RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 NAPBQ9H115 298 aa23.7■■□□□ 1.38
PTPN18-207ENST00000462321 MYO3BQ8WXR4 1341 aa23.69■■□□□ 1.38
PTPN18-207ENST00000462321 BECN1Q14457 450 aa23.69■■□□□ 1.38
PTPN18-207ENST00000462321 JDP2Q8WYK2 163 aa23.69■■□□□ 1.38
PTPN18-207ENST00000462321 F8W031 263 aaPredicted RBP23.68■■□□□ 1.38
PTPN18-207ENST00000462321 PSMA5P28066 241 aa23.68■■□□□ 1.38
PTPN18-207ENST00000462321 RASSF7Q02833 373 aa23.68■■□□□ 1.38
PTPN18-207ENST00000462321 ADCK5Q3MIX3 580 aa23.68■■□□□ 1.38
PTPN18-207ENST00000462321 GIMAP6Q6P9H5 292 aa23.68■■□□□ 1.38
PTPN18-207ENST00000462321 JAKMIP1Q96N16 626 aaKnown RBP23.68■■□□□ 1.38
PTPN18-207ENST00000462321 TAF6LQ9Y6J9 622 aa23.68■■□□□ 1.38
PTPN18-207ENST00000462321 PSME4Q14997 1843 aa23.68■■□□□ 1.38
PTPN18-207ENST00000462321 ST18O60284 1047 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 BTDP43251 543 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 SDR42E1Q8WUS8 393 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 MRIQ9BWK5 157 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 DAGLAQ9Y4D2 1042 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 ZNF213O14771 459 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 PLCG2P16885 1265 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 TDO2P48775 406 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 HDLBPQ00341 1268 aaKnown RBP23.67■■□□□ 1.38
PTPN18-207ENST00000462321 RSBN1LQ6PCB5 846 aaPredicted RBP23.67■■□□□ 1.38
PTPN18-207ENST00000462321 HHIPL2Q6UWX4 724 aa23.67■■□□□ 1.38
PTPN18-207ENST00000462321 MYH2Q9UKX2 1941 aa23.66■■□□□ 1.38
PTPN18-207ENST00000462321 RAD17O75943 681 aa23.66■■□□□ 1.38
PTPN18-207ENST00000462321 VIL1P09327 827 aaKnown RBP23.66■■□□□ 1.38
PTPN18-207ENST00000462321 CASTP20810 708 aaKnown RBP23.66■■□□□ 1.38
PTPN18-207ENST00000462321 NEK4P51957 841 aa23.66■■□□□ 1.38
PTPN18-207ENST00000462321 KIAA0825Q8IV33 1275 aa23.66■■□□□ 1.38
PTPN18-207ENST00000462321 TEKT1Q969V4 418 aa23.66■■□□□ 1.38
PTPN18-207ENST00000462321 TBC1D2Q9BYX2 928 aa23.66■■□□□ 1.38
PTPN18-207ENST00000462321 UPF3BQ9BZI7 483 aaKnown RBP23.66■■□□□ 1.38
PTPN18-207ENST00000462321 ZSWIM6Q9HCJ5 1215 aa23.66■■□□□ 1.38
PTPN18-207ENST00000462321 ATP8A2Q9NTI2 1148 aa23.66■■□□□ 1.38
PTPN18-207ENST00000462321 PSMD14O00487 310 aa23.65■■□□□ 1.38
PTPN18-207ENST00000462321 HSCBQ8IWL3 235 aa23.65■■□□□ 1.38
PTPN18-207ENST00000462321 SOCS7O14512 581 aa23.64■■□□□ 1.38
PTPN18-207ENST00000462321 SCNN1DP51172 638 aa23.64■■□□□ 1.38
PTPN18-207ENST00000462321 HAND2P61296 217 aa23.64■■□□□ 1.38
PTPN18-207ENST00000462321 SH3RF3Q8TEJ3 882 aaPredicted RBP23.64■■□□□ 1.38
PTPN18-207ENST00000462321 CRKP46108 304 aa23.64■■□□□ 1.37
PTPN18-207ENST00000462321 STOX1Q6ZVD7 989 aa23.64■■□□□ 1.37
PTPN18-207ENST00000462321 DCP1AQ9NPI6 582 aaPredicted RBP23.64■■□□□ 1.37
PTPN18-207ENST00000462321 CYP46A1Q9Y6A2 500 aa23.64■■□□□ 1.37
PTPN18-207ENST00000462321 E7EWF7 191 aa23.63■■□□□ 1.37
PTPN18-207ENST00000462321 CD2BP2O95400 341 aaKnown RBP23.63■■□□□ 1.37
PTPN18-207ENST00000462321 RHBDL3P58872 404 aa23.63■■□□□ 1.37
PTPN18-207ENST00000462321 BLOC1S2Q6QNY1 142 aa23.63■■□□□ 1.37
PTPN18-207ENST00000462321 RUFY3Q7L099 469 aa23.63■■□□□ 1.37
PTPN18-207ENST00000462321 NEK1Q96PY6 1258 aa23.63■■□□□ 1.37
PTPN18-207ENST00000462321 SERPINA10Q9UK55 444 aa23.63■■□□□ 1.37
PTPN18-207ENST00000462321 LAMA4Q16363 1823 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 PRELPP51888 382 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 CXCL9Q07325 125 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 ARHGAP27Q6ZUM4 889 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 ZDHHC15Q96MV8 337 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 GMLQ99445 158 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 HMGB1P09429 215 aaKnown RBP23.62■■□□□ 1.37
PTPN18-207ENST00000462321 CIAPIN1Q6FI81 312 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 AGBL3Q8NEM8 1001 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 NBPF3Q9H094 633 aa23.62■■□□□ 1.37
PTPN18-207ENST00000462321 USP5P45974 858 aa23.61■■□□□ 1.37
PTPN18-207ENST00000462321 MCM2P49736 904 aa23.61■■□□□ 1.37
PTPN18-207ENST00000462321 TEX11Q8IYF3 940 aa23.61■■□□□ 1.37
PTPN18-207ENST00000462321 TTC14Q96N46 770 aa23.61■■□□□ 1.37
PTPN18-207ENST00000462321 DAXXQ9UER7 740 aaPredicted RBP23.61■■□□□ 1.37
PTPN18-207ENST00000462321 MKRN1Q9UHC7 482 aaKnown RBP23.61■■□□□ 1.37
PTPN18-207ENST00000462321 TIAM2Q8IVF5 1701 aa23.61■■□□□ 1.37
PTPN18-207ENST00000462321 RPS6KB1P23443 525 aa23.6■■□□□ 1.37
PTPN18-207ENST00000462321 TNIP1Q15025 636 aa23.6■■□□□ 1.37
PTPN18-207ENST00000462321 APOBEC3HQ6NTF7 200 aaKnown RBP23.6■■□□□ 1.37
PTPN18-207ENST00000462321 TBC1D10CQ8IV04 446 aa23.6■■□□□ 1.37
PTPN18-207ENST00000462321 ARPP21Q9UBL0 812 aaPredicted RBP23.6■■□□□ 1.37
PTPN18-207ENST00000462321 ANAPC4Q9UJX5 808 aa23.6■■□□□ 1.37
PTPN18-207ENST00000462321 FZD9O00144 591 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 LMNB1P20700 586 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 PPARAQ07869 468 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 K7ELQ4 463 aaPredicted RBP23.59■■□□□ 1.37
PTPN18-207ENST00000462321 CPA1P15085 419 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 SBK1Q52WX2 424 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 CTR9Q6PD62 1173 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 TGFBRAP1Q8WUH2 860 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 HDAC9Q9UKV0 1011 aa23.59■■□□□ 1.37
PTPN18-207ENST00000462321 YBX3P16989 372 aaKnown RBP eCLIP23.58■■□□□ 1.37
PTPN18-207ENST00000462321 EIF6P56537 245 aaKnown RBP23.58■■□□□ 1.37
PTPN18-207ENST00000462321 ZBTB12Q9Y330 459 aaPredicted RBP23.58■■□□□ 1.37
PTPN18-207ENST00000462321 ADAMTSL1Q8N6G6 1762 aa23.57■■□□□ 1.36
PTPN18-207ENST00000462321 NCOA7Q8NI08 942 aa23.57■■□□□ 1.36
PTPN18-207ENST00000462321 STAG1Q8WVM7 1258 aa23.57■■□□□ 1.36
PTPN18-207ENST00000462321 ALDH8A1Q9H2A2 487 aaPredicted RBP23.57■■□□□ 1.36
PTPN18-207ENST00000462321 FLT1P17948 1338 aa23.57■■□□□ 1.36
PTPN18-207ENST00000462321 MINDY4BA8MYZ0 360 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 USP17L12C9JPN9 530 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 USP17L21D6R901 530 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 RBM5P52756 815 aaKnown RBP eCLIP23.56■■□□□ 1.36
PTPN18-207ENST00000462321 TRDNQ13061 729 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 COL9A3Q14050 684 aaPredicted RBP23.56■■□□□ 1.36
PTPN18-207ENST00000462321 AKNAD1Q5T1N1 836 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 CDC42EP5Q6NZY7 148 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms