RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 FAM83AQ86UY5 434 aa11.39□□□□□ -0.59
BRCA1-207ENST00000461798 ANKRD13AQ8IZ07 590 aa11.39□□□□□ -0.59
BRCA1-207ENST00000461798 SIL1Q9H173 461 aa11.39□□□□□ -0.59
BRCA1-207ENST00000461798 PA2G4Q9UQ80 394 aaKnown RBP11.39□□□□□ -0.59
BRCA1-207ENST00000461798 SALL1Q9NSC2 1324 aa11.38□□□□□ -0.59
BRCA1-207ENST00000461798 TCP10L2B9ZVM9 353 aa11.38□□□□□ -0.59
BRCA1-207ENST00000461798 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
BRCA1-207ENST00000461798 ALDH1A1P00352 501 aa11.38□□□□□ -0.59
BRCA1-207ENST00000461798 RGS19P49795 217 aa11.38□□□□□ -0.59
BRCA1-207ENST00000461798 WNK4Q96J92 1243 aa11.38□□□□□ -0.59
BRCA1-207ENST00000461798 CLMNQ96JQ2 1002 aa11.38□□□□□ -0.59
BRCA1-207ENST00000461798 DENND2AQ9ULE3 1009 aa11.38□□□□□ -0.59
BRCA1-207ENST00000461798 CASP8AP2Q9UKL3 1982 aa11.37□□□□□ -0.59
BRCA1-207ENST00000461798 TESPA1A2RU30 521 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-207ENST00000461798 GPR25O00155 361 aa11.37□□□□□ -0.59
BRCA1-207ENST00000461798 TBC1D8O95759 1140 aa11.37□□□□□ -0.59
BRCA1-207ENST00000461798 GNAI2P04899 355 aa11.37□□□□□ -0.59
BRCA1-207ENST00000461798 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
BRCA1-207ENST00000461798 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
BRCA1-207ENST00000461798 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
BRCA1-207ENST00000461798 ZKSCAN2Q63HK3 967 aa11.37□□□□□ -0.59
BRCA1-207ENST00000461798 CTU1Q7Z7A3 348 aaKnown RBP11.37□□□□□ -0.59
BRCA1-207ENST00000461798 FRAT1Q92837 279 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-207ENST00000461798 TMEM39BQ9GZU3 492 aa11.37□□□□□ -0.59
BRCA1-207ENST00000461798 TNNQ9UQP3 1299 aa11.37□□□□□ -0.59
BRCA1-207ENST00000461798 PDS5AQ29RF7 1337 aaKnown RBP11.36□□□□□ -0.59
BRCA1-207ENST00000461798 CCDC85CA6NKD9 419 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 GJA5P36382 358 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 PHKA1P46020 1223 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 TIMM10P62072 90 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 CCDC102BQ68D86 513 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-207ENST00000461798 IFNL1Q8IU54 200 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 ZNF296Q8WUU4 475 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-207ENST00000461798 HOOK2Q96ED9 719 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 TMOD2Q9NZR1 351 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 AKAP2Q9Y2D5 859 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 ECM29Q5VYK3 1845 aa11.36□□□□□ -0.59
BRCA1-207ENST00000461798 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 LDHBP07195 334 aaKnown RBP11.35□□□□□ -0.59
BRCA1-207ENST00000461798 ADORA1P30542 326 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 CACNB3P54284 484 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 TFCP2Q12800 502 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 PKN2Q16513 984 aaKnown RBP11.35□□□□□ -0.59
BRCA1-207ENST00000461798 ZGPATQ8N5A5 531 aaKnown RBP11.35□□□□□ -0.59
BRCA1-207ENST00000461798 TMEM57Q8N5G2 664 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.35□□□□□ -0.59
BRCA1-207ENST00000461798 FAM151AQ8WW52 585 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 R3HDMLQ9H3Y0 253 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 DAGLAQ9Y4D2 1042 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
BRCA1-207ENST00000461798 RPAP1Q9BWH6 1393 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-207ENST00000461798 A0A1B0GUL7 405 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 IGF2BP3O00425 579 aaKnown RBP eCLIP11.34□□□□□ -0.59
BRCA1-207ENST00000461798 FKTNO75072 461 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 PRDX5P30044 214 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 MVPQ14764 893 aaKnown RBP11.34□□□□□ -0.59
BRCA1-207ENST00000461798 DIXDC1Q155Q3 683 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 OTUD7BQ6GQQ9 843 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 CDC42EP5Q6NZY7 148 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 XAGE2Q96GT9 111 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
BRCA1-207ENST00000461798 PNMA6EA0A0J9YXQ4 647 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 ZBTB7BO15156 539 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-207ENST00000461798 ATP8B2P98198 1209 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.6
BRCA1-207ENST00000461798 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 VGLL4Q14135 290 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 SSH3Q8TE77 659 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 OPTNQ96CV9 577 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 PTPN18Q99952 460 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 ELP3Q9H9T3 547 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 GPR108Q9NPR9 543 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-207ENST00000461798 CSADQ9Y600 493 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-207ENST00000461798 GAKO14976 1311 aa11.33□□□□□ -0.6
BRCA1-207ENST00000461798 SPDYE5A6NIY4 337 aa11.32□□□□□ -0.6
BRCA1-207ENST00000461798 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
BRCA1-207ENST00000461798 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-207ENST00000461798 ERO1BQ86YB8 467 aa11.32□□□□□ -0.6
BRCA1-207ENST00000461798 IDI2Q9BXS1 227 aa11.32□□□□□ -0.6
BRCA1-207ENST00000461798 USP40Q9NVE5 1235 aa11.32□□□□□ -0.6
BRCA1-207ENST00000461798 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
BRCA1-207ENST00000461798 GTF2A2P52657 109 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 NFIAQ12857 509 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 BRI3BPQ8WY22 251 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 NEUROD6Q96NK8 337 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 ZNF341Q9BYN7 854 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 HMG20BQ9P0W2 317 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
BRCA1-207ENST00000461798 SNCAIPQ9Y6H5 919 aa11.31□□□□□ -0.6
BRCA1-207ENST00000461798 ENTPD3O75355 529 aa11.3□□□□□ -0.6
BRCA1-207ENST00000461798 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-207ENST00000461798 RLBP1P12271 317 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms