RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
C9orf78-203ENST00000461539 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.53
C9orf78-203ENST00000461539 CDC42EP5Q6NZY7 148 aa11.71□□□□□ -0.53
C9orf78-203ENST00000461539 CERS3Q8IU89 383 aa11.71□□□□□ -0.53
C9orf78-203ENST00000461539 TEX11Q8IYF3 940 aa11.71□□□□□ -0.53
C9orf78-203ENST00000461539 SH3RF3Q8TEJ3 882 aaPredicted RBP11.71□□□□□ -0.53
C9orf78-203ENST00000461539 PRMT6Q96LA8 375 aaPredicted RBP11.71□□□□□ -0.53
C9orf78-203ENST00000461539 SLC4A4Q9Y6R1 1079 aa11.71□□□□□ -0.53
C9orf78-203ENST00000461539 FER1L6Q2WGJ9 1857 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 CLRN2A0PK11 232 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 PRKAB2O43741 272 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 MYO1BO43795 1136 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 GNAT2P19087 354 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 USP5P45974 858 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 RHBDL3P58872 404 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 VPS53Q5VIR6 699 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 MTMR14Q8NCE2 650 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 SDR42E1Q8WUS8 393 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
C9orf78-203ENST00000461539 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
C9orf78-203ENST00000461539 TMOD2Q9NZR1 351 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 HACL1Q9UJ83 578 aa11.7□□□□□ -0.54
C9orf78-203ENST00000461539 PATL2C9JE40 543 aaKnown RBP11.69□□□□□ -0.54
C9orf78-203ENST00000461539 WNT10BO00744 389 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 SEC24BO95487 1268 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 EGFRP00533 1210 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 HSPD1P10809 573 aaKnown RBP11.69□□□□□ -0.54
C9orf78-203ENST00000461539 PICALMQ13492 652 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 MAPKAPK5Q8IW41 473 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 TRPM4Q8TD43 1214 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 TGFBRAP1Q8WUH2 860 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 NACAP1Q9BZK3 213 aa11.69□□□□□ -0.54
C9orf78-203ENST00000461539 ADARB2Q9NS39 739 aaKnown RBP11.69□□□□□ -0.54
C9orf78-203ENST00000461539 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
C9orf78-203ENST00000461539 IQCA1LA6NCM1 817 aa11.68□□□□□ -0.54
C9orf78-203ENST00000461539 EPHX2P34913 555 aa11.68□□□□□ -0.54
C9orf78-203ENST00000461539 TDO2P48775 406 aa11.68□□□□□ -0.54
C9orf78-203ENST00000461539 CACNB3P54284 484 aa11.68□□□□□ -0.54
C9orf78-203ENST00000461539 PTH1RQ03431 593 aa11.68□□□□□ -0.54
C9orf78-203ENST00000461539 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
C9orf78-203ENST00000461539 ZBED3Q96IU2 234 aaPredicted RBP11.68□□□□□ -0.54
C9orf78-203ENST00000461539 DSCC1Q9BVC3 393 aa11.68□□□□□ -0.54
C9orf78-203ENST00000461539 LSG1Q9H089 658 aaKnown RBP11.68□□□□□ -0.54
C9orf78-203ENST00000461539 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
C9orf78-203ENST00000461539 VEZTQ9HBM0 779 aa11.68□□□□□ -0.54
C9orf78-203ENST00000461539 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
C9orf78-203ENST00000461539 TCP10L2B9ZVM9 353 aa11.67□□□□□ -0.54
C9orf78-203ENST00000461539 WDHD1O75717 1129 aaPredicted RBP11.67□□□□□ -0.54
C9orf78-203ENST00000461539 NFIAQ12857 509 aa11.67□□□□□ -0.54
C9orf78-203ENST00000461539 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
C9orf78-203ENST00000461539 EAPPQ56P03 285 aaPredicted RBP11.67□□□□□ -0.54
C9orf78-203ENST00000461539 NAPBQ9H115 298 aa11.67□□□□□ -0.54
C9orf78-203ENST00000461539 EPB41L4AQ9HCS5 686 aaPredicted RBP11.67□□□□□ -0.54
C9orf78-203ENST00000461539 DCP1AQ9NPI6 582 aaPredicted RBP11.67□□□□□ -0.54
C9orf78-203ENST00000461539 ATP8A2Q9NTI2 1148 aa11.67□□□□□ -0.54
C9orf78-203ENST00000461539 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
C9orf78-203ENST00000461539 U3KPZ7 1027 aaPredicted RBP11.67□□□□□ -0.54
C9orf78-203ENST00000461539 RPAP1Q9BWH6 1393 aaPredicted RBP11.67□□□□□ -0.54
C9orf78-203ENST00000461539 ASTN2O75129 1339 aaPredicted RBP11.66□□□□□ -0.54
C9orf78-203ENST00000461539 FOXP2O15409 715 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 FGAP02671 866 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
C9orf78-203ENST00000461539 TCP10Q12799 353 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 GIMAP6Q6P9H5 292 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 IFNL3Q8IZI9 196 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 MAP4K1Q92918 833 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 IDI2Q9BXS1 227 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 USP26Q9BXU7 913 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 TAF1DQ9H5J8 278 aaPredicted RBP11.66□□□□□ -0.54
C9orf78-203ENST00000461539 RRAGCQ9HB90 399 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 DDX4Q9NQI0 724 aaKnown RBP11.66□□□□□ -0.54
C9orf78-203ENST00000461539 MCM9Q9NXL9 1143 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 GGA3Q9NZ52 723 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 SAP30BPQ9UHR5 308 aaKnown RBP11.66□□□□□ -0.54
C9orf78-203ENST00000461539 CTNNA3Q9UI47 895 aa11.66□□□□□ -0.54
C9orf78-203ENST00000461539 FLT1P17948 1338 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 POTECB2RU33 542 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 USP17L12C9JPN9 530 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 USP17L21D6R901 530 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 POLR3DP05423 398 aaPredicted RBP11.65□□□□□ -0.54
C9orf78-203ENST00000461539 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.54
C9orf78-203ENST00000461539 MCCP23508 829 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 ALX1Q15699 326 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 SLC4A8Q2Y0W8 1093 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 ANGEL2Q5VTE6 544 aaKnown RBP11.65□□□□□ -0.54
C9orf78-203ENST00000461539 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
C9orf78-203ENST00000461539 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
C9orf78-203ENST00000461539 MINDY4BA8MYZ0 360 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 EPB41L2O43491 1005 aaKnown RBP11.64□□□□□ -0.55
C9orf78-203ENST00000461539 ENTPD3O75355 529 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 CYP2D6P10635 497 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 TNNI2P48788 182 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 HAND2P61296 217 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 TNFAIP1Q13829 316 aa11.64□□□□□ -0.55
C9orf78-203ENST00000461539 IMMTQ16891 758 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms