RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 NRSN2Q9GZP1 204 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 KRT82Q9NSB4 513 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 NOP53Q9NZM5 478 aaKnown RBP5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 A0A0A0MRY4 1105 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 BPNT1O95861 308 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 HOXB4P17483 251 aaPredicted RBP5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 GARTP22102 1010 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 MAOBP27338 520 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 DNAJA1P31689 397 aaKnown RBP5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 ARID5AQ03989 594 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 SEPT6Q14141 434 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 RASIP1Q5U651 963 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 FAM196AQ6ZSG2 479 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 ILDR2Q71H61 639 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 ALYREFQ86V81 257 aaKnown RBP5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 FMR1NBQ8N0W7 255 aaPredicted RBP5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 GALNT11Q8NCW6 608 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 GRIN3AQ8TCU5 1115 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 GATAD2BQ8WXI9 593 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 TRIM11Q96F44 468 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 DRC1Q96MC2 740 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 TANGO6Q9C0B7 1094 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 ZC3H12CQ9C0D7 883 aaKnown RBP5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 PCDHB5Q9Y5E4 795 aa5.78□□□□□ -1.48
HMGXB4-205ENST00000464480 GREM1O60565 184 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 DEAF1O75398 565 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 F13A1P00488 732 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 SNRPNP63162 240 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 APOBRQ0VD83 1088 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 MPP2Q14168 576 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 CWF19L2Q2TBE0 894 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 FOXD4L6Q3SYB3 417 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 FOXD4L3Q6VB84 417 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 BNC2Q6ZN30 1099 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 FBXO11Q86XK2 927 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 JARID2Q92833 1246 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 GAL3ST3Q96A11 431 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 EAF1Q96JC9 268 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 GMLQ99445 158 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 PLVAPQ9BX97 442 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 UBP1Q9NZI7 540 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 ROBO2Q9HCK4 1378 aa5.77□□□□□ -1.49
HMGXB4-205ENST00000464480 LOC100289279A0A1B0GTE1 492 aa5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 TRIM28Q13263 835 aaKnown RBP5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 COL9A2Q14055 689 aaPredicted RBP5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 DUOXA2Q1HG44 320 aa5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 PRRT3Q5FWE3 981 aa5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 LINC00114Q6XXX2 140 aa5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 GPBAR1Q8TDU6 330 aa5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 NKD1Q969G9 470 aa5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 LRRC3Q9BY71 257 aa5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 PRKAG2Q9UGJ0 569 aa5.76□□□□□ -1.49
HMGXB4-205ENST00000464480 TM4SF5O14894 197 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 DDX3YO15523 660 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 ADAM11O75078 769 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 ECEL1O95672 775 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 ATF4P18848 351 aaPredicted RBP5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 ATP2B1P20020 1258 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 RPL6Q02878 288 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 REC114Q7Z4M0 266 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 UBXN4Q92575 508 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 SEC16BQ96JE7 1060 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.75□□□□□ -1.499e-7■□□□□ 10.7
HMGXB4-205ENST00000464480 CCDC86Q9H6F5 360 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 CACNA2D2Q9NY47 1150 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 PPP1R1BQ9UD71 204 aaPredicted RBP5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 PCDHA4Q9UN74 947 aa5.75□□□□□ -1.49
HMGXB4-205ENST00000464480 CNTNAP5Q8WYK1 1306 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 FAM221AA4D161 298 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 DLL1O00548 723 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 TLR3O15455 904 aaKnown RBP5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 IGSF3O75054 1194 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 CILPO75339 1184 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 IGHA1P01876 353 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 CTSBP07858 339 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 ELNP15502 786 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 CRKP46108 304 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 NASPP49321 788 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 KIF4BQ2VIQ3 1234 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 SEZ6Q53EL9 994 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 MPRIPQ6WCQ1 1025 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 ACAD11Q709F0 780 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 SLITRK4Q8IW52 837 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 ELMO3Q96BJ8 720 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 ARMC5Q96C12 935 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 RUSC1Q9BVN2 902 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 MRPL18Q9H0U6 180 aaKnown RBP5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 GINM1Q9NU53 330 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 KCNK4Q9NYG8 393 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 STRIP2Q9ULQ0 834 aa5.74□□□□□ -1.49
HMGXB4-205ENST00000464480 ZNF862O60290 1169 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 SSBP05455 408 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 FGRP09769 529 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 SLFN14P0C7P3 912 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 LIG1P18858 919 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 SOX9P48436 509 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 WIPI1Q5MNZ9 446 aaPredicted RBP5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 EXOSC6Q5RKV6 272 aaKnown RBP5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 IGF2-ASQ6U949 168 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 FBXO27Q8NI29 283 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms