RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 ZNF70Q9UC06 446 aaPredicted RBP11.92□□□□□ -0.5
NECTIN3-202ENST00000461477 PRUNE2Q8WUY3 3088 aa11.92□□□□□ -0.5
NECTIN3-202ENST00000461477 ALPK3Q96L96 1907 aa11.92□□□□□ -0.5
NECTIN3-202ENST00000461477 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 PPP1R37O75864 691 aa11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 DDX58O95786 925 aaKnown RBP11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 GCKRQ14397 625 aa11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 OTUD7BQ6GQQ9 843 aa11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 UBE2Q1Q7Z7E8 422 aa11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 TSR2Q969E8 191 aaKnown RBP11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
NECTIN3-202ENST00000461477 SOX1O00570 391 aaPredicted RBP11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 KCNJ4P48050 445 aa11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 GNAI1P63096 354 aa11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 FOXO4P98177 505 aa11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 CCDC30Q5VVM6 783 aa11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 MPHOSPH8Q99549 860 aa11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 SNCAIPQ9Y6H5 919 aa11.9□□□□□ -0.5
NECTIN3-202ENST00000461477 TCP10L2B9ZVM9 353 aa11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 DLL1O00548 723 aa11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 FKBP1AP62942 108 aaKnown RBP11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 LACTBP83111 547 aaPredicted RBP11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 ZFYVE28Q9HCC9 887 aa11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 MGAMO43451 1857 aa11.89□□□□□ -0.51
NECTIN3-202ENST00000461477 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
NECTIN3-202ENST00000461477 GTF2A2P52657 109 aa11.88□□□□□ -0.51
NECTIN3-202ENST00000461477 CACNB3P54284 484 aa11.88□□□□□ -0.51
NECTIN3-202ENST00000461477 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
NECTIN3-202ENST00000461477 DDX10Q13206 875 aaKnown RBP11.88□□□□□ -0.51
NECTIN3-202ENST00000461477 NBPF11Q86T75 865 aa11.88□□□□□ -0.51
NECTIN3-202ENST00000461477 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
NECTIN3-202ENST00000461477 CDH23Q9H251 3354 aa11.88□□□□□ -0.51
NECTIN3-202ENST00000461477 ADGRA2Q96PE1 1338 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 FAM205CA6NFA0 338 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 MYO1BO43795 1136 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 TLR2O60603 784 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 GYG1P46976 350 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 NEXNQ0ZGT2 675 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 DZIP1LQ8IYY4 767 aaKnown RBP11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 ZKSCAN4Q969J2 545 aaPredicted RBP11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 TRIM47Q96LD4 638 aa11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 TTF2Q9UNY4 1162 aaKnown RBP11.87□□□□□ -0.51
NECTIN3-202ENST00000461477 ANKRD18BA2A2Z9 1011 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 IRF6O14896 467 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 PLIN1O60240 522 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 MOGSQ13724 837 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 C17orf99Q6UX52 265 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 ZNF804AQ7Z570 1209 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 TDRD7Q8NHU6 1098 aaKnown RBP11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 DPF3Q92784 378 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 CPA4Q9UI42 421 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 MUC3AQ02505 3323 aa11.86□□□□□ -0.51
NECTIN3-202ENST00000461477 OSBPP22059 807 aa11.85□□□□□ -0.51
NECTIN3-202ENST00000461477 CRKP46108 304 aa11.85□□□□□ -0.51
NECTIN3-202ENST00000461477 FLIIQ13045 1269 aa11.85□□□□□ -0.51
NECTIN3-202ENST00000461477 MFSD14BQ5SR56 506 aa11.85□□□□□ -0.51
NECTIN3-202ENST00000461477 SLC17A8Q8NDX2 589 aa11.85□□□□□ -0.51
NECTIN3-202ENST00000461477 FAM84BQ96KN1 310 aaPredicted RBP11.85□□□□□ -0.51
NECTIN3-202ENST00000461477 PUS3Q9BZE2 481 aaKnown RBP11.85□□□□□ -0.51
NECTIN3-202ENST00000461477 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
NECTIN3-202ENST00000461477 CCL5P13501 91 aa11.84□□□□□ -0.51
NECTIN3-202ENST00000461477 GJA8P48165 433 aa11.84□□□□□ -0.51
NECTIN3-202ENST00000461477 DNAAF4Q8WXU2 420 aa11.84□□□□□ -0.51
NECTIN3-202ENST00000461477 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
NECTIN3-202ENST00000461477 SRRDQ9UH36 339 aa11.84□□□□□ -0.51
NECTIN3-202ENST00000461477 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
NECTIN3-202ENST00000461477 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 F6X3S4 739 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 CETPP11597 493 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 INPP5BP32019 993 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 PSMC4P43686 418 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 TNFAIP1Q13829 316 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 LMBR1LQ6UX01 489 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 ERO1BQ86YB8 467 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 WRNIP1Q96S55 665 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 GABRQQ9UN88 632 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 RIPOR2Q9Y4F9 1068 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 CSADQ9Y600 493 aa11.83□□□□□ -0.52
NECTIN3-202ENST00000461477 DOCK3Q8IZD9 2030 aa11.82□□□□□ -0.52
NECTIN3-202ENST00000461477 GRK4P32298 578 aa11.82□□□□□ -0.52
NECTIN3-202ENST00000461477 PRKCZQ05513 592 aa11.82□□□□□ -0.52
NECTIN3-202ENST00000461477 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
NECTIN3-202ENST00000461477 PPIL2Q13356 520 aa11.82□□□□□ -0.52
NECTIN3-202ENST00000461477 TWISTNBQ3B726 338 aaPredicted RBP11.82□□□□□ -0.52
NECTIN3-202ENST00000461477 BEND3Q5T5X7 828 aa11.82□□□□□ -0.52
NECTIN3-202ENST00000461477 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms