RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 MAGEB6P1A0A0J9YX57 407 aa16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 WNT10BO00744 389 aa16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 SGSM2O43147 1006 aa16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 HIRAP54198 1017 aaPredicted RBP16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 DLGAP5Q15398 846 aa16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 LCORLQ8N3X6 602 aa16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 TRPM4Q8TD43 1214 aa16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 STRBPQ96SI9 672 aaKnown RBP16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 ESYT1Q9BSJ8 1104 aa16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 AATFQ9NY61 560 aaKnown RBP eCLIP16.71■□□□□ 0.27
PHACTR4-203ENST00000463428 GPAA1O43292 621 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 MBD4O95243 580 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 BAG3O95817 575 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 LMOD1P29536 600 aaPredicted RBP16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 RBM5P52756 815 aaKnown RBP eCLIP16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 TBC1D10BQ4KMP7 808 aaPredicted RBP16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 CDC42EP5Q6NZY7 148 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 CCDC129Q6ZRS4 1044 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 ARMT1Q9H993 441 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 KIF4BQ2VIQ3 1234 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 NBPF9Q3BBW0 867 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 RUFY2Q8WXA3 655 aa16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 TDRD3Q9H7E2 651 aaKnown RBP16.7■□□□□ 0.26
PHACTR4-203ENST00000463428 RAD50Q92878 1312 aa16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 FOCADQ5VW36 1801 aa16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 POLR2AP24928 1970 aaKnown RBP16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 FOXP2O15409 715 aa16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 EPHX2P34913 555 aa16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 CERS3Q8IU89 383 aa16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 TAF1DQ9H5J8 278 aaPredicted RBP16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
PHACTR4-203ENST00000463428 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
PHACTR4-203ENST00000463428 PRKAB2O43741 272 aa16.68■□□□□ 0.26
PHACTR4-203ENST00000463428 WDHD1O75717 1129 aaPredicted RBP16.68■□□□□ 0.26
PHACTR4-203ENST00000463428 SPDYE2Q495Y8 402 aa16.68■□□□□ 0.26
PHACTR4-203ENST00000463428 NOL10Q9BSC4 688 aaKnown RBP16.68■□□□□ 0.26
PHACTR4-203ENST00000463428 RRAGCQ9HB90 399 aa16.68■□□□□ 0.26
PHACTR4-203ENST00000463428 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
PHACTR4-203ENST00000463428 PLCG2P16885 1265 aa16.67■□□□□ 0.26
PHACTR4-203ENST00000463428 VPS53Q5VIR6 699 aa16.67■□□□□ 0.26
PHACTR4-203ENST00000463428 CASC1Q6TDU7 716 aa16.67■□□□□ 0.26
PHACTR4-203ENST00000463428 USP50Q70EL3 339 aaPredicted RBP16.67■□□□□ 0.26
PHACTR4-203ENST00000463428 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
PHACTR4-203ENST00000463428 ASTN2O75129 1339 aaPredicted RBP16.67■□□□□ 0.26
PHACTR4-203ENST00000463428 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
PHACTR4-203ENST00000463428 VEGFAP15692 232 aaPredicted RBP16.66■□□□□ 0.26
PHACTR4-203ENST00000463428 IDI2Q9BXS1 227 aa16.66■□□□□ 0.26
PHACTR4-203ENST00000463428 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
PHACTR4-203ENST00000463428 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 PATL2C9JE40 543 aaKnown RBP16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 HSPD1P10809 573 aaKnown RBP16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 GNAT2P19087 354 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 CACNB3P54284 484 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 MFAP1P55081 439 aaKnown RBP16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 NFIAQ12857 509 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 FKBP1CQ5VVH2 108 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 TEX11Q8IYF3 940 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 SDR42E1Q8WUS8 393 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 CRNKL1Q9BZJ0 848 aaKnown RBP16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 LSG1Q9H089 658 aaKnown RBP16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 PGAP2Q9UHJ9 254 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 SLC4A4Q9Y6R1 1079 aa16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 BAZ2AQ9UIF9 1905 aaKnown RBP16.65■□□□□ 0.26
PHACTR4-203ENST00000463428 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.25
PHACTR4-203ENST00000463428 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
PHACTR4-203ENST00000463428 SEC24BO95487 1268 aa16.64■□□□□ 0.25
PHACTR4-203ENST00000463428 PTH1RQ03431 593 aa16.64■□□□□ 0.25
PHACTR4-203ENST00000463428 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
PHACTR4-203ENST00000463428 EPB41L4AQ9HCS5 686 aaPredicted RBP16.64■□□□□ 0.25
PHACTR4-203ENST00000463428 MYH1P12882 1939 aa16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 MYO1BO43795 1136 aa16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 ALX1Q15699 326 aa16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 IFNL3Q8IZI9 196 aa16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 ZNF526Q8TF50 670 aaPredicted RBP16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 DSCC1Q9BVC3 393 aa16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 DCP1AQ9NPI6 582 aaPredicted RBP16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 ATP8A2Q9NTI2 1148 aa16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 CNTNAP1P78357 1384 aa16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 DDX60LQ5H9U9 1706 aaKnown RBP16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 FLT1P17948 1338 aa16.63■□□□□ 0.25
PHACTR4-203ENST00000463428 ANGEL2Q5VTE6 544 aaKnown RBP16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 GIMAP6Q6P9H5 292 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 ZC3H15Q8WU90 426 aaKnown RBP16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 PITPNM2Q9BZ72 1349 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 NAV1Q8NEY1 1877 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 TCP10L2B9ZVM9 353 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 ENTPD3O75355 529 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms