RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 HIF3AQ9Y2N7 669 aa10.14□□□□□ -0.79
PTCD3-205ENST00000464541 SART1O43290 800 aaKnown RBP10.13□□□□□ -0.79
PTCD3-205ENST00000464541 TRIM37O94972 964 aa10.13□□□□□ -0.79
PTCD3-205ENST00000464541 KIF4BQ2VIQ3 1234 aa10.13□□□□□ -0.79
PTCD3-205ENST00000464541 TTBK2Q6IQ55 1244 aa10.13□□□□□ -0.79
PTCD3-205ENST00000464541 LLGL2Q6P1M3 1020 aa10.13□□□□□ -0.79
PTCD3-205ENST00000464541 UBL7Q96S82 380 aaPredicted RBP10.13□□□□□ -0.79
PTCD3-205ENST00000464541 CBX8Q9HC52 389 aa10.13□□□□□ -0.79
PTCD3-205ENST00000464541 TPSG1Q9NRR2 321 aa10.13□□□□□ -0.79
PTCD3-205ENST00000464541 AOC2O75106 756 aa10.12□□□□□ -0.79
PTCD3-205ENST00000464541 SLFN14P0C7P3 912 aa10.12□□□□□ -0.79
PTCD3-205ENST00000464541 SOX4Q06945 474 aaPredicted RBP10.12□□□□□ -0.79
PTCD3-205ENST00000464541 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.12□□□□□ -0.79
PTCD3-205ENST00000464541 C12orf50Q8NA57 414 aaPredicted RBP10.12□□□□□ -0.79
PTCD3-205ENST00000464541 KCNB2Q92953 911 aa10.12□□□□□ -0.79
PTCD3-205ENST00000464541 WDR18Q9BV38 432 aa10.12□□□□□ -0.79
PTCD3-205ENST00000464541 H2AFB1P0C5Y9 115 aa10.11□□□□□ -0.79
PTCD3-205ENST00000464541 H2AFB2P0C5Z0 115 aa10.11□□□□□ -0.79
PTCD3-205ENST00000464541 ADH5P11766 374 aa10.11□□□□□ -0.79
PTCD3-205ENST00000464541 LIG3P49916 1009 aa10.11□□□□□ -0.79
PTCD3-205ENST00000464541 PWP1Q13610 501 aa10.11□□□□□ -0.79
PTCD3-205ENST00000464541 TP53INP1Q96A56 240 aa10.11□□□□□ -0.79
PTCD3-205ENST00000464541 ZNF862O60290 1169 aa10.1□□□□□ -0.79
PTCD3-205ENST00000464541 PREPP48147 710 aa10.1□□□□□ -0.79
PTCD3-205ENST00000464541 MAP1SQ66K74 1059 aaPredicted RBP10.1□□□□□ -0.79
PTCD3-205ENST00000464541 AGMOQ6ZNB7 445 aa10.1□□□□□ -0.79
PTCD3-205ENST00000464541 MRRFQ96E11 262 aaKnown RBP10.1□□□□□ -0.79
PTCD3-205ENST00000464541 MYRFLQ96LU7 910 aa10.1□□□□□ -0.79
PTCD3-205ENST00000464541 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
PTCD3-205ENST00000464541 DHX15O43143 795 aaKnown RBP10.09□□□□□ -0.79
PTCD3-205ENST00000464541 GAS2O43903 313 aaKnown RBP10.09□□□□□ -0.79
PTCD3-205ENST00000464541 LMNB1P20700 586 aa10.09□□□□□ -0.79
PTCD3-205ENST00000464541 UTP4Q969X6 686 aaKnown RBP10.09□□□□□ -0.79
PTCD3-205ENST00000464541 ZC3H12CQ9C0D7 883 aaKnown RBP10.09□□□□□ -0.79
PTCD3-205ENST00000464541 METTL5Q9NRN9 209 aaKnown RBP10.09□□□□□ -0.79
PTCD3-205ENST00000464541 LIG1P18858 919 aa10.08□□□□□ -0.8
PTCD3-205ENST00000464541 DOC2BQ14184 412 aa10.08□□□□□ -0.8
PTCD3-205ENST00000464541 AKAP4Q5JQC9 854 aa10.08□□□□□ -0.8
PTCD3-205ENST00000464541 LDLRAD1Q5T700 205 aa10.08□□□□□ -0.8
PTCD3-205ENST00000464541 TMEM87AQ8NBN3 555 aa10.08□□□□□ -0.8
PTCD3-205ENST00000464541 C2CD4AQ8NCU7 369 aaPredicted RBP10.08□□□□□ -0.8
PTCD3-205ENST00000464541 GRIN3AQ8TCU5 1115 aa10.08□□□□□ -0.8
PTCD3-205ENST00000464541 GPBAR1Q8TDU6 330 aa10.08□□□□□ -0.8
PTCD3-205ENST00000464541 BACH2Q9BYV9 841 aa10.08□□□□□ -0.8
PTCD3-205ENST00000464541 GSX1Q9H4S2 264 aaPredicted RBP10.08□□□□□ -0.8
PTCD3-205ENST00000464541 ID3Q02535 119 aa10.07□□□□□ -0.8
PTCD3-205ENST00000464541 RASIP1Q5U651 963 aa10.07□□□□□ -0.8
PTCD3-205ENST00000464541 DIEXFQ68CQ4 756 aaKnown RBP10.07□□□□□ -0.8
PTCD3-205ENST00000464541 ARMC10Q8N2F6 343 aa10.07□□□□□ -0.8
PTCD3-205ENST00000464541 ACSBG1Q96GR2 724 aa10.07□□□□□ -0.8
PTCD3-205ENST00000464541 YIPF2Q9BWQ6 316 aa10.07□□□□□ -0.8
PTCD3-205ENST00000464541 PCDHGC5Q9Y5F6 944 aa10.07□□□□□ -0.8
PTCD3-205ENST00000464541 RECKO95980 971 aa10.06□□□□□ -0.8
PTCD3-205ENST00000464541 NKAPLQ5M9Q1 402 aa10.06□□□□□ -0.8
PTCD3-205ENST00000464541 HS2ST1Q7LGA3 356 aa10.06□□□□□ -0.8
PTCD3-205ENST00000464541 ERMP1Q7Z2K6 904 aa10.06□□□□□ -0.8
PTCD3-205ENST00000464541 RELL1Q8IUW5 271 aa10.06□□□□□ -0.8
PTCD3-205ENST00000464541 FAM20CQ8IXL6 584 aa10.06□□□□□ -0.8
PTCD3-205ENST00000464541 WDR89Q96FK6 387 aaPredicted RBP10.06□□□□□ -0.8
PTCD3-205ENST00000464541 ATXN3LQ9H3M9 355 aa10.06□□□□□ -0.8
PTCD3-205ENST00000464541 CRIM1Q9NZV1 1036 aa10.06□□□□□ -0.8
PTCD3-205ENST00000464541 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.05□□□□□ -0.8
PTCD3-205ENST00000464541 UNCXA6NJT0 531 aa10.05□□□□□ -0.8
PTCD3-205ENST00000464541 TMPRSS2O15393 492 aa10.05□□□□□ -0.8
PTCD3-205ENST00000464541 DRD2P14416 443 aa10.05□□□□□ -0.8
PTCD3-205ENST00000464541 MAP3K11Q16584 847 aa10.05□□□□□ -0.8
PTCD3-205ENST00000464541 RSPO4Q2I0M5 234 aaPredicted RBP10.05□□□□□ -0.8
PTCD3-205ENST00000464541 TSNAXIP1Q2TAA8 658 aa10.05□□□□□ -0.8
PTCD3-205ENST00000464541 ZC3H12AQ5D1E8 599 aaKnown RBP10.05□□□□□ -0.8
PTCD3-205ENST00000464541 PRR23CQ6ZRP0 262 aa10.05□□□□□ -0.8
PTCD3-205ENST00000464541 CCDC84Q86UT8 332 aaPredicted RBP10.05□□□□□ -0.8
PTCD3-205ENST00000464541 PHC3Q8NDX5 983 aa10.05□□□□□ -0.8
PTCD3-205ENST00000464541 KIAA1522Q9P206 1035 aaPredicted RBP10.05□□□□□ -0.8
PTCD3-205ENST00000464541 AP4E1Q9UPM8 1137 aa10.05□□□□□ -0.8
PTCD3-205ENST00000464541 SCAMP3O14828 347 aaKnown RBP10.04□□□□□ -0.8
PTCD3-205ENST00000464541 BMP3P12645 472 aa10.04□□□□□ -0.8
PTCD3-205ENST00000464541 ERVK-24P63145 666 aa10.04□□□□□ -0.8
PTCD3-205ENST00000464541 GAL3ST3Q96A11 431 aa10.04□□□□□ -0.8
PTCD3-205ENST00000464541 TMEM74Q96NL1 305 aa10.04□□□□□ -0.8
PTCD3-205ENST00000464541 MIR1-1HGQ9H1L0 117 aa10.04□□□□□ -0.8
PTCD3-205ENST00000464541 PPP1R9AQ9ULJ8 1098 aa10.04□□□□□ -0.8
PTCD3-205ENST00000464541 RAXQ9Y2V3 346 aa10.04□□□□□ -0.8
PTCD3-205ENST00000464541 ACTL7BQ9Y614 415 aa10.04□□□□□ -0.8
PTCD3-205ENST00000464541 ZNF76P36508 570 aa10.03□□□□□ -0.8
PTCD3-205ENST00000464541 USP11P51784 963 aa10.03□□□□□ -0.8
PTCD3-205ENST00000464541 DYMQ7RTS9 669 aa10.03□□□□□ -0.8
PTCD3-205ENST00000464541 SLC51AQ86UW1 340 aa10.03□□□□□ -0.8
PTCD3-205ENST00000464541 CLEC10AQ8IUN9 316 aa10.03□□□□□ -0.8
PTCD3-205ENST00000464541 TRIM42Q8IWZ5 723 aa10.03□□□□□ -0.8
PTCD3-205ENST00000464541 TFE3P19532 575 aaPredicted RBP10.02□□□□□ -0.81
PTCD3-205ENST00000464541 LMNB2Q03252 620 aa10.02□□□□□ -0.81
PTCD3-205ENST00000464541 EZH1Q92800 747 aaPredicted RBP10.02□□□□□ -0.81
PTCD3-205ENST00000464541 RHOVQ96L33 236 aa10.02□□□□□ -0.81
PTCD3-205ENST00000464541 GGT7Q9UJ14 662 aa10.02□□□□□ -0.81
PTCD3-205ENST00000464541 PCDHA4Q9UN74 947 aa10.02□□□□□ -0.81
PTCD3-205ENST00000464541 DYRK3O43781 588 aa10.01□□□□□ -0.81
PTCD3-205ENST00000464541 MAP4P27816 1152 aaKnown RBP10.01□□□□□ -0.81
PTCD3-205ENST00000464541 GBP2P32456 591 aaPredicted RBP10.01□□□□□ -0.81
PTCD3-205ENST00000464541 ASPAP45381 313 aa10.01□□□□□ -0.81
PTCD3-205ENST00000464541 FANCCQ00597 558 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms