RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 MKRN1Q9UHC7 482 aaKnown RBP7.36□□□□□ -1.23
CMTM1-207ENST00000465057 KNSTRNQ9Y448 316 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 USP3Q9Y6I4 520 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 CACNA1SQ13698 1873 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 MRC1P22897 1456 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 C10orf71Q711Q0 1435 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 ADCY9O60503 1353 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 SBF1O95248 1867 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 CCDC88AQ3V6T2 1871 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
CMTM1-207ENST00000465057 HSP90AB1P08238 724 aaKnown RBP7.35□□□□□ -1.23
CMTM1-207ENST00000465057 MMP10P09238 476 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 IL13P35225 146 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 MTHFSP49914 203 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 CLDN10P78369 228 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 CNGB1Q14028 1251 aaPredicted RBP7.35□□□□□ -1.23
CMTM1-207ENST00000465057 UBAP2LQ14157 1087 aaKnown RBP7.35□□□□□ -1.23
CMTM1-207ENST00000465057 AMOTQ4VCS5 1084 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 C1orf141Q5JVX7 400 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 C1orf216Q8TAB5 229 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 UBE2Q2Q8WVN8 375 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 CALR3Q96L12 384 aaKnown RBP7.35□□□□□ -1.23
CMTM1-207ENST00000465057 KIAA1024Q9UPX6 916 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 RTCBQ9Y3I0 505 aaKnown RBP7.35□□□□□ -1.23
CMTM1-207ENST00000465057 KCPQ6ZWJ8 1503 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 DLEC1Q9Y238 1755 aa7.35□□□□□ -1.23
CMTM1-207ENST00000465057 CNTNAP4Q9C0A0 1308 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 HMOX1P09601 288 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 EPHA4P54764 986 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 EFHC2Q5JST6 749 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 CC2D1BQ5T0F9 858 aaKnown RBP7.34□□□□□ -1.23
CMTM1-207ENST00000465057 TRAPPC3LQ5T215 181 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 CCDC102BQ68D86 513 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 LYPD4Q6UWN0 246 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 LARGE2Q8N3Y3 721 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 SVOPQ8N4V2 548 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 OGFOD1Q8N543 542 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 AIDAQ96BJ3 306 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 DNAAF2Q9NVR5 837 aaKnown RBP7.34□□□□□ -1.23
CMTM1-207ENST00000465057 SCHIP1Q9P0W5 487 aaPredicted RBP7.34□□□□□ -1.23
CMTM1-207ENST00000465057 NRXN2Q9P2S2 1712 aa7.34□□□□□ -1.23
CMTM1-207ENST00000465057 COL3A1P02461 1466 aaPredicted RBP7.34□□□□□ -1.23
CMTM1-207ENST00000465057 SCN7AQ01118 1682 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 PALM3A6NDB9 673 aaPredicted RBP7.33□□□□□ -1.24
CMTM1-207ENST00000465057 RPS6KA4O75676 772 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 ARHGEF15O94989 841 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 GYS1P13807 737 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 MX2P20592 715 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 RFC4P35249 363 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 CRKLP46109 303 aaKnown RBP7.33□□□□□ -1.24
CMTM1-207ENST00000465057 FOXK2Q01167 660 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 TPCN2Q8NHX9 752 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 SRP68Q9UHB9 627 aaKnown RBP7.33□□□□□ -1.24
CMTM1-207ENST00000465057 ADAMTS8Q9UP79 889 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 PHF24Q9UPV7 400 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 MAFBQ9Y5Q3 323 aaPredicted RBP7.33□□□□□ -1.24
CMTM1-207ENST00000465057 NPC1L1Q9UHC9 1359 aa7.33□□□□□ -1.24
CMTM1-207ENST00000465057 ANKRD31Q8N7Z5 1873 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 A0A0G2JLW4 131 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 M0R2N6 131 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 CELA2BP08218 269 aaPredicted RBP7.32□□□□□ -1.24
CMTM1-207ENST00000465057 ATP4AP20648 1035 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 DDX10Q13206 875 aaKnown RBP7.32□□□□□ -1.24
CMTM1-207ENST00000465057 SLC39A6Q13433 755 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 AKAP4Q5JQC9 854 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 TNS4Q8IZW8 715 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 SIX5Q8N196 739 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 PPP1R12CQ9BZL4 782 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 LGR6Q9HBX8 967 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 NDFIP2Q9NV92 336 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 ZDHHC3Q9NYG2 299 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
CMTM1-207ENST00000465057 BCS1LQ9Y276 419 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 DLG5Q8TDM6 1919 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
CMTM1-207ENST00000465057 TIAM2Q8IVF5 1701 aa7.32□□□□□ -1.24
CMTM1-207ENST00000465057 USP42Q9H9J4 1324 aaKnown RBP7.31□□□□□ -1.24
CMTM1-207ENST00000465057 BCORQ6W2J9 1755 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 DKK1O94907 266 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 DPEP1P16444 411 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 TEAD4Q15561 434 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 MTHFSDQ2M296 383 aaKnown RBP7.31□□□□□ -1.24
CMTM1-207ENST00000465057 NLRP8Q86W28 1048 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 DNAJC10Q8IXB1 793 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 NLGN1Q8N2Q7 840 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 SLC52A2Q9HAB3 445 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 CCDC87Q9NVE4 849 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 ATXN7L1Q9ULK2 861 aaPredicted RBP7.31□□□□□ -1.24
CMTM1-207ENST00000465057 PARP3Q9Y6F1 533 aa7.31□□□□□ -1.24
CMTM1-207ENST00000465057 PCNTO95613 3336 aa7.3□□□□□ -1.24
CMTM1-207ENST00000465057 RNMTO43148 476 aaKnown RBP7.3□□□□□ -1.24
CMTM1-207ENST00000465057 BNIP3LO60238 219 aa7.3□□□□□ -1.24
CMTM1-207ENST00000465057 DIAPH1O60610 1272 aaKnown RBP7.3□□□□□ -1.24
CMTM1-207ENST00000465057 NOS2P35228 1153 aa7.3□□□□□ -1.24
CMTM1-207ENST00000465057 MAP2K3P46734 347 aa7.3□□□□□ -1.24
CMTM1-207ENST00000465057 TGFB2P61812 414 aa7.3□□□□□ -1.24
CMTM1-207ENST00000465057 HNRNPUQ00839 825 aaKnown RBP eCLIP7.3□□□□□ -1.24
CMTM1-207ENST00000465057 DDR1Q08345 913 aa7.3□□□□□ -1.24
CMTM1-207ENST00000465057 INTS5Q6P9B9 1019 aaKnown RBP7.3□□□□□ -1.24
CMTM1-207ENST00000465057 FIGNL1Q6PIW4 674 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms