RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MECOMQ03112 1051 aa15.06■□□□□ 0
VAPB-203ENST00000463370 IFFO2Q5TF58 517 aa15.06■□□□□ 0
VAPB-203ENST00000463370 NAA16Q6N069 864 aaPredicted RBP15.06■□□□□ 0
VAPB-203ENST00000463370 IGDCC4Q8TDY8 1250 aa15.06■□□□□ 0
VAPB-203ENST00000463370 NSUN4Q96CB9 384 aaKnown RBP15.06■□□□□ 0
VAPB-203ENST00000463370 ZSWIM5Q9P217 1185 aa15.06■□□□□ 0
VAPB-203ENST00000463370 ISY1Q9ULR0 285 aaKnown RBP15.06■□□□□ 0
VAPB-203ENST00000463370 ANGEL1Q9UNK9 670 aaKnown RBP15.06■□□□□ 0
VAPB-203ENST00000463370 WDR19Q8NEZ3 1342 aa15.06■□□□□ 0
VAPB-203ENST00000463370 POLRMTO00411 1230 aaKnown RBP15.06■□□□□ 0
VAPB-203ENST00000463370 UBE2HP62256 183 aa15.06■□□□□ 0
VAPB-203ENST00000463370 CACNA1SQ13698 1873 aa15.06■□□□□ 0
VAPB-203ENST00000463370 AKNAD1Q5T1N1 836 aa15.06■□□□□ 0
VAPB-203ENST00000463370 TCHHQ07283 1943 aa15.05■□□□□ 0
VAPB-203ENST00000463370 CYP2D7A0A087X1C5 515 aa15.05■□□□□ 0
VAPB-203ENST00000463370 SEMA3EO15041 775 aa15.05■□□□□ 0
VAPB-203ENST00000463370 PDIA4P13667 645 aaKnown RBP15.05■□□□□ 0
VAPB-203ENST00000463370 HMGN5P82970 282 aaKnown RBP15.05■□□□□ 0
VAPB-203ENST00000463370 EVX2Q03828 476 aa15.05■□□□□ 0
VAPB-203ENST00000463370 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ 0
VAPB-203ENST00000463370 NACAP1Q9BZK3 213 aa15.05■□□□□ 0
VAPB-203ENST00000463370 ST5P78524 1137 aa15.05■□□□□ -0
VAPB-203ENST00000463370 GPSM2P81274 684 aa15.05■□□□□ -0
VAPB-203ENST00000463370 RRP12Q5JTH9 1297 aaKnown RBP15.05■□□□□ -0
VAPB-203ENST00000463370 OTUD7BQ6GQQ9 843 aa15.05■□□□□ -0
VAPB-203ENST00000463370 MYL10Q9BUA6 226 aa15.05■□□□□ -0
VAPB-203ENST00000463370 LY9Q9HBG7 655 aa15.05■□□□□ -0
VAPB-203ENST00000463370 GJB4Q9NTQ9 266 aa15.05■□□□□ -0
VAPB-203ENST00000463370 ADD1P35611 737 aaKnown RBP15.04■□□□□ -0
VAPB-203ENST00000463370 KRT85P78386 507 aa15.04■□□□□ -0
VAPB-203ENST00000463370 MFSD6Q6ZSS7 791 aa15.04■□□□□ -0
VAPB-203ENST00000463370 CCDC144CPQ8IYA2 1237 aa15.04■□□□□ -0
VAPB-203ENST00000463370 ZKSCAN3Q9BRR0 538 aa15.04■□□□□ -0
VAPB-203ENST00000463370 RBSNQ9H1K0 784 aa15.04■□□□□ -0
VAPB-203ENST00000463370 MINDY4BA8MYZ0 360 aa15.04■□□□□ -0
VAPB-203ENST00000463370 APBA3O96018 575 aa15.04■□□□□ -0
VAPB-203ENST00000463370 PPARAQ07869 468 aa15.04■□□□□ -0
VAPB-203ENST00000463370 GRIK5Q16478 980 aa15.04■□□□□ -0
VAPB-203ENST00000463370 STAG1Q8WVM7 1258 aa15.04■□□□□ -0
VAPB-203ENST00000463370 XDHP47989 1333 aa15.03■□□□□ -0
VAPB-203ENST00000463370 CDC27P30260 824 aa15.03■□□□□ -0
VAPB-203ENST00000463370 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
VAPB-203ENST00000463370 ZNF772Q68DY9 489 aaPredicted RBP15.03■□□□□ -0
VAPB-203ENST00000463370 APOA5Q6Q788 366 aa15.03■□□□□ -0
VAPB-203ENST00000463370 LRSAM1Q6UWE0 723 aa15.03■□□□□ -0
VAPB-203ENST00000463370 MICU3Q86XE3 530 aa15.03■□□□□ -0
VAPB-203ENST00000463370 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
VAPB-203ENST00000463370 FTOQ9C0B1 505 aaKnown RBP eCLIP15.03■□□□□ -0
VAPB-203ENST00000463370 TOMM22Q9NS69 142 aa15.03■□□□□ -0
VAPB-203ENST00000463370 AATFQ9NY61 560 aaKnown RBP eCLIP15.03■□□□□ -0
VAPB-203ENST00000463370 PDS5AQ29RF7 1337 aaKnown RBP15.03■□□□□ -0
VAPB-203ENST00000463370 ILDR1Q86SU0 546 aaPredicted RBP15.03■□□□□ -0
VAPB-203ENST00000463370 LEMD3Q9Y2U8 911 aa15.03■□□□□ -0
VAPB-203ENST00000463370 LEO1Q8WVC0 666 aaPredicted RBP15.02■□□□□ -0
VAPB-203ENST00000463370 AKT1S1Q96B36 256 aa15.02■□□□□ -0
VAPB-203ENST00000463370 TMEM87BQ96K49 555 aa15.02■□□□□ -0
VAPB-203ENST00000463370 TIAM2Q8IVF5 1701 aa15.02□□□□□ -0.01
VAPB-203ENST00000463370 IFIT3O14879 490 aaKnown RBP15.02□□□□□ -0.01
VAPB-203ENST00000463370 METAP2P50579 478 aaKnown RBP eCLIP15.02□□□□□ -0.01
VAPB-203ENST00000463370 FAM217BQ9NTX9 383 aaPredicted RBP15.02□□□□□ -0.01
VAPB-203ENST00000463370 UBE2Q2LH0YL09 131 aa15.01□□□□□ -0.01
VAPB-203ENST00000463370 CPLX1O14810 134 aa15.01□□□□□ -0.01
VAPB-203ENST00000463370 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
VAPB-203ENST00000463370 SPATA32Q96LK8 384 aa15.01□□□□□ -0.01
VAPB-203ENST00000463370 AIFM3Q96NN9 605 aa15.01□□□□□ -0.01
VAPB-203ENST00000463370 CNNM2Q9H8M5 875 aa15.01□□□□□ -0.01
VAPB-203ENST00000463370 ORC3Q9UBD5 711 aaPredicted RBP15.01□□□□□ -0.01
VAPB-203ENST00000463370 PLSCR1O15162 318 aa15□□□□□ -0.01
VAPB-203ENST00000463370 UFL1O94874 794 aa15□□□□□ -0.01
VAPB-203ENST00000463370 CEBPZQ03701 1054 aaKnown RBP15□□□□□ -0.01
VAPB-203ENST00000463370 CSPP1Q1MSJ5 1256 aa15□□□□□ -0.01
VAPB-203ENST00000463370 NFXL1Q6ZNB6 911 aa15□□□□□ -0.01
VAPB-203ENST00000463370 SGMS1Q86VZ5 419 aa15□□□□□ -0.01
VAPB-203ENST00000463370 TDRD7Q8NHU6 1098 aaKnown RBP15□□□□□ -0.01
VAPB-203ENST00000463370 PHKBQ93100 1093 aa15□□□□□ -0.01
VAPB-203ENST00000463370 KRT23Q9C075 422 aa15□□□□□ -0.01
VAPB-203ENST00000463370 ZSCAN16Q9H4T2 348 aaPredicted RBP15□□□□□ -0.01
VAPB-203ENST00000463370 ELP1O95163 1332 aa15□□□□□ -0.01
VAPB-203ENST00000463370 PRDM1O75626 825 aa15□□□□□ -0.01
VAPB-203ENST00000463370 NASPP49321 788 aaPredicted RBP15□□□□□ -0.01
VAPB-203ENST00000463370 CTR9Q6PD62 1173 aa15□□□□□ -0.01
VAPB-203ENST00000463370 ANAPC4Q9UJX5 808 aa15□□□□□ -0.01
VAPB-203ENST00000463370 KLRG2A4D1S0 409 aaPredicted RBP14.99□□□□□ -0.01
VAPB-203ENST00000463370 ZBTB43O43298 467 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 DHX16O60231 1041 aaKnown RBP14.99□□□□□ -0.01
VAPB-203ENST00000463370 LIG1P18858 919 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 HOXA10P31260 410 aaPredicted RBP14.99□□□□□ -0.01
VAPB-203ENST00000463370 LIFRP42702 1097 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 SYAP1Q96A49 352 aaPredicted RBP14.99□□□□□ -0.01
VAPB-203ENST00000463370 PGBD1Q96JS3 809 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 BRIP1Q9BX63 1249 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 SCAND2PQ9GZW5 306 aaPredicted RBP14.99□□□□□ -0.01
VAPB-203ENST00000463370 POLLQ9UGP5 575 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 KIF3AQ9Y496 699 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 USP17L12C9JPN9 530 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 USP17L21D6R901 530 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 RANBP6O60518 1105 aaKnown RBP14.99□□□□□ -0.01
VAPB-203ENST00000463370 DIXDC1Q155Q3 683 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 NTRK3Q16288 839 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms