RNA–Protein interactions for RNA: ENST00000465108.5

UBA3-207, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 804 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-207ENST00000465108 USP40Q9NVE5 1235 aa16.88■□□□□ 0.29
UBA3-207ENST00000465108 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
UBA3-207ENST00000465108 PITPNM2Q9BZ72 1349 aa16.88■□□□□ 0.29
UBA3-207ENST00000465108 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
UBA3-207ENST00000465108 BTDP43251 543 aa16.87■□□□□ 0.29
UBA3-207ENST00000465108 CACNB3P54284 484 aa16.87■□□□□ 0.29
UBA3-207ENST00000465108 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
UBA3-207ENST00000465108 PRAMEF18Q5VWM3 479 aa16.87■□□□□ 0.29
UBA3-207ENST00000465108 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
UBA3-207ENST00000465108 MROH7-TTC4A0A0A0MT08 1334 aa16.87■□□□□ 0.29
UBA3-207ENST00000465108 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
UBA3-207ENST00000465108 ECM29Q5VYK3 1845 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 CELF2O95319 508 aaKnown RBP16.86■□□□□ 0.29
UBA3-207ENST00000465108 HSPA6P17066 643 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 CYP7A1P22680 504 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 APLP1P51693 650 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 MAGEB6Q8N7X4 407 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 ZNF384Q8TF68 577 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 CDCA5Q96FF9 252 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
UBA3-207ENST00000465108 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
UBA3-207ENST00000465108 TNNI2P48788 182 aa16.85■□□□□ 0.29
UBA3-207ENST00000465108 TNFAIP1Q13829 316 aa16.85■□□□□ 0.29
UBA3-207ENST00000465108 CDC42EP5Q6NZY7 148 aa16.85■□□□□ 0.29
UBA3-207ENST00000465108 FAM163AQ96GL9 167 aaPredicted RBP16.85■□□□□ 0.29
UBA3-207ENST00000465108 DEFB129Q9H1M3 183 aa16.85■□□□□ 0.29
UBA3-207ENST00000465108 TMEM88BA6NKF7 163 aa16.84■□□□□ 0.29
UBA3-207ENST00000465108 PDE1AP54750 535 aa16.84■□□□□ 0.29
UBA3-207ENST00000465108 HTRA3P83110 453 aa16.84■□□□□ 0.29
UBA3-207ENST00000465108 RASA3Q14644 834 aa16.84■□□□□ 0.29
UBA3-207ENST00000465108 SLC9C2Q5TAH2 1124 aa16.84■□□□□ 0.29
UBA3-207ENST00000465108 GAKO14976 1311 aa16.84■□□□□ 0.29
UBA3-207ENST00000465108 TRPM7Q96QT4 1865 aa16.84■□□□□ 0.29
UBA3-207ENST00000465108 GPR75-ASB3A0A0A6YYF3 556 aa16.83■□□□□ 0.28
UBA3-207ENST00000465108 BAG3O95817 575 aa16.83■□□□□ 0.28
UBA3-207ENST00000465108 NF2P35240 595 aa16.83■□□□□ 0.28
UBA3-207ENST00000465108 TCP10Q12799 353 aa16.83■□□□□ 0.28
UBA3-207ENST00000465108 TTLL12Q14166 644 aaPredicted RBP16.83■□□□□ 0.28
UBA3-207ENST00000465108 AK9Q5TCS8 1911 aa16.83■□□□□ 0.28
UBA3-207ENST00000465108 PI4K2BQ8TCG2 481 aa16.83■□□□□ 0.28
UBA3-207ENST00000465108 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.83■□□□□ 0.28
UBA3-207ENST00000465108 AATFQ9NY61 560 aaKnown RBP eCLIP16.83■□□□□ 0.28
UBA3-207ENST00000465108 ABT1Q9ULW3 272 aaKnown RBP16.83■□□□□ 0.28
UBA3-207ENST00000465108 SALL3Q9BXA9 1300 aa16.82■□□□□ 0.28
UBA3-207ENST00000465108 PDE6AP16499 860 aa16.82■□□□□ 0.28
UBA3-207ENST00000465108 PICALMQ13492 652 aa16.82■□□□□ 0.28
UBA3-207ENST00000465108 PRKG1Q13976 671 aa16.82■□□□□ 0.28
UBA3-207ENST00000465108 MIGA1Q8NAN2 632 aa16.82■□□□□ 0.28
UBA3-207ENST00000465108 STAP2Q9UGK3 403 aa16.82■□□□□ 0.28
UBA3-207ENST00000465108 ZNF532Q9HCE3 1301 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 IGSF3O75054 1194 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 DYNLL1P63167 89 aaKnown RBP16.81■□□□□ 0.28
UBA3-207ENST00000465108 CST9Q5W186 159 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 ZSCAN25Q6NSZ9 544 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
UBA3-207ENST00000465108 ADGRA1Q86SQ6 560 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 PLEKHM2Q8IWE5 1019 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 TEX11Q8IYF3 940 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 C2orf69Q8N8R5 385 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 SH3RF3Q8TEJ3 882 aaPredicted RBP16.81■□□□□ 0.28
UBA3-207ENST00000465108 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 PPP2R3BQ9Y5P8 575 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 MAST2Q6P0Q8 1798 aa16.81■□□□□ 0.28
UBA3-207ENST00000465108 DOCK2Q92608 1830 aa16.8■□□□□ 0.28
UBA3-207ENST00000465108 NFIAQ12857 509 aa16.8■□□□□ 0.28
UBA3-207ENST00000465108 NBPF12Q5TAG4 269 aaPredicted RBP16.8■□□□□ 0.28
UBA3-207ENST00000465108 ZSCAN29Q8IWY8 852 aaPredicted RBP16.8■□□□□ 0.28
UBA3-207ENST00000465108 KBTBD3Q8NAB2 608 aa16.8■□□□□ 0.28
UBA3-207ENST00000465108 FSD1Q9BTV5 496 aa16.8■□□□□ 0.28
UBA3-207ENST00000465108 GBA2Q9HCG7 927 aaPredicted RBP16.8■□□□□ 0.28
UBA3-207ENST00000465108 CREBZFQ9NS37 354 aa16.8■□□□□ 0.28
UBA3-207ENST00000465108 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.8■□□□□ 0.28
UBA3-207ENST00000465108 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 PLCG2P16885 1265 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 ADD2P35612 726 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 RGS3P49796 1198 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 RHBDL3P58872 404 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 SUPT20HL1Q3ZLR7 823 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 FKBP1CQ5VVH2 108 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 PAXIP1Q6ZW49 1069 aaPredicted RBP16.79■□□□□ 0.28
UBA3-207ENST00000465108 RILPL2Q969X0 211 aa16.79■□□□□ 0.28
UBA3-207ENST00000465108 MAGEB6P1A0A0J9YX57 407 aa16.78■□□□□ 0.28
UBA3-207ENST00000465108 CHGBP05060 677 aa16.78■□□□□ 0.28
UBA3-207ENST00000465108 PDE4AP27815 886 aa16.78■□□□□ 0.28
UBA3-207ENST00000465108 LRRFIP1Q32MZ4 808 aaKnown RBP16.78■□□□□ 0.28
UBA3-207ENST00000465108 FAM83AQ86UY5 434 aa16.78■□□□□ 0.28
UBA3-207ENST00000465108 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
UBA3-207ENST00000465108 FAM198AQ9UFP1 575 aa16.78■□□□□ 0.28
UBA3-207ENST00000465108 MYH7P12883 1935 aa16.78■□□□□ 0.28
UBA3-207ENST00000465108 CNTNAP1P78357 1384 aa16.77■□□□□ 0.28
UBA3-207ENST00000465108 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.28
UBA3-207ENST00000465108 PPP4CP60510 307 aa16.77■□□□□ 0.28
UBA3-207ENST00000465108 TMED8Q6PL24 325 aaPredicted RBP16.77■□□□□ 0.28
UBA3-207ENST00000465108 MOB2Q70IA6 237 aa16.77■□□□□ 0.28
UBA3-207ENST00000465108 MAPKAPK5Q8IW41 473 aa16.77■□□□□ 0.28
UBA3-207ENST00000465108 CDAN1Q8IWY9 1227 aa16.77■□□□□ 0.28
UBA3-207ENST00000465108 ZFPM1Q8IX07 1006 aa16.77■□□□□ 0.28
UBA3-207ENST00000465108 TGFBRAP1Q8WUH2 860 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms