RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.13■□□□□ 0.65
HDAC6-214ENST00000465269 MGAMO43451 1857 aa19.13■□□□□ 0.65
HDAC6-214ENST00000465269 BCRP11274 1271 aa19.12■□□□□ 0.65
HDAC6-214ENST00000465269 FLT3LGP49771 235 aa19.12■□□□□ 0.65
HDAC6-214ENST00000465269 FCGRTP55899 365 aa19.12■□□□□ 0.65
HDAC6-214ENST00000465269 GNAI1P63096 354 aa19.12■□□□□ 0.65
HDAC6-214ENST00000465269 FOXO4P98177 505 aa19.12■□□□□ 0.65
HDAC6-214ENST00000465269 CHAF1AQ13111 956 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-214ENST00000465269 TAOK2Q9UL54 1235 aa19.12■□□□□ 0.65
HDAC6-214ENST00000465269 MAGEA10P43363 369 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-214ENST00000465269 PPATQ06203 517 aa19.11■□□□□ 0.65
HDAC6-214ENST00000465269 IFIT5Q13325 482 aaKnown RBP19.11■□□□□ 0.65
HDAC6-214ENST00000465269 WDR43Q15061 677 aaKnown RBP eCLIP19.11■□□□□ 0.65
HDAC6-214ENST00000465269 EPHA10Q5JZY3 1008 aa19.11■□□□□ 0.65
HDAC6-214ENST00000465269 BMP8BP34820 402 aa19.1■□□□□ 0.65
HDAC6-214ENST00000465269 GPAT2Q6NUI2 795 aa19.1■□□□□ 0.65
HDAC6-214ENST00000465269 TSR2Q969E8 191 aaKnown RBP19.1■□□□□ 0.65
HDAC6-214ENST00000465269 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-214ENST00000465269 APAF1O14727 1248 aa19.09■□□□□ 0.65
HDAC6-214ENST00000465269 HIBADHP31937 336 aaKnown RBP19.09■□□□□ 0.65
HDAC6-214ENST00000465269 GPR153Q6NV75 609 aa19.09■□□□□ 0.65
HDAC6-214ENST00000465269 PAK6Q9NQU5 681 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-214ENST00000465269 CNNM1Q9NRU3 951 aa19.09■□□□□ 0.65
HDAC6-214ENST00000465269 KCNH4Q9UQ05 1017 aa19.09■□□□□ 0.65
HDAC6-214ENST00000465269 DNAH12Q6ZR08 3092 aa19.09■□□□□ 0.65
HDAC6-214ENST00000465269 LRIT3Q3SXY7 679 aa19.08■□□□□ 0.64
HDAC6-214ENST00000465269 LMBR1LQ6UX01 489 aa19.08■□□□□ 0.64
HDAC6-214ENST00000465269 LDHAL6AQ6ZMR3 332 aa19.08■□□□□ 0.64
HDAC6-214ENST00000465269 NECAB2Q7Z6G3 386 aa19.08■□□□□ 0.64
HDAC6-214ENST00000465269 STK31Q9BXU1 1019 aa19.08■□□□□ 0.64
HDAC6-214ENST00000465269 ZNF341Q9BYN7 854 aa19.08■□□□□ 0.64
HDAC6-214ENST00000465269 CRISPLD2Q9H0B8 497 aa19.08■□□□□ 0.64
HDAC6-214ENST00000465269 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
HDAC6-214ENST00000465269 TDHQ8IZJ6 230 aa19.07■□□□□ 0.64
HDAC6-214ENST00000465269 FAM161BQ96MY7 647 aa19.07■□□□□ 0.64
HDAC6-214ENST00000465269 PARK7Q99497 189 aaKnown RBP19.07■□□□□ 0.64
HDAC6-214ENST00000465269 PUS3Q9BZE2 481 aaKnown RBP19.07■□□□□ 0.64
HDAC6-214ENST00000465269 DOCK3Q8IZD9 2030 aa19.07■□□□□ 0.64
HDAC6-214ENST00000465269 RALBP1Q15311 655 aa19.06■□□□□ 0.64
HDAC6-214ENST00000465269 TAF7LQ5H9L4 462 aa19.06■□□□□ 0.64
HDAC6-214ENST00000465269 APOBEC3HQ6NTF7 200 aaKnown RBP19.06■□□□□ 0.64
HDAC6-214ENST00000465269 TEKT1Q969V4 418 aa19.06■□□□□ 0.64
HDAC6-214ENST00000465269 GUCD1Q96NT3 240 aa19.06■□□□□ 0.64
HDAC6-214ENST00000465269 MYH16Q9H6N6 1097 aa19.06■□□□□ 0.64
HDAC6-214ENST00000465269 TNPO2O14787 897 aaKnown RBP19.05■□□□□ 0.64
HDAC6-214ENST00000465269 TCP10Q12799 353 aa19.05■□□□□ 0.64
HDAC6-214ENST00000465269 DCAF15Q66K64 600 aa19.05■□□□□ 0.64
HDAC6-214ENST00000465269 FAM83AQ86UY5 434 aa19.05■□□□□ 0.64
HDAC6-214ENST00000465269 DNAAF4Q8WXU2 420 aa19.05■□□□□ 0.64
HDAC6-214ENST00000465269 UBE2OQ9C0C9 1292 aaKnown RBP19.05■□□□□ 0.64
HDAC6-214ENST00000465269 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.05■□□□□ 0.64
HDAC6-214ENST00000465269 TMOD2Q9NZR1 351 aa19.05■□□□□ 0.64
HDAC6-214ENST00000465269 MUC3AQ02505 3323 aa19.05■□□□□ 0.64
HDAC6-214ENST00000465269 CDH23Q9H251 3354 aa19.04■□□□□ 0.64
HDAC6-214ENST00000465269 FLIIQ13045 1269 aa19.04■□□□□ 0.64
HDAC6-214ENST00000465269 TRIM32Q13049 653 aa19.04■□□□□ 0.64
HDAC6-214ENST00000465269 FKBP5Q13451 457 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-214ENST00000465269 LINS1Q8NG48 757 aa19.04■□□□□ 0.64
HDAC6-214ENST00000465269 ZDHHC15Q96MV8 337 aa19.03■□□□□ 0.64
HDAC6-214ENST00000465269 ZNF112Q9UJU3 913 aa19.03■□□□□ 0.64
HDAC6-214ENST00000465269 RPTORQ8N122 1335 aa19.02■□□□□ 0.64
HDAC6-214ENST00000465269 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.64
HDAC6-214ENST00000465269 F6X3S4 739 aa19.02■□□□□ 0.64
HDAC6-214ENST00000465269 SLURP2P0DP57 97 aa19.02■□□□□ 0.64
HDAC6-214ENST00000465269 UBE4AQ14139 1066 aa19.02■□□□□ 0.64
HDAC6-214ENST00000465269 CCDC57Q2TAC2 916 aa19.02■□□□□ 0.64
HDAC6-214ENST00000465269 GADL1Q6ZQY3 521 aa19.02■□□□□ 0.64
HDAC6-214ENST00000465269 PXYLP1Q8TE99 480 aa19.02■□□□□ 0.64
HDAC6-214ENST00000465269 DDX60LQ5H9U9 1706 aaKnown RBP19.01■□□□□ 0.63
HDAC6-214ENST00000465269 HDLBPQ00341 1268 aaKnown RBP19.01■□□□□ 0.63
HDAC6-214ENST00000465269 NFIAQ12857 509 aa19.01■□□□□ 0.63
HDAC6-214ENST00000465269 IRF5Q13568 498 aa19.01■□□□□ 0.63
HDAC6-214ENST00000465269 HOOK2Q96ED9 719 aa19.01■□□□□ 0.63
HDAC6-214ENST00000465269 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-214ENST00000465269 AK9Q5TCS8 1911 aa19■□□□□ 0.63
HDAC6-214ENST00000465269 FRAT2O75474 233 aaPredicted RBP19■□□□□ 0.63
HDAC6-214ENST00000465269 CALD1Q05682 793 aaKnown RBP19■□□□□ 0.63
HDAC6-214ENST00000465269 TWISTNBQ3B726 338 aaPredicted RBP19■□□□□ 0.63
HDAC6-214ENST00000465269 FKBP1CQ5VVH2 108 aa19■□□□□ 0.63
HDAC6-214ENST00000465269 FBXO33Q7Z6M2 555 aa19■□□□□ 0.63
HDAC6-214ENST00000465269 VPS37DQ86XT2 251 aa19■□□□□ 0.63
HDAC6-214ENST00000465269 ZFPM1Q8IX07 1006 aa19■□□□□ 0.63
HDAC6-214ENST00000465269 RPAP1Q9BWH6 1393 aaPredicted RBP19■□□□□ 0.63
HDAC6-214ENST00000465269 MDM2Q00987 491 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-214ENST00000465269 CCDC84Q86UT8 332 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-214ENST00000465269 ANKRD13CQ8N6S4 541 aa18.99■□□□□ 0.63
HDAC6-214ENST00000465269 NBPF3Q9H094 633 aa18.99■□□□□ 0.63
HDAC6-214ENST00000465269 PRDM6Q9NQX0 595 aa18.99■□□□□ 0.63
HDAC6-214ENST00000465269 ZHX2Q9Y6X8 837 aa18.99■□□□□ 0.63
HDAC6-214ENST00000465269 CXCL11O14625 94 aa18.98■□□□□ 0.63
HDAC6-214ENST00000465269 NOL9Q5SY16 702 aaKnown RBP18.98■□□□□ 0.63
HDAC6-214ENST00000465269 FAM151AQ8WW52 585 aa18.98■□□□□ 0.63
HDAC6-214ENST00000465269 CHMP4AQ9BY43 222 aa18.98■□□□□ 0.63
HDAC6-214ENST00000465269 C11orf49Q9H6J7 331 aa18.98■□□□□ 0.63
HDAC6-214ENST00000465269 PFASO15067 1338 aa18.98■□□□□ 0.63
HDAC6-214ENST00000465269 A0A0G2JLL6 359 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-214ENST00000465269 PRRT2Q7Z6L0 340 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-214ENST00000465269 SMCR8Q8TEV9 937 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-214ENST00000465269 RAPGEFL1Q9UHV5 662 aa18.97■□□□□ 0.63
HDAC6-214ENST00000465269 POTEB2H3BUK9 544 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms