL9 886 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 FLCNQ8NFG4 579 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 KCNB2Q92953 911 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 PIDD1Q9HB75 910 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 BIN2Q9UBW5 565 aaPredicted RBP5.55□□□□□ -1.52
SNX4-202ENST00000465505 AKAP2Q9Y2D5 859 aa5.55□□□□□ -1.52
SNX4-202ENST00000465505 RNGTTO60942 597 aaKnown RBP5.54□□□□□ -1.52
SNX4-202ENST00000465505 BRD1O95696 1058 aa5.54□□□□□ -1.52
SNX4-202ENST00000465505 FAM87AP0C7U9 286 aa5.54□□□□□ -1.52
SNX4-202ENST00000465505 HCLS1P14317 486 aaPredicted RBP5.54□□□□□ -1.52
SNX4-202ENST00000465505 ITGB5P18084 799 aa5.54□□□□□ -1.52
SNX4-202ENST00000465505 ENOX2Q16206 610 aaKnown RBP5.54□□□□□ -1.52
SNX4-202ENST00000465505 SPRED2Q7Z698 418 aa5.54□□□□□ -1.52
SNX4-202ENST00000465505 SULF2Q8IWU5 870 aa5.54□□□□□ -1.52
SNX4-202ENST00000465505 CACNA2D2Q9NY47 1150 aa5.54□□□□□ -1.52
SNX4-202ENST00000465505 PCOLCE2Q9UKZ9 415 aa5.54□□□□□ -1.52
SNX4-202ENST00000465505 SLC5A6Q9Y289 635 aa5.54□□□□□ -1.52
SNX4-202ENST00000465505 PNMA6FA0A0J9YX94 578 aa5.53□□□□□ -1.52
SNX4-202ENST00000465505 NEFMP07197 916 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms