RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 USP40Q9NVE5 1235 aa10.93□□□□□ -0.66
LDB1-203ENST00000461873 GPR25O00155 361 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 LDHCP07864 332 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 PHKA1P46020 1223 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 GTF2A2P52657 109 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 CACNB3P54284 484 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 GSTO1P78417 241 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 CACNB1Q02641 598 aaPredicted RBP10.92□□□□□ -0.66
LDB1-203ENST00000461873 MLLT1Q03111 559 aaPredicted RBP10.92□□□□□ -0.66
LDB1-203ENST00000461873 TCP10Q12799 353 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 TFCP2Q12800 502 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 CCDC158Q5M9N0 1113 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 IFNL1Q8IU54 200 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 ZNF296Q8WUU4 475 aaPredicted RBP10.92□□□□□ -0.66
LDB1-203ENST00000461873 XAGE2Q96GT9 111 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 CLMNQ96JQ2 1002 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 WRNIP1Q96S55 665 aa10.92□□□□□ -0.66
LDB1-203ENST00000461873 SURF6O75683 361 aaKnown RBP10.91□□□□□ -0.66
LDB1-203ENST00000461873 UQCRFS1P1P0C7P4 283 aa10.91□□□□□ -0.66
LDB1-203ENST00000461873 TTC39AQ5SRH9 613 aa10.91□□□□□ -0.66
LDB1-203ENST00000461873 TMEM57Q8N5G2 664 aa10.91□□□□□ -0.66
LDB1-203ENST00000461873 FAM151AQ8WW52 585 aa10.91□□□□□ -0.66
LDB1-203ENST00000461873 OTUD5Q96G74 571 aa10.91□□□□□ -0.66
LDB1-203ENST00000461873 ERO1AQ96HE7 468 aa10.91□□□□□ -0.66
LDB1-203ENST00000461873 CHMP4BQ9H444 224 aaKnown RBP10.91□□□□□ -0.66
LDB1-203ENST00000461873 ZFYVE28Q9HCC9 887 aa10.91□□□□□ -0.66
LDB1-203ENST00000461873 RAI14Q9P0K7 980 aa10.91□□□□□ -0.66
LDB1-203ENST00000461873 ZBED9Q6R2W3 1325 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 SALL1Q9NSC2 1324 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 CCL15-CCL14A0A0B4J2E2 113 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 PRDX5P30044 214 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 MTX1Q13505 466 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 VGLL4Q14135 290 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 KIF22Q14807 665 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 DIXDC1Q155Q3 683 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 GRIK5Q16478 980 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 CCL15Q16663 113 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 NOM1Q5C9Z4 860 aaKnown RBP10.9□□□□□ -0.66
LDB1-203ENST00000461873 APOBEC3HQ6NTF7 200 aaKnown RBP10.9□□□□□ -0.66
LDB1-203ENST00000461873 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 YTHDC1Q96MU7 727 aaKnown RBP10.9□□□□□ -0.66
LDB1-203ENST00000461873 LRP2BPQ9P2M1 347 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 DAGLAQ9Y4D2 1042 aa10.9□□□□□ -0.66
LDB1-203ENST00000461873 CETPP11597 493 aa10.89□□□□□ -0.67
LDB1-203ENST00000461873 ADORA1P30542 326 aa10.89□□□□□ -0.67
LDB1-203ENST00000461873 SNAPC2Q13487 334 aa10.89□□□□□ -0.67
LDB1-203ENST00000461873 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
LDB1-203ENST00000461873 CDC42EP5Q6NZY7 148 aa10.89□□□□□ -0.67
LDB1-203ENST00000461873 ERO1BQ86YB8 467 aa10.89□□□□□ -0.67
LDB1-203ENST00000461873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.89□□□□□ -0.67
LDB1-203ENST00000461873 TEPSINQ96N21 525 aa10.89□□□□□ -0.67
LDB1-203ENST00000461873 PICK1Q9NRD5 415 aa10.89□□□□□ -0.67
LDB1-203ENST00000461873 TRIM17Q9Y577 477 aa10.89□□□□□ -0.67
LDB1-203ENST00000461873 AOX1Q06278 1338 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 MYH2Q9UKX2 1941 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 BAG3O95817 575 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 ATP8B2P98198 1209 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 PICALMQ13492 652 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 RASGRF1Q13972 1273 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 HSP90AB4PQ58FF6 505 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 FBXO46Q6PJ61 603 aaPredicted RBP10.88□□□□□ -0.67
LDB1-203ENST00000461873 ERC1Q8IUD2 1116 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.88□□□□□ -0.67
LDB1-203ENST00000461873 SPATA5Q8NB90 893 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 CFHR5Q9BXR6 569 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 TRIM34Q9BYJ4 488 aa10.88□□□□□ -0.67
LDB1-203ENST00000461873 PDS5AQ29RF7 1337 aaKnown RBP10.87□□□□□ -0.67
LDB1-203ENST00000461873 SSC5DA1L4H1 1573 aa10.87□□□□□ -0.67
LDB1-203ENST00000461873 PNMA6EA0A0J9YXQ4 647 aa10.87□□□□□ -0.67
LDB1-203ENST00000461873 BTDP43251 543 aa10.87□□□□□ -0.67
LDB1-203ENST00000461873 SP3Q02447 781 aa10.87□□□□□ -0.67
LDB1-203ENST00000461873 PPATQ06203 517 aa10.87□□□□□ -0.67
LDB1-203ENST00000461873 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.87□□□□□ -0.67
LDB1-203ENST00000461873 ZKSCAN4Q969J2 545 aaPredicted RBP10.87□□□□□ -0.67
LDB1-203ENST00000461873 C1orf115Q9H7X2 142 aa10.87□□□□□ -0.67
LDB1-203ENST00000461873 RPAP1Q9BWH6 1393 aaPredicted RBP10.87□□□□□ -0.67
LDB1-203ENST00000461873 SPDYE5A6NIY4 337 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 IGF2BP3O00425 579 aaKnown RBP eCLIP10.86□□□□□ -0.67
LDB1-203ENST00000461873 HMMRO75330 724 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 ENTPD3O75355 529 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 MAP4K4O95819 1239 aaPredicted RBP10.86□□□□□ -0.67
LDB1-203ENST00000461873 PLCG2P16885 1265 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 RGS3P49796 1198 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 CRHR2Q13324 411 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 PPIL2Q13356 520 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 EFCC1Q9HA90 598 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 GPR108Q9NPR9 543 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 TNNQ9UQP3 1299 aa10.86□□□□□ -0.67
LDB1-203ENST00000461873 MROH7-TTC4A0A0A0MT08 1334 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 TESPA1A2RU30 521 aaPredicted RBP10.85□□□□□ -0.67
LDB1-203ENST00000461873 ZBTB22O15209 634 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 SOX10P56693 466 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 MECOMQ03112 1051 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 TNNI3KQ59H18 835 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 NAA16Q6N069 864 aaPredicted RBP10.85□□□□□ -0.67
LDB1-203ENST00000461873 NBPF11Q86T75 865 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 CDAN1Q8IWY9 1227 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 IDI2Q9BXS1 227 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms