RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 TMEM139Q8IV31 216 aa21.27■□□□□ 0.99
HPS3-204ENST00000462030 FAM177A1Q8N128 213 aaPredicted RBP21.27■□□□□ 0.99
HPS3-204ENST00000462030 APPBP2Q92624 585 aa21.27■□□□□ 0.99
HPS3-204ENST00000462030 NBPF3Q9H094 633 aa21.27■□□□□ 0.99
HPS3-204ENST00000462030 INTS13Q9NVM9 706 aa21.27■□□□□ 0.99
HPS3-204ENST00000462030 PODXL2Q9NZ53 605 aa21.27■□□□□ 0.99
HPS3-204ENST00000462030 ECM29Q5VYK3 1845 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 VWA3AA6NCI4 1184 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 ZFYP08048 801 aaPredicted RBP21.26■□□□□ 0.99
HPS3-204ENST00000462030 HSP90AA4PQ58FG1 418 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 TMCO3Q6UWJ1 677 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 EPC1Q9H2F5 836 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 ZMYM6O95789 1325 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 PPP6R2O75170 966 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 SEC31AO94979 1220 aaKnown RBP21.26■□□□□ 0.99
HPS3-204ENST00000462030 A1BGP04217 495 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 LRRFIP1Q32MZ4 808 aaKnown RBP21.26■□□□□ 0.99
HPS3-204ENST00000462030 FOXP4Q8IVH2 680 aaPredicted RBP21.26■□□□□ 0.99
HPS3-204ENST00000462030 PHKBQ93100 1093 aa21.26■□□□□ 0.99
HPS3-204ENST00000462030 MYH7P12883 1935 aa21.25■□□□□ 0.99
HPS3-204ENST00000462030 CDC27P30260 824 aa21.25■□□□□ 0.99
HPS3-204ENST00000462030 PDE4BQ07343 736 aa21.25■□□□□ 0.99
HPS3-204ENST00000462030 CCDC85AQ96PX6 553 aaPredicted RBP21.25■□□□□ 0.99
HPS3-204ENST00000462030 MAP3K14Q99558 947 aa21.25■□□□□ 0.99
HPS3-204ENST00000462030 ARGLU1Q9NWB6 273 aaPredicted RBP21.25■□□□□ 0.99
HPS3-204ENST00000462030 ZBTB22O15209 634 aa21.24■□□□□ 0.99
HPS3-204ENST00000462030 LONRF3Q496Y0 759 aa21.24■□□□□ 0.99
HPS3-204ENST00000462030 RESP18Q5W5W9 173 aa21.24■□□□□ 0.99
HPS3-204ENST00000462030 CYB5R4Q7L1T6 521 aa21.24■□□□□ 0.99
HPS3-204ENST00000462030 SENP2Q9HC62 589 aa21.24■□□□□ 0.99
HPS3-204ENST00000462030 METAP2P50579 478 aaKnown RBP eCLIP21.24■□□□□ 0.99
HPS3-204ENST00000462030 CCDC191Q8NCU4 936 aa21.24■□□□□ 0.99
HPS3-204ENST00000462030 PPP2R2CQ9Y2T4 447 aa21.24■□□□□ 0.99
HPS3-204ENST00000462030 ALS2Q96Q42 1657 aa21.24■□□□□ 0.99
HPS3-204ENST00000462030 FOXN1O15353 648 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 BMP6P22004 513 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 CYP2C19P33261 490 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 GNL2Q13823 731 aaKnown RBP21.23■□□□□ 0.99
HPS3-204ENST00000462030 OLFM4Q6UX06 510 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 TBC1D10CQ8IV04 446 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 SRRTQ9BXP5 876 aaKnown RBP21.23■□□□□ 0.99
HPS3-204ENST00000462030 ATG3Q9NT62 314 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 ANGEL1Q9UNK9 670 aaKnown RBP21.23■□□□□ 0.99
HPS3-204ENST00000462030 PCDHA5Q9Y5H7 936 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 PKD1L3Q7Z443 1732 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 FAM237AA0A1B0GTK4 181 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 FAM193AP78312 1265 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 JMYQ8N9B5 988 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 WDR19Q8NEZ3 1342 aa21.23■□□□□ 0.99
HPS3-204ENST00000462030 EFCAB8A8MWE9 144 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 UBE2Q2LH0YL09 131 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 CHRNA2Q15822 529 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 FCHSD1Q86WN1 690 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 COL18A1P39060 1754 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 ARHGAP6O43182 974 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 ZSCAN12O43309 604 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 CCDC57Q2TAC2 916 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 KRBA2Q6ZNG9 492 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 MICU3Q86XE3 530 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 CREBRFQ8IUR6 639 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 CNNM3Q8NE01 707 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 WDR24Q96S15 920 aa21.22■□□□□ 0.99
HPS3-204ENST00000462030 SPECC1Q5M775 1068 aa21.21■□□□□ 0.99
HPS3-204ENST00000462030 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
HPS3-204ENST00000462030 SH2B2O14492 632 aaPredicted RBP21.21■□□□□ 0.99
HPS3-204ENST00000462030 KCNH3Q9ULD8 1083 aa21.21■□□□□ 0.99
HPS3-204ENST00000462030 POLR3GO15318 223 aaPredicted RBP21.2■□□□□ 0.98
HPS3-204ENST00000462030 TRDNQ13061 729 aa21.2■□□□□ 0.98
HPS3-204ENST00000462030 CCDC102BQ68D86 513 aa21.2■□□□□ 0.98
HPS3-204ENST00000462030 APOA5Q6Q788 366 aa21.2■□□□□ 0.98
HPS3-204ENST00000462030 CABLES1Q8TDN4 633 aa21.2■□□□□ 0.98
HPS3-204ENST00000462030 DDX17Q92841 729 aaKnown RBP21.2■□□□□ 0.98
HPS3-204ENST00000462030 AKAP2Q9Y2D5 859 aa21.2■□□□□ 0.98
HPS3-204ENST00000462030 SASH3O75995 380 aa21.2■□□□□ 0.98
HPS3-204ENST00000462030 TBX2Q13207 712 aaPredicted RBP21.2■□□□□ 0.98
HPS3-204ENST00000462030 PDILTQ8N807 584 aa21.2■□□□□ 0.98
HPS3-204ENST00000462030 BAG1Q99933 345 aaPredicted RBP21.2■□□□□ 0.98
HPS3-204ENST00000462030 MYL10Q9BUA6 226 aa21.2■□□□□ 0.98
HPS3-204ENST00000462030 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.2■□□□□ 0.98
HPS3-204ENST00000462030 RANBP6O60518 1105 aaKnown RBP21.19■□□□□ 0.98
HPS3-204ENST00000462030 CUTAO60888 179 aa21.19■□□□□ 0.98
HPS3-204ENST00000462030 GNG11P61952 73 aa21.19■□□□□ 0.98
HPS3-204ENST00000462030 TOGARAM2Q6ZUX3 1019 aa21.19■□□□□ 0.98
HPS3-204ENST00000462030 C1orf167Q5SNV9 1468 aa21.19■□□□□ 0.98
HPS3-204ENST00000462030 B4E1Z4 1266 aa21.19■□□□□ 0.98
HPS3-204ENST00000462030 CDKL5O76039 1030 aa21.19■□□□□ 0.98
HPS3-204ENST00000462030 MPHOSPH8Q99549 860 aa21.19■□□□□ 0.98
HPS3-204ENST00000462030 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.19■□□□□ 0.98
HPS3-204ENST00000462030 ADKP55263 362 aaKnown RBP21.18■□□□□ 0.98
HPS3-204ENST00000462030 TC2NQ8N9U0 490 aa21.18■□□□□ 0.98
HPS3-204ENST00000462030 CALCOCO1Q9P1Z2 691 aa21.18■□□□□ 0.98
HPS3-204ENST00000462030 MYO5AQ9Y4I1 1855 aaKnown RBP21.18■□□□□ 0.98
HPS3-204ENST00000462030 TBC1D8O95759 1140 aa21.18■□□□□ 0.98
HPS3-204ENST00000462030 CASQ1P31415 396 aa21.18■□□□□ 0.98
HPS3-204ENST00000462030 MCAMP43121 646 aa21.18■□□□□ 0.98
HPS3-204ENST00000462030 FMR1Q06787 632 aaKnown RBP eCLIP21.18■□□□□ 0.982e-10■■■■■ 37.1
HPS3-204ENST00000462030 NTRK3Q16288 839 aa21.18■□□□□ 0.98
HPS3-204ENST00000462030 RGS22Q8NE09 1264 aa21.18■□□□□ 0.98
HPS3-204ENST00000462030 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.18■□□□□ 0.98
HPS3-204ENST00000462030 UBN2Q6ZU65 1347 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms