RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 PTK7Q13308 1070 aa6.33□□□□□ -1.4
TRA2B-207ENST00000463328 KIAA0907Q7Z7F0 614 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-207ENST00000463328 METTL3Q86U44 580 aaKnown RBP6.33□□□□□ -1.4
TRA2B-207ENST00000463328 FMN2Q9NZ56 1722 aa6.33□□□□□ -1.4
TRA2B-207ENST00000463328 RRP7AQ9Y3A4 280 aaKnown RBP6.33□□□□□ -1.4
TRA2B-207ENST00000463328 CHMP3Q9Y3E7 222 aa6.33□□□□□ -1.4
TRA2B-207ENST00000463328 ORC4O43929 436 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 ICMTO60725 284 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 RHOBTB3O94955 611 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 INMTO95050 263 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 PAX7P23759 505 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 ZNF131P52739 623 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 KIAA1614Q5VZ46 1190 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 CATIPQ7Z7H3 387 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.32□□□□□ -1.45e-7■□□□□ 10.3
TRA2B-207ENST00000463328 MAFFQ9ULX9 164 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 SPG7Q9UQ90 795 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 ZNF652Q9Y2D9 606 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 RAB27AP51159 221 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 GNAI1P63096 354 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 IQCEQ6IPM2 695 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 NME9Q86XW9 330 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 EFCAB3Q8N7B9 438 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 ZNF713Q8N859 430 aaPredicted RBP6.32□□□□□ -1.4
TRA2B-207ENST00000463328 AKT1S1Q96B36 256 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 SH3KBP1Q96B97 665 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 SKA1Q96BD8 255 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 PGBD4Q96DM1 585 aa6.32□□□□□ -1.4
TRA2B-207ENST00000463328 ZNF496Q96IT1 587 aaPredicted RBP6.32□□□□□ -1.4
TRA2B-207ENST00000463328 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.32□□□□□ -1.47e-10■■□□□ 12.3
TRA2B-207ENST00000463328 DDX41Q9UJV9 622 aaKnown RBP6.32□□□□□ -1.4
TRA2B-207ENST00000463328 KIF16BQ96L93 1317 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 BOLA2-SMG1P6H3BVE0 249 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 VAMP4O75379 141 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 CASP2P42575 452 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 SLC4A3P48751 1232 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 EXOSC9Q06265 439 aaKnown RBP6.31□□□□□ -1.4
TRA2B-207ENST00000463328 MVPQ14764 893 aaKnown RBP6.31□□□□□ -1.4
TRA2B-207ENST00000463328 CFAP161Q6P656 301 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 LVRNQ6Q4G3 990 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 RGL4Q8IZJ4 473 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 VMP1Q96GC9 406 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 ZNF700Q9H0M5 742 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 SNTG2Q9NY99 539 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 PRKAR2BP31323 418 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 INHBEP58166 350 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 ALFQ53S48 1182 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 IL31Q6EBC2 164 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 GLYCTKQ8IVS8 523 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 DZIP1LQ8IYY4 767 aaKnown RBP6.31□□□□□ -1.4
TRA2B-207ENST00000463328 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 SNX21Q969T3 373 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 RWDD1Q9H446 243 aaPredicted RBP6.31□□□□□ -1.4
TRA2B-207ENST00000463328 ATP8A1Q9Y2Q0 1164 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 IPPQ9Y573 584 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 ADGRL3Q9HAR2 1447 aa6.31□□□□□ -1.4
TRA2B-207ENST00000463328 CHL1O00533 1208 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 NCAM1P13591 858 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 SERPINB3P29508 390 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 DDB1Q16531 1140 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 ANKRD45Q5TZF3 282 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 ANO1Q5XXA6 986 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 ATF7IPQ6VMQ6 1270 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 DGKHQ86XP1 1220 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 ANKRD42Q8N9B4 389 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 FLCNQ8NFG4 579 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 ZFPM2Q8WW38 1151 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 RMI1Q9H9A7 625 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 DDX19BQ9UMR2 479 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 RGPD8O14715 1765 aaPredicted RBP6.3□□□□□ -1.4
TRA2B-207ENST00000463328 PEAK1Q9H792 1746 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 NBNO60934 754 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 BAIAP3O94812 1187 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 TNFAIP3P21580 790 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 NEK3P51956 506 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 RASA3Q14644 834 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 PRPF38BQ5VTL8 546 aaKnown RBP6.3□□□□□ -1.4
TRA2B-207ENST00000463328 DEPDC4Q8N2C3 294 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 PPHLN1Q8NEY8 458 aaKnown RBP6.3□□□□□ -1.4
TRA2B-207ENST00000463328 UHMK1Q8TAS1 419 aaKnown RBP6.3□□□□□ -1.4
TRA2B-207ENST00000463328 PANK1Q8TE04 598 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 EPS8L1Q8TE68 723 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 SSH1Q8WYL5 1049 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 CHMP4CQ96CF2 233 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 TRMT2BQ96GJ1 504 aaKnown RBP6.3□□□□□ -1.4
TRA2B-207ENST00000463328 MPP4Q96JB8 637 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 PAIP2Q9BPZ3 127 aaKnown RBP6.3□□□□□ -1.4
TRA2B-207ENST00000463328 SAGE1Q9NXZ1 904 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 PCDHB8Q9UN66 801 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 PCDHB13Q9Y5F0 798 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 ARHGEF10O15013 1369 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 KDRP35968 1356 aa6.3□□□□□ -1.4
TRA2B-207ENST00000463328 MARF1Q9Y4F3 1742 aaKnown RBP6.3□□□□□ -1.4
TRA2B-207ENST00000463328 GOLGA6L6A8MZA4 724 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L15C9J2P7 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L10C9JJH3 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L13C9JLJ4 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L12C9JPN9 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L11C9JVI0 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L21D6R901 530 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms