RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 HOOK2Q96ED9 719 aa16.65■□□□□ 0.26
LIMD1-203ENST00000465039 CDCA5Q96FF9 252 aa16.65■□□□□ 0.26
LIMD1-203ENST00000465039 IDI2Q9BXS1 227 aa16.65■□□□□ 0.26
LIMD1-203ENST00000465039 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.65■□□□□ 0.266e-7■■□□□ 12
LIMD1-203ENST00000465039 TDRD3Q9H7E2 651 aaKnown RBP16.65■□□□□ 0.26
LIMD1-203ENST00000465039 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
LIMD1-203ENST00000465039 UNCXA6NJT0 531 aa16.64■□□□□ 0.25
LIMD1-203ENST00000465039 ADM5C9JUS6 153 aa16.64■□□□□ 0.25
LIMD1-203ENST00000465039 BAG3O95817 575 aa16.64■□□□□ 0.25
LIMD1-203ENST00000465039 PPP4CP60510 307 aa16.64■□□□□ 0.25
LIMD1-203ENST00000465039 LRRFIP1Q32MZ4 808 aaKnown RBP16.64■□□□□ 0.25
LIMD1-203ENST00000465039 SUPT20HL1Q3ZLR7 823 aa16.64■□□□□ 0.25
LIMD1-203ENST00000465039 ZSCAN25Q6NSZ9 544 aa16.64■□□□□ 0.25
LIMD1-203ENST00000465039 NOL10Q9BSC4 688 aaKnown RBP16.64■□□□□ 0.25
LIMD1-203ENST00000465039 CLRN2A0PK11 232 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 GOLIM4O00461 696 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 TRAF5O00463 557 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 ENTPD3O75355 529 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 IDH1O75874 414 aaKnown RBP16.63■□□□□ 0.25
LIMD1-203ENST00000465039 CDC42EP5Q6NZY7 148 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 PI4K2BQ8TCG2 481 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
LIMD1-203ENST00000465039 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 VEZTQ9HBM0 779 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
LIMD1-203ENST00000465039 MYH7P12883 1935 aa16.62■□□□□ 0.25
LIMD1-203ENST00000465039 CELF2O95319 508 aaKnown RBP16.62■□□□□ 0.25
LIMD1-203ENST00000465039 BTDP43251 543 aa16.62■□□□□ 0.25
LIMD1-203ENST00000465039 RASA3Q14644 834 aa16.62■□□□□ 0.25
LIMD1-203ENST00000465039 CST9Q5W186 159 aa16.62■□□□□ 0.25
LIMD1-203ENST00000465039 BOLA2Q9H3K6 86 aa16.62■□□□□ 0.25
LIMD1-203ENST00000465039 MYO5AQ9Y4I1 1855 aaKnown RBP16.62■□□□□ 0.25
LIMD1-203ENST00000465039 RASSF10A6NK89 507 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 ZFYP08048 801 aaPredicted RBP16.61■□□□□ 0.25
LIMD1-203ENST00000465039 PDE1AP54750 535 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 RHBDL3P58872 404 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 UBE3CQ15386 1083 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 CENPQQ7L2Z9 268 aaPredicted RBP16.61■□□□□ 0.25
LIMD1-203ENST00000465039 KBTBD3Q8NAB2 608 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 FAM151AQ8WW52 585 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 LNPKQ9C0E8 428 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 ANTXR1Q9H6X2 564 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 USP40Q9NVE5 1235 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 CNTNAP1P78357 1384 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 ATRNL1Q5VV63 1379 aa16.61■□□□□ 0.25
LIMD1-203ENST00000465039 PDE6AP16499 860 aa16.6■□□□□ 0.25
LIMD1-203ENST00000465039 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
LIMD1-203ENST00000465039 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
LIMD1-203ENST00000465039 SAPCD2Q86UD0 394 aa16.6■□□□□ 0.25
LIMD1-203ENST00000465039 C2orf69Q8N8R5 385 aa16.6■□□□□ 0.25
LIMD1-203ENST00000465039 TEPSINQ96N21 525 aa16.6■□□□□ 0.25
LIMD1-203ENST00000465039 GBA2Q9HCG7 927 aaPredicted RBP16.6■□□□□ 0.25
LIMD1-203ENST00000465039 FOCADQ5VW36 1801 aa16.6■□□□□ 0.25
LIMD1-203ENST00000465039 WDHD1O75717 1129 aaPredicted RBP16.59■□□□□ 0.25
LIMD1-203ENST00000465039 CYP7A1P22680 504 aa16.59■□□□□ 0.25
LIMD1-203ENST00000465039 MAGEB6Q8N7X4 407 aa16.59■□□□□ 0.25
LIMD1-203ENST00000465039 OTUD7AQ8TE49 926 aaPredicted RBP16.59■□□□□ 0.25
LIMD1-203ENST00000465039 TAOK2Q9UL54 1235 aa16.59■□□□□ 0.25
LIMD1-203ENST00000465039 SSC5DA1L4H1 1573 aa16.59■□□□□ 0.25
LIMD1-203ENST00000465039 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
LIMD1-203ENST00000465039 TCRBV5S4A2TA0A5A2 114 aa16.58■□□□□ 0.24
LIMD1-203ENST00000465039 PPP1R12BO60237 982 aaPredicted RBP16.58■□□□□ 0.24
LIMD1-203ENST00000465039 ADD2P35612 726 aa16.58■□□□□ 0.24
LIMD1-203ENST00000465039 NDUFB9Q9Y6M9 179 aa16.58■□□□□ 0.24
LIMD1-203ENST00000465039 THSD7BQ9C0I4 1608 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 TCP10L2B9ZVM9 353 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 DCAF15Q66K64 600 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 B4GALNT3Q6L9W6 998 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 ARMC9Q7Z3E5 817 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 ADGRA1Q86SQ6 560 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 FAM198AQ9UFP1 575 aa16.57■□□□□ 0.24
LIMD1-203ENST00000465039 ABT1Q9ULW3 272 aaKnown RBP16.57■□□□□ 0.24
LIMD1-203ENST00000465039 ZNF532Q9HCE3 1301 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 ECE1P42892 770 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 RGS3P49796 1198 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 NFIAQ12857 509 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 TEX11Q8IYF3 940 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 RIOK1Q9BRS2 568 aaKnown RBP16.56■□□□□ 0.24
LIMD1-203ENST00000465039 TMEM39BQ9GZU3 492 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
LIMD1-203ENST00000465039 ZNF408Q9H9D4 720 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 AATFQ9NY61 560 aaKnown RBP eCLIP16.56■□□□□ 0.24
LIMD1-203ENST00000465039 CDK5RAP2Q96SN8 1893 aa16.56■□□□□ 0.24
LIMD1-203ENST00000465039 CACNB3P54284 484 aa16.55■□□□□ 0.24
LIMD1-203ENST00000465039 HUNKP57058 714 aa16.55■□□□□ 0.24
LIMD1-203ENST00000465039 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
LIMD1-203ENST00000465039 TSHZ3Q63HK5 1081 aa16.55■□□□□ 0.24
LIMD1-203ENST00000465039 EDC3Q96F86 508 aaKnown RBP16.55■□□□□ 0.24
LIMD1-203ENST00000465039 MAGEB6P1A0A0J9YX57 407 aa16.54■□□□□ 0.24
LIMD1-203ENST00000465039 IREB2P48200 963 aaKnown RBP16.54■□□□□ 0.24
LIMD1-203ENST00000465039 MAP3K10Q02779 954 aa16.54■□□□□ 0.24
LIMD1-203ENST00000465039 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
LIMD1-203ENST00000465039 LDLRAD1Q5T700 205 aa16.54■□□□□ 0.24
LIMD1-203ENST00000465039 NBPF12Q5TAG4 269 aaPredicted RBP16.54■□□□□ 0.24
LIMD1-203ENST00000465039 DNAJC5GQ8N7S2 189 aa16.54■□□□□ 0.24
LIMD1-203ENST00000465039 SH3RF3Q8TEJ3 882 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms