RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 MAGEB6P1A0A0J9YX57 407 aa23.68■■□□□ 1.38
CCM2-203ENST00000461377 CPLX1O14810 134 aa23.68■■□□□ 1.38
CCM2-203ENST00000461377 ATL3Q6DD88 541 aa23.68■■□□□ 1.38
CCM2-203ENST00000461377 SGMS1Q86VZ5 419 aa23.68■■□□□ 1.38
CCM2-203ENST00000461377 LY9Q9HBG7 655 aa23.68■■□□□ 1.38
CCM2-203ENST00000461377 ORC3Q9UBD5 711 aaPredicted RBP23.68■■□□□ 1.38
CCM2-203ENST00000461377 ZBTB22O15209 634 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 APOA5Q6Q788 366 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 MFSD6Q6ZSS7 791 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 RIOK1Q9BRS2 568 aaKnown RBP23.67■■□□□ 1.38
CCM2-203ENST00000461377 MYH15Q9Y2K3 1946 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 LIG1P18858 919 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 LIFRP42702 1097 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 METAP2P50579 478 aaKnown RBP eCLIP23.67■■□□□ 1.38
CCM2-203ENST00000461377 RNF214Q8ND24 703 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 PGBD1Q96JS3 809 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 FUCA2Q9BTY2 467 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 QTRT2Q9H974 415 aaKnown RBP23.67■■□□□ 1.38
CCM2-203ENST00000461377 SENP2Q9HC62 589 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 ZSWIM5Q9P217 1185 aa23.67■■□□□ 1.38
CCM2-203ENST00000461377 IRS2Q9Y4H2 1338 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 GOLGA6L4A6NEF3 574 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 NPHP1O15259 732 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 KDM4AO75164 1064 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 HIBADHP31937 336 aaKnown RBP23.66■■□□□ 1.38
CCM2-203ENST00000461377 GUCY1B3Q02153 619 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 TMEM67Q5HYA8 995 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 RGS22Q8NE09 1264 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 PDLIM2Q96JY6 352 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 CHD4Q14839 1912 aa23.66■■□□□ 1.38
CCM2-203ENST00000461377 ILDR1Q86SU0 546 aaPredicted RBP23.65■■□□□ 1.38
CCM2-203ENST00000461377 CNBD1Q8NA66 436 aa23.65■■□□□ 1.38
CCM2-203ENST00000461377 ZNF384Q8TF68 577 aa23.65■■□□□ 1.38
CCM2-203ENST00000461377 TRIM44Q96DX7 344 aaPredicted RBP23.65■■□□□ 1.38
CCM2-203ENST00000461377 C8orf76Q96K31 380 aa23.65■■□□□ 1.38
CCM2-203ENST00000461377 ZNF396Q96N95 335 aaPredicted RBP23.65■■□□□ 1.38
CCM2-203ENST00000461377 RCOR1Q9UKL0 485 aa23.65■■□□□ 1.38
CCM2-203ENST00000461377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.65■■□□□ 1.38
CCM2-203ENST00000461377 GIMAP6Q6P9H5 292 aa23.65■■□□□ 1.38
CCM2-203ENST00000461377 PPARAQ07869 468 aa23.64■■□□□ 1.38
CCM2-203ENST00000461377 GRAPQ13588 217 aa23.64■■□□□ 1.38
CCM2-203ENST00000461377 FBXO18Q8NFZ0 1043 aa23.64■■□□□ 1.38
CCM2-203ENST00000461377 GRAPLQ8TC17 118 aaPredicted RBP23.64■■□□□ 1.38
CCM2-203ENST00000461377 MTA3Q9BTC8 594 aa23.64■■□□□ 1.38
CCM2-203ENST00000461377 RNF41Q9H4P4 317 aaPredicted RBP23.64■■□□□ 1.38
CCM2-203ENST00000461377 RRAGDQ9NQL2 400 aaPredicted RBP23.64■■□□□ 1.38
CCM2-203ENST00000461377 TFCP2L1Q9NZI6 479 aa23.64■■□□□ 1.38
CCM2-203ENST00000461377 ANAPC4Q9UJX5 808 aa23.64■■□□□ 1.38
CCM2-203ENST00000461377 UBR3Q6ZT12 1888 aa23.64■■□□□ 1.37
CCM2-203ENST00000461377 IFIT3O14879 490 aaKnown RBP23.63■■□□□ 1.37
CCM2-203ENST00000461377 ZBTB43O43298 467 aa23.63■■□□□ 1.37
CCM2-203ENST00000461377 SDR42E1Q8WUS8 393 aa23.63■■□□□ 1.37
CCM2-203ENST00000461377 CDKL5O76039 1030 aa23.63■■□□□ 1.37
CCM2-203ENST00000461377 SLC27A3Q5K4L6 730 aa23.63■■□□□ 1.37
CCM2-203ENST00000461377 NFXL1Q6ZNB6 911 aa23.63■■□□□ 1.37
CCM2-203ENST00000461377 USP28Q96RU2 1077 aa23.63■■□□□ 1.37
CCM2-203ENST00000461377 NUP62CLQ9H1M0 184 aa23.63■■□□□ 1.37
CCM2-203ENST00000461377 DDX19AQ9NUU7 478 aaKnown RBP23.63■■□□□ 1.37
CCM2-203ENST00000461377 NID2Q14112 1375 aa23.62■■□□□ 1.37
CCM2-203ENST00000461377 CDC27P30260 824 aa23.62■■□□□ 1.37
CCM2-203ENST00000461377 NSUN4Q96CB9 384 aaKnown RBP23.62■■□□□ 1.37
CCM2-203ENST00000461377 DYNLL1P63167 89 aaKnown RBP23.61■■□□□ 1.37
CCM2-203ENST00000461377 UVSSAQ2YD98 709 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 OTUD7BQ6GQQ9 843 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 PRR5LQ6MZQ0 368 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 MICU3Q86XE3 530 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 BRIP1Q9BX63 1249 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 DACT1Q9NYF0 836 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 GOLGA8AA7E2F4 631 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 GYS1P13807 737 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 RXRAP19793 462 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 CPLX2Q6PUV4 134 aaKnown RBP23.61■■□□□ 1.37
CCM2-203ENST00000461377 BICD2Q8TD16 824 aa23.61■■□□□ 1.37
CCM2-203ENST00000461377 FTOQ9C0B1 505 aaKnown RBP eCLIP23.61■■□□□ 1.37
CCM2-203ENST00000461377 FAM217BQ9NTX9 383 aaPredicted RBP23.61■■□□□ 1.37
CCM2-203ENST00000461377 MECOMQ03112 1051 aa23.6■■□□□ 1.37
CCM2-203ENST00000461377 NTRK3Q16288 839 aa23.6■■□□□ 1.37
CCM2-203ENST00000461377 RRP12Q5JTH9 1297 aaKnown RBP23.6■■□□□ 1.37
CCM2-203ENST00000461377 TXNRD3Q86VQ6 643 aa23.6■■□□□ 1.37
CCM2-203ENST00000461377 SLC12A7Q9Y666 1083 aa23.6■■□□□ 1.37
CCM2-203ENST00000461377 CCDC69A6NI79 296 aa23.6■■□□□ 1.37
CCM2-203ENST00000461377 CEBPZQ03701 1054 aaKnown RBP23.6■■□□□ 1.37
CCM2-203ENST00000461377 SART3Q15020 963 aaKnown RBP23.6■■□□□ 1.37
CCM2-203ENST00000461377 TMED8Q6PL24 325 aaPredicted RBP23.6■■□□□ 1.37
CCM2-203ENST00000461377 LEMD3Q9Y2U8 911 aa23.6■■□□□ 1.37
CCM2-203ENST00000461377 MYH13Q9UKX3 1938 aa23.59■■□□□ 1.37
CCM2-203ENST00000461377 MAST2Q6P0Q8 1798 aa23.59■■□□□ 1.37
CCM2-203ENST00000461377 MAP3K11Q16584 847 aa23.59■■□□□ 1.37
CCM2-203ENST00000461377 KRT27Q7Z3Y8 459 aa23.59■■□□□ 1.37
CCM2-203ENST00000461377 CLSTN2Q9H4D0 955 aa23.59■■□□□ 1.37
CCM2-203ENST00000461377 TOMM22Q9NS69 142 aa23.59■■□□□ 1.37
CCM2-203ENST00000461377 CHAF1AQ13111 956 aaPredicted RBP23.58■■□□□ 1.37
CCM2-203ENST00000461377 BRAPQ7Z569 592 aa23.58■■□□□ 1.37
CCM2-203ENST00000461377 MYL10Q9BUA6 226 aa23.58■■□□□ 1.37
CCM2-203ENST00000461377 RTEL1Q9NZ71 1219 aa23.58■■□□□ 1.37
CCM2-203ENST00000461377 MINDY4BA8MYZ0 360 aa23.58■■□□□ 1.36
CCM2-203ENST00000461377 WTAPQ15007 396 aa23.58■■□□□ 1.36
CCM2-203ENST00000461377 RBM43Q6ZSC3 357 aaKnown RBP23.58■■□□□ 1.36
CCM2-203ENST00000461377 ALG1Q9BT22 464 aa23.58■■□□□ 1.36
CCM2-203ENST00000461377 ESPNB1AK53 854 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms