RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CRY2Q49AN0 593 aa25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 HS1BP3Q53T59 392 aa25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 NAA16Q6N069 864 aaPredicted RBP25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 FERMT3Q86UX7 667 aa25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 ANGEL1Q9UNK9 670 aaKnown RBP25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 NEDD4P46934 1319 aa25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 B4E1Z4 1266 aa25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 AKNAD1Q5T1N1 836 aa25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 TMED8Q6PL24 325 aaPredicted RBP25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 KRT23Q9C075 422 aa25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 XDHP47989 1333 aa25.5■■□□□ 1.67
PDLIM2-216ENST00000464275 SH2B2O14492 632 aaPredicted RBP25.5■■□□□ 1.67
PDLIM2-216ENST00000464275 CTDSPL2Q05D32 466 aa25.5■■□□□ 1.67
PDLIM2-216ENST00000464275 ANKIB1Q9P2G1 1089 aa25.5■■□□□ 1.67
PDLIM2-216ENST00000464275 GOLGA8BA8MQT2 603 aa25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 PLSCR1O15162 318 aa25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 STAG1Q8WVM7 1258 aa25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 RBM17Q96I25 401 aaKnown RBP25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 RIOK1Q9BRS2 568 aaKnown RBP25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 ZSCAN16Q9H4T2 348 aaPredicted RBP25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 HPS5Q9UPZ3 1129 aa25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 ANKRD31Q8N7Z5 1873 aa25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 MFSD6Q6ZSS7 791 aa25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 KLHL34Q8N239 644 aa25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 ANO8Q9HCE9 1232 aaPredicted RBP25.49■■□□□ 1.67
PDLIM2-216ENST00000464275 LAMB1P07942 1786 aa25.48■■□□□ 1.67
PDLIM2-216ENST00000464275 RESTQ13127 1097 aa25.48■■□□□ 1.67
PDLIM2-216ENST00000464275 LRSAM1Q6UWE0 723 aa25.48■■□□□ 1.67
PDLIM2-216ENST00000464275 NRXN2Q9P2S2 1712 aa25.48■■□□□ 1.67
PDLIM2-216ENST00000464275 MYH2Q9UKX2 1941 aa25.48■■□□□ 1.67
PDLIM2-216ENST00000464275 IGSF3O75054 1194 aa25.47■■□□□ 1.67
PDLIM2-216ENST00000464275 TXNRD3Q86VQ6 643 aa25.47■■□□□ 1.67
PDLIM2-216ENST00000464275 NSUN4Q96CB9 384 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-216ENST00000464275 LRRC37AA6NMS7 1700 aa25.47■■□□□ 1.67
PDLIM2-216ENST00000464275 POLRMTO00411 1230 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-216ENST00000464275 DDR1Q08345 913 aa25.47■■□□□ 1.67
PDLIM2-216ENST00000464275 C15orf52Q6ZUT6 534 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-216ENST00000464275 RNF41Q9H4P4 317 aaPredicted RBP25.47■■□□□ 1.67
PDLIM2-216ENST00000464275 ECM29Q5VYK3 1845 aa25.46■■□□□ 1.67
PDLIM2-216ENST00000464275 ELP1O95163 1332 aa25.46■■□□□ 1.67
PDLIM2-216ENST00000464275 CHAF1AQ13111 956 aaPredicted RBP25.46■■□□□ 1.67
PDLIM2-216ENST00000464275 NKX2-3Q8TAU0 364 aa25.46■■□□□ 1.67
PDLIM2-216ENST00000464275 IGDCC4Q8TDY8 1250 aa25.46■■□□□ 1.67
PDLIM2-216ENST00000464275 ZNF384Q8TF68 577 aa25.46■■□□□ 1.67
PDLIM2-216ENST00000464275 SPTY2D1Q68D10 685 aaPredicted RBP25.45■■□□□ 1.67
PDLIM2-216ENST00000464275 SCAND2PQ9GZW5 306 aaPredicted RBP25.45■■□□□ 1.67
PDLIM2-216ENST00000464275 ANAPC4Q9UJX5 808 aa25.45■■□□□ 1.67
PDLIM2-216ENST00000464275 TACC3Q9Y6A5 838 aa25.45■■□□□ 1.67
PDLIM2-216ENST00000464275 MECOMQ03112 1051 aa25.45■■□□□ 1.66
PDLIM2-216ENST00000464275 PPARAQ07869 468 aa25.45■■□□□ 1.66
PDLIM2-216ENST00000464275 MTA3Q9BTC8 594 aa25.45■■□□□ 1.66
PDLIM2-216ENST00000464275 BRIP1Q9BX63 1249 aa25.45■■□□□ 1.66
PDLIM2-216ENST00000464275 ZSWIM5Q9P217 1185 aa25.45■■□□□ 1.66
PDLIM2-216ENST00000464275 RGPD3A6NKT7 1758 aaPredicted RBP25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 RGPD4Q7Z3J3 1758 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 HOXA10P31260 410 aaPredicted RBP25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 LIFRP42702 1097 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 DYNLL1P63167 89 aaKnown RBP25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 GIMAP6Q6P9H5 292 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 SGMS1Q86VZ5 419 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 SDR42E1Q8WUS8 393 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 INCENPQ9NQS7 918 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 TNS1Q9HBL0 1735 aaKnown RBP25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 CPLX1O14810 134 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 KDM4AO75164 1064 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 BBOX1O75936 387 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 FDPSP14324 419 aaKnown RBP25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 TMEM67Q5HYA8 995 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 FAM173BQ6P4H8 233 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 ZNF804AQ7Z570 1209 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 LY9Q9HBG7 655 aa25.44■■□□□ 1.66
PDLIM2-216ENST00000464275 DUOX1Q9NRD9 1551 aa25.43■■□□□ 1.66
PDLIM2-216ENST00000464275 APBA3O96018 575 aa25.43■■□□□ 1.66
PDLIM2-216ENST00000464275 ATP2B4P23634 1241 aa25.43■■□□□ 1.66
PDLIM2-216ENST00000464275 TTC6Q86TZ1 520 aa25.43■■□□□ 1.66
PDLIM2-216ENST00000464275 TDRD7Q8NHU6 1098 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-216ENST00000464275 AKT1S1Q96B36 256 aa25.43■■□□□ 1.66
PDLIM2-216ENST00000464275 CRAMP1Q96RY5 1269 aa25.43■■□□□ 1.66
PDLIM2-216ENST00000464275 SYCE3A1L190 88 aa25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 KLRG2A4D1S0 409 aaPredicted RBP25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 GPSM2P81274 684 aa25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 WDR66Q8TBY9 1149 aa25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 DLEC1Q9Y238 1755 aa25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 IFIT3O14879 490 aaKnown RBP25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 METAP2P50579 478 aaKnown RBP eCLIP25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 ZNF827Q17R98 1081 aa25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 APOA5Q6Q788 366 aa25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 ZSCAN30Q86W11 494 aa25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 PDLIM2Q96JY6 352 aa25.42■■□□□ 1.66
PDLIM2-216ENST00000464275 PRDX5P30044 214 aa25.41■■□□□ 1.66
PDLIM2-216ENST00000464275 CCDC183Q5T5S1 534 aa25.41■■□□□ 1.66
PDLIM2-216ENST00000464275 NFXL1Q6ZNB6 911 aa25.41■■□□□ 1.66
PDLIM2-216ENST00000464275 LTBP1Q14766 1721 aa25.41■■□□□ 1.66
PDLIM2-216ENST00000464275 MINDY4BA8MYZ0 360 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 NLGN1Q8N2Q7 840 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 RGS22Q8NE09 1264 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 SPATA32Q96LK8 384 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 TOMM22Q9NS69 142 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 ORC3Q9UBD5 711 aaPredicted RBP25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 ZBTB43O43298 467 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms