RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 FLCNQ8NFG4 579 aa7.58□□□□□ -1.2
VPS8-217ENST00000465213 DDX54Q8TDD1 881 aaKnown RBP7.58□□□□□ -1.2
VPS8-217ENST00000465213 BRPF3Q9ULD4 1205 aa7.58□□□□□ -1.2
VPS8-217ENST00000465213 SOWAHDA6NJG2 315 aa7.57□□□□□ -1.2
VPS8-217ENST00000465213 JAG1P78504 1218 aa7.57□□□□□ -1.2
VPS8-217ENST00000465213 AKAP4Q5JQC9 854 aa7.57□□□□□ -1.2
VPS8-217ENST00000465213 CORO1BQ9BR76 489 aa7.57□□□□□ -1.2
VPS8-217ENST00000465213 TRAIPQ9BWF2 469 aa7.57□□□□□ -1.2
VPS8-217ENST00000465213 ZNF576Q9H609 170 aa7.57□□□□□ -1.2
VPS8-217ENST00000465213 ECEL1O95672 775 aa7.56□□□□□ -1.2
VPS8-217ENST00000465213 PTPN12Q05209 780 aaKnown RBP7.56□□□□□ -1.2
VPS8-217ENST00000465213 OGFOD3Q6PK18 319 aa7.56□□□□□ -1.2
VPS8-217ENST00000465213 WFDC3Q8IUB2 231 aa7.56□□□□□ -1.2
VPS8-217ENST00000465213 RAD18Q9NS91 495 aa7.56□□□□□ -1.2
VPS8-217ENST00000465213 AP4E1Q9UPM8 1137 aa7.56□□□□□ -1.2
VPS8-217ENST00000465213 AOC2O75106 756 aa7.55□□□□□ -1.2
VPS8-217ENST00000465213 NEFLP07196 543 aa7.55□□□□□ -1.2
VPS8-217ENST00000465213 ASPAP45381 313 aa7.55□□□□□ -1.2
VPS8-217ENST00000465213 STK11IPQ8N1F8 1099 aa7.55□□□□□ -1.2
VPS8-217ENST00000465213 BCL7CQ8WUZ0 217 aaPredicted RBP7.55□□□□□ -1.2
VPS8-217ENST00000465213 WDR18Q9BV38 432 aa7.55□□□□□ -1.2
VPS8-217ENST00000465213 LRRC4CQ9HCJ2 640 aa7.55□□□□□ -1.2
VPS8-217ENST00000465213 DYNC1LI2O43237 492 aaPredicted RBP7.54□□□□□ -1.2
VPS8-217ENST00000465213 NDUFB5O43674 189 aa7.54□□□□□ -1.2
VPS8-217ENST00000465213 PAPLNO95428 1278 aa7.54□□□□□ -1.2
VPS8-217ENST00000465213 C8AP07357 584 aa7.54□□□□□ -1.2
VPS8-217ENST00000465213 AP3B2Q13367 1082 aa7.54□□□□□ -1.2
VPS8-217ENST00000465213 USPL1Q5W0Q7 1092 aa7.54□□□□□ -1.2
VPS8-217ENST00000465213 SLC5A6Q9Y289 635 aa7.54□□□□□ -1.2
VPS8-217ENST00000465213 IGHA2P01877 340 aa7.53□□□□□ -1.2
VPS8-217ENST00000465213 KCNA1Q09470 495 aa7.53□□□□□ -1.2
VPS8-217ENST00000465213 MISP3Q96FF7 219 aa7.53□□□□□ -1.2
VPS8-217ENST00000465213 CITED4Q96RK1 184 aa7.53□□□□□ -1.2
VPS8-217ENST00000465213 FAM129BQ96TA1 746 aa7.53□□□□□ -1.2
VPS8-217ENST00000465213 KRTAP4-7Q9BYR0 210 aa7.53□□□□□ -1.2
VPS8-217ENST00000465213 CYP27C1Q4G0S4 372 aa7.52□□□□□ -1.21
VPS8-217ENST00000465213 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
VPS8-217ENST00000465213 PRPF40BQ6NWY9 871 aaKnown RBP7.52□□□□□ -1.21
VPS8-217ENST00000465213 PPP1R9AQ9ULJ8 1098 aa7.52□□□□□ -1.21
VPS8-217ENST00000465213 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.21
VPS8-217ENST00000465213 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.21
VPS8-217ENST00000465213 TMPRSS2O15393 492 aa7.51□□□□□ -1.21
VPS8-217ENST00000465213 RBCK1Q9BYM8 510 aa7.51□□□□□ -1.21
VPS8-217ENST00000465213 EHD4Q9H223 541 aa7.51□□□□□ -1.21
VPS8-217ENST00000465213 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
VPS8-217ENST00000465213 BIN2Q9UBW5 565 aaPredicted RBP7.51□□□□□ -1.21
VPS8-217ENST00000465213 GPR182O15218 404 aa7.5□□□□□ -1.21
VPS8-217ENST00000465213 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
VPS8-217ENST00000465213 PDE3BQ13370 1112 aa7.5□□□□□ -1.21
VPS8-217ENST00000465213 PDE3AQ14432 1141 aa7.5□□□□□ -1.21
VPS8-217ENST00000465213 SPRED2Q7Z698 418 aa7.5□□□□□ -1.21
VPS8-217ENST00000465213 NPHS2Q9NP85 383 aa7.5□□□□□ -1.21
VPS8-217ENST00000465213 CRIM1Q9NZV1 1036 aa7.5□□□□□ -1.21
VPS8-217ENST00000465213 PLCL1Q15111 1095 aa7.49□□□□□ -1.21
VPS8-217ENST00000465213 ZNF792Q3KQV3 632 aa7.49□□□□□ -1.21
VPS8-217ENST00000465213 ZNF574Q6ZN55 896 aaPredicted RBP7.49□□□□□ -1.21
VPS8-217ENST00000465213 BIN1O00499 593 aa7.48□□□□□ -1.21
VPS8-217ENST00000465213 ORC1Q13415 861 aa7.48□□□□□ -1.21
VPS8-217ENST00000465213 TMC1Q8TDI8 760 aa7.48□□□□□ -1.21
VPS8-217ENST00000465213 NIF3L1Q9GZT8 377 aa7.48□□□□□ -1.21
VPS8-217ENST00000465213 DNAJC25Q9H1X3 360 aa7.48□□□□□ -1.21
VPS8-217ENST00000465213 ATXN3LQ9H3M9 355 aa7.48□□□□□ -1.21
VPS8-217ENST00000465213 KRT82Q9NSB4 513 aa7.48□□□□□ -1.21
VPS8-217ENST00000465213 PCDHGC5Q9Y5F6 944 aa7.48□□□□□ -1.21
VPS8-217ENST00000465213 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.48□□□□□ -1.21
VPS8-217ENST00000465213 FUT4P22083 530 aa7.47□□□□□ -1.21
VPS8-217ENST00000465213 KIF4BQ2VIQ3 1234 aa7.47□□□□□ -1.21
VPS8-217ENST00000465213 TMC7Q7Z402 723 aa7.47□□□□□ -1.21
VPS8-217ENST00000465213 ATG4DQ86TL0 474 aaPredicted RBP7.47□□□□□ -1.21
VPS8-217ENST00000465213 NETO1Q8TDF5 533 aa7.47□□□□□ -1.21
VPS8-217ENST00000465213 WDR89Q96FK6 387 aaPredicted RBP7.47□□□□□ -1.21
VPS8-217ENST00000465213 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
VPS8-217ENST00000465213 CCDC86Q9H6F5 360 aaKnown RBP7.47□□□□□ -1.21
VPS8-217ENST00000465213 MKNK2Q9HBH9 465 aa7.47□□□□□ -1.21
VPS8-217ENST00000465213 DCTN4Q9UJW0 460 aa7.47□□□□□ -1.21
VPS8-217ENST00000465213 CARMIL2Q6F5E8 1435 aa7.46□□□□□ -1.21
VPS8-217ENST00000465213 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 SLFN14P0C7P3 912 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 FAM87AP0C7U9 286 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 ID3Q02535 119 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 FAAP100Q0VG06 881 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 CDK5R2Q13319 367 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 PLD6Q8N2A8 252 aaKnown RBP7.46□□□□□ -1.22
VPS8-217ENST00000465213 CCDC74AQ96AQ1 378 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 DMRTB1Q96MA1 342 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 PIDD1Q9HB75 910 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 DISC1Q9NRI5 854 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 VAV3Q9UKW4 847 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 TRAK1Q9UPV9 953 aa7.46□□□□□ -1.22
VPS8-217ENST00000465213 ZNF862O60290 1169 aa7.45□□□□□ -1.22
VPS8-217ENST00000465213 PDIA4P13667 645 aaKnown RBP7.45□□□□□ -1.22
VPS8-217ENST00000465213 LIG1P18858 919 aa7.45□□□□□ -1.22
VPS8-217ENST00000465213 PRKCQQ04759 706 aa7.45□□□□□ -1.22
VPS8-217ENST00000465213 GLIS3Q8NEA6 775 aa7.45□□□□□ -1.22
VPS8-217ENST00000465213 ALKBH8Q96BT7 664 aaKnown RBP7.45□□□□□ -1.22
VPS8-217ENST00000465213 LGR6Q9HBX8 967 aa7.45□□□□□ -1.22
VPS8-217ENST00000465213 EIF1AYO14602 144 aaKnown RBP7.44□□□□□ -1.22
VPS8-217ENST00000465213 GSTP1P09211 210 aaKnown RBP7.44□□□□□ -1.22
VPS8-217ENST00000465213 CD8BP10966 210 aa7.44□□□□□ -1.22
VPS8-217ENST00000465213 HNRNPUQ00839 825 aaKnown RBP eCLIP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms