RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ZNF765Q7L2R6 523 aa8.73□□□□□ -1.01
UBR4-209ENST00000465036 ASIC4Q96FT7 647 aa8.73□□□□□ -1.01
UBR4-209ENST00000465036 WDR18Q9BV38 432 aa8.73□□□□□ -1.01
UBR4-209ENST00000465036 ABCB6Q9NP58 842 aa8.73□□□□□ -1.01
UBR4-209ENST00000465036 PAK6Q9NQU5 681 aaPredicted RBP8.73□□□□□ -1.01
UBR4-209ENST00000465036 ZC3H7BQ9UGR2 993 aaKnown RBP8.73□□□□□ -1.01
UBR4-209ENST00000465036 IGHA2P01877 340 aa8.72□□□□□ -1.01
UBR4-209ENST00000465036 COL19A1Q14993 1142 aa8.72□□□□□ -1.01
UBR4-209ENST00000465036 NPHS2Q9NP85 383 aa8.72□□□□□ -1.01
UBR4-209ENST00000465036 AP4E1Q9UPM8 1137 aa8.72□□□□□ -1.01
UBR4-209ENST00000465036 SERPINB4P48594 390 aa8.71□□□□□ -1.02
UBR4-209ENST00000465036 ORC1Q13415 861 aa8.71□□□□□ -1.02
UBR4-209ENST00000465036 CCDC74AQ96AQ1 378 aa8.71□□□□□ -1.02
UBR4-209ENST00000465036 PPP1R9AQ9ULJ8 1098 aa8.71□□□□□ -1.02
UBR4-209ENST00000465036 TRAK1Q9UPV9 953 aa8.71□□□□□ -1.02
UBR4-209ENST00000465036 TMEM238LA0A1B0GVL6 79 aa8.7□□□□□ -1.02
UBR4-209ENST00000465036 STK11IPQ8N1F8 1099 aa8.7□□□□□ -1.02
UBR4-209ENST00000465036 FLCNQ8NFG4 579 aa8.7□□□□□ -1.02
UBR4-209ENST00000465036 HNRNPUQ00839 825 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBR4-209ENST00000465036 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
UBR4-209ENST00000465036 CYP27C1Q4G0S4 372 aa8.69□□□□□ -1.02
UBR4-209ENST00000465036 TXNDC2Q86VQ3 553 aa8.69□□□□□ -1.02
UBR4-209ENST00000465036 ALKBH8Q96BT7 664 aaKnown RBP8.69□□□□□ -1.02
UBR4-209ENST00000465036 MISP3Q96FF7 219 aa8.69□□□□□ -1.02
UBR4-209ENST00000465036 KRT82Q9NSB4 513 aa8.69□□□□□ -1.02
UBR4-209ENST00000465036 CRIM1Q9NZV1 1036 aa8.69□□□□□ -1.02
UBR4-209ENST00000465036 EIF1AYO14602 144 aaKnown RBP8.68□□□□□ -1.02
UBR4-209ENST00000465036 TMPRSS2O15393 492 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 DYNC1LI2O43237 492 aaPredicted RBP8.68□□□□□ -1.02
UBR4-209ENST00000465036 SLFN14P0C7P3 912 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 POU5F2Q8N7G0 328 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 GLIS3Q8NEA6 775 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 DMRTB1Q96MA1 342 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 LRRC4CQ9HCJ2 640 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 SLC5A6Q9Y289 635 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 DAGLAQ9Y4D2 1042 aa8.68□□□□□ -1.02
UBR4-209ENST00000465036 BCL7CQ8WUZ0 217 aaPredicted RBP8.67□□□□□ -1.02
UBR4-209ENST00000465036 GPR182O15218 404 aa8.66□□□□□ -1.02
UBR4-209ENST00000465036 FAAP100Q0VG06 881 aa8.66□□□□□ -1.02
UBR4-209ENST00000465036 FZD5Q13467 585 aa8.66□□□□□ -1.02
UBR4-209ENST00000465036 KIF4BQ2VIQ3 1234 aa8.66□□□□□ -1.02
UBR4-209ENST00000465036 RBCK1Q9BYM8 510 aa8.66□□□□□ -1.02
UBR4-209ENST00000465036 CCDC86Q9H6F5 360 aaKnown RBP8.66□□□□□ -1.02
UBR4-209ENST00000465036 PCDHGC5Q9Y5F6 944 aa8.66□□□□□ -1.02
UBR4-209ENST00000465036 ARID1BQ8NFD5 2236 aaPredicted RBP8.66□□□□□ -1.02
UBR4-209ENST00000465036 GADD45BO75293 160 aaPredicted RBP8.65□□□□□ -1.02
UBR4-209ENST00000465036 ID3Q02535 119 aa8.65□□□□□ -1.02
UBR4-209ENST00000465036 GRM2Q14416 872 aa8.65□□□□□ -1.02
UBR4-209ENST00000465036 OGFOD2Q6N063 350 aa8.65□□□□□ -1.02
UBR4-209ENST00000465036 WFDC3Q8IUB2 231 aa8.65□□□□□ -1.02
UBR4-209ENST00000465036 FANCD2OSQ96PS1 177 aa8.65□□□□□ -1.02
UBR4-209ENST00000465036 CSRNP1Q96S65 589 aa8.65□□□□□ -1.02
UBR4-209ENST00000465036 NIF3L1Q9GZT8 377 aa8.65□□□□□ -1.02
UBR4-209ENST00000465036 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
UBR4-209ENST00000465036 XRCC5P13010 732 aaKnown RBP8.64□□□□□ -1.03
UBR4-209ENST00000465036 ZNF862O60290 1169 aa8.63□□□□□ -1.03
UBR4-209ENST00000465036 GSTP1P09211 210 aaKnown RBP8.63□□□□□ -1.03
UBR4-209ENST00000465036 LIG1P18858 919 aa8.63□□□□□ -1.03
UBR4-209ENST00000465036 PDE4CQ08493 712 aa8.63□□□□□ -1.03
UBR4-209ENST00000465036 WDR89Q96FK6 387 aaPredicted RBP8.63□□□□□ -1.03
UBR4-209ENST00000465036 PIDD1Q9HB75 910 aa8.63□□□□□ -1.03
UBR4-209ENST00000465036 DISC1Q9NRI5 854 aa8.63□□□□□ -1.03
UBR4-209ENST00000465036 PPP4R2Q9NY27 417 aa8.63□□□□□ -1.03
UBR4-209ENST00000465036 PPP2R3AQ06190 1150 aa8.62□□□□□ -1.03
UBR4-209ENST00000465036 PDZD3Q86UT5 571 aa8.62□□□□□ -1.03
UBR4-209ENST00000465036 SMYD4Q8IYR2 804 aaPredicted RBP8.62□□□□□ -1.03
UBR4-209ENST00000465036 NETO1Q8TDF5 533 aa8.62□□□□□ -1.03
UBR4-209ENST00000465036 TMEM39AQ9NV64 488 aa8.62□□□□□ -1.03
UBR4-209ENST00000465036 BIN1O00499 593 aa8.61□□□□□ -1.03
UBR4-209ENST00000465036 SPRED2Q7Z698 418 aa8.61□□□□□ -1.03
UBR4-209ENST00000465036 VAV3Q9UKW4 847 aa8.61□□□□□ -1.03
UBR4-209ENST00000465036 PAPLNO95428 1278 aa8.6□□□□□ -1.03
UBR4-209ENST00000465036 FAM87AP0C7U9 286 aa8.6□□□□□ -1.03
UBR4-209ENST00000465036 DTHD1Q6ZMT9 781 aa8.6□□□□□ -1.03
UBR4-209ENST00000465036 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
UBR4-209ENST00000465036 TMC1Q8TDI8 760 aa8.6□□□□□ -1.03
UBR4-209ENST00000465036 EPS8L3Q8TE67 593 aaKnown RBP8.6□□□□□ -1.03
UBR4-209ENST00000465036 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
UBR4-209ENST00000465036 FUT4P22083 530 aa8.59□□□□□ -1.03
UBR4-209ENST00000465036 PRKCQQ04759 706 aa8.59□□□□□ -1.03
UBR4-209ENST00000465036 CDK5R2Q13319 367 aa8.59□□□□□ -1.03
UBR4-209ENST00000465036 PLCL1Q15111 1095 aa8.59□□□□□ -1.03
UBR4-209ENST00000465036 ZNF792Q3KQV3 632 aa8.59□□□□□ -1.03
UBR4-209ENST00000465036 LGR6Q9HBX8 967 aa8.59□□□□□ -1.03
UBR4-209ENST00000465036 C8AP07357 584 aa8.58□□□□□ -1.04
UBR4-209ENST00000465036 ZNF157P51786 506 aaPredicted RBP8.58□□□□□ -1.04
UBR4-209ENST00000465036 ZNF574Q6ZN55 896 aaPredicted RBP8.58□□□□□ -1.04
UBR4-209ENST00000465036 ATG4DQ86TL0 474 aaPredicted RBP8.58□□□□□ -1.04
UBR4-209ENST00000465036 NLRP2Q9NX02 1062 aa8.58□□□□□ -1.04
UBR4-209ENST00000465036 FCGRTP55899 365 aa8.57□□□□□ -1.04
UBR4-209ENST00000465036 JAG1P78504 1218 aa8.57□□□□□ -1.04
UBR4-209ENST00000465036 TTLL4Q14679 1199 aa8.57□□□□□ -1.04
UBR4-209ENST00000465036 IFI16Q16666 785 aaKnown RBP8.57□□□□□ -1.04
UBR4-209ENST00000465036 ZC3H12AQ5D1E8 599 aaKnown RBP8.57□□□□□ -1.04
UBR4-209ENST00000465036 PLD6Q8N2A8 252 aaKnown RBP8.57□□□□□ -1.04
UBR4-209ENST00000465036 DUSP23Q9BVJ7 150 aa8.57□□□□□ -1.04
UBR4-209ENST00000465036 ZC3H12CQ9C0D7 883 aaKnown RBP8.57□□□□□ -1.04
UBR4-209ENST00000465036 CACNA2D2Q9NY47 1150 aa8.57□□□□□ -1.04
UBR4-209ENST00000465036 ARNTP27540 789 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms