RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KCNK4Q9NYG8 393 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 USP35Q9P2H5 1018 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.77□□□□□ -1.65
HDAC6-212ENST00000461608 SAMM50Q9Y512 469 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 PDE2AO00408 941 aaPredicted RBP4.76□□□□□ -1.65
HDAC6-212ENST00000461608 MED26O95402 600 aa4.76□□□□□ -1.65
HDAC6-212ENST00000461608 C8AP07357 584 aa4.76□□□□□ -1.65
HDAC6-212ENST00000461608 CCDC85BQ15834 202 aaPredicted RBP4.76□□□□□ -1.65
HDAC6-212ENST00000461608 Q6ZS46 218 aa4.76□□□□□ -1.65
HDAC6-212ENST00000461608 DDX54Q8TDD1 881 aaKnown RBP4.76□□□□□ -1.65
HDAC6-212ENST00000461608 UBL7Q96S82 380 aaPredicted RBP4.76□□□□□ -1.65
HDAC6-212ENST00000461608 RSRP1Q9BUV0 290 aa4.76□□□□□ -1.65
HDAC6-212ENST00000461608 ZNF576Q9H609 170 aa4.76□□□□□ -1.65
HDAC6-212ENST00000461608 DDX41Q9UJV9 622 aaKnown RBP4.76□□□□□ -1.65
HDAC6-212ENST00000461608 A0A096LPE4 126 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 A0A1W2PPZ6 126 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 NFKBIEO00221 500 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 PTPRAP18433 802 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 RPS26P62854 115 aaKnown RBP4.75□□□□□ -1.65
HDAC6-212ENST00000461608 PPP2R3AQ06190 1150 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 UVSSAQ2YD98 709 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 VPS37DQ86XT2 251 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 DTX1Q86Y01 620 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 BSNDQ8WZ55 320 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 UTP4Q969X6 686 aaKnown RBP4.75□□□□□ -1.65
HDAC6-212ENST00000461608 NXPE3Q969Y0 559 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 DBNDD2Q9BQY9 259 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 CLEC4MQ9H2X3 399 aaPredicted RBP4.75□□□□□ -1.65
HDAC6-212ENST00000461608 CAPN10Q9HC96 672 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 AKAP2Q9Y2D5 859 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 INPP5FQ9Y2H2 1132 aa4.75□□□□□ -1.65
HDAC6-212ENST00000461608 SART1O43290 800 aaKnown RBP4.74□□□□□ -1.65
HDAC6-212ENST00000461608 SPINK2P20155 84 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 GJA8P48165 433 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 CABP4P57796 275 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 SCARA3Q6AZY7 606 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.74□□□□□ -1.65
HDAC6-212ENST00000461608 RELL1Q8IUW5 271 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 POU5F2Q8N7G0 328 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 GMLQ99445 158 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 CARD10Q9BWT7 1032 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 LACRTQ9GZZ8 138 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 MUC3BQ9H195 1237 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 RASSF4Q9H2L5 321 aa4.74□□□□□ -1.65
HDAC6-212ENST00000461608 LINC01387J3KSC0 135 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 DDX3YO15523 660 aaKnown RBP4.73□□□□□ -1.65
HDAC6-212ENST00000461608 IGSF3O75054 1194 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 ADAM11O75078 769 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 ADAMTS4O75173 837 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 ACPPP15309 386 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 LMNB1P20700 586 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 CDC25BP30305 580 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 GRIA4P48058 902 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 COL9A2Q14055 689 aaPredicted RBP4.73□□□□□ -1.65
HDAC6-212ENST00000461608 ZNF394Q53GI3 561 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 C9orf131Q5VYM1 1079 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 CEP135Q66GS9 1140 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 ZDHHC13Q8IUH4 622 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 KIAA0825Q8IV33 1275 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 TP53INP2Q8IXH6 220 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 ARMC10Q8N2F6 343 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 RASGRP4Q8TDF6 673 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 ASAP3Q8TDY4 903 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 NECAB3Q96P71 396 aaPredicted RBP4.73□□□□□ -1.65
HDAC6-212ENST00000461608 KCNQ5Q9NR82 932 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 GPN3Q9UHW5 284 aaPredicted RBP4.73□□□□□ -1.65
HDAC6-212ENST00000461608 ADGRE2Q9UHX3 823 aa4.73□□□□□ -1.65
HDAC6-212ENST00000461608 B3GALT4O96024 378 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 JUNBP17275 347 aaPredicted RBP4.72□□□□□ -1.65
HDAC6-212ENST00000461608 EPHA1P21709 976 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 LIG3P49916 1009 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 LRRC14Q15048 493 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 RNF43Q68DV7 783 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 TPTE2Q6XPS3 522 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 CCDC84Q86UT8 332 aaPredicted RBP4.72□□□□□ -1.65
HDAC6-212ENST00000461608 WNT8BQ93098 351 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 GPRASP2Q96D09 838 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 FBXL18Q96ME1 805 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 TMEM74Q96NL1 305 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 SPON2Q9BUD6 331 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 EMILIN2Q9BXX0 1053 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 TANGO6Q9C0B7 1094 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 ADAM19Q9H013 955 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 KCNF1Q9H3M0 494 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 ACBD3Q9H3P7 528 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 SOX17Q9H6I2 414 aaPredicted RBP4.72□□□□□ -1.65
HDAC6-212ENST00000461608 SH2B1Q9NRF2 756 aaPredicted RBP4.72□□□□□ -1.65
HDAC6-212ENST00000461608 ATG3Q9NT62 314 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 TMEM39AQ9NV64 488 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 KBTBD4Q9NVX7 518 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 STRIP2Q9ULQ0 834 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 SOX13Q9UN79 622 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 SUPT16HQ9Y5B9 1047 aaKnown RBP4.72□□□□□ -1.65
HDAC6-212ENST00000461608 PCDHGB7Q9Y5F8 929 aa4.72□□□□□ -1.65
HDAC6-212ENST00000461608 H3BRJ5 948 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 ATP2B1P20020 1258 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 GBP2P32456 591 aaPredicted RBP4.71□□□□□ -1.66
HDAC6-212ENST00000461608 RACK1P63244 317 aaKnown RBP4.71□□□□□ -1.66
HDAC6-212ENST00000461608 ARID5AQ03989 594 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms