RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.97□□□□□ -0.65
SOX2-OT-202ENST00000461063 WDR66Q8TBY9 1149 aa10.97□□□□□ -0.65
SOX2-OT-202ENST00000461063 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
SOX2-OT-202ENST00000461063 API5Q9BZZ5 524 aaKnown RBP10.97□□□□□ -0.65
SOX2-OT-202ENST00000461063 SIL1Q9H173 461 aa10.97□□□□□ -0.65
SOX2-OT-202ENST00000461063 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
SOX2-OT-202ENST00000461063 MAST3O60307 1309 aa10.97□□□□□ -0.65
SOX2-OT-202ENST00000461063 RARSP54136 660 aaKnown RBP10.96□□□□□ -0.65
SOX2-OT-202ENST00000461063 ATP2B3Q16720 1220 aa10.96□□□□□ -0.65
SOX2-OT-202ENST00000461063 OTOP1Q7RTM1 612 aa10.96□□□□□ -0.65
SOX2-OT-202ENST00000461063 BRI3BPQ8WY22 251 aa10.96□□□□□ -0.65
SOX2-OT-202ENST00000461063 TMOD2Q9NZR1 351 aa10.96□□□□□ -0.65
SOX2-OT-202ENST00000461063 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
SOX2-OT-202ENST00000461063 CSADQ9Y600 493 aa10.96□□□□□ -0.65
SOX2-OT-202ENST00000461063 LRRFIP2Q9Y608 721 aaKnown RBP10.96□□□□□ -0.65
SOX2-OT-202ENST00000461063 SPDYE5A6NIY4 337 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 IL15P40933 162 aaPredicted RBP10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 CD99L2Q8TCZ2 262 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 MEIS3Q99687 375 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 COPRSQ9NQ92 184 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 PA2G4Q9UQ80 394 aaKnown RBP10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 HDAC5Q9UQL6 1122 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 TRIM17Q9Y577 477 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 SNCAIPQ9Y6H5 919 aa10.95□□□□□ -0.66
SOX2-OT-202ENST00000461063 CCL15-CCL14A0A0B4J2E2 113 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 PRDX5P30044 214 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 PHKA1P46020 1223 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 GTF2A2P52657 109 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 CCL15Q16663 113 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 INTS3Q68E01 1043 aaKnown RBP10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 ARHGAP45Q92619 1136 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 ZKSCAN4Q969J2 545 aaPredicted RBP10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 HOOK2Q96ED9 719 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 WRNIP1Q96S55 665 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 GNL3LQ9NVN8 582 aaKnown RBP10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 DAGLAQ9Y4D2 1042 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 LAMB1P07942 1786 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 OTOFQ9HC10 1997 aa10.94□□□□□ -0.66
SOX2-OT-202ENST00000461063 RPAP1Q9BWH6 1393 aaPredicted RBP10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 SEMA3EO15041 775 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 LDHBP07195 334 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 ADORA1P30542 326 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 CAP1Q01518 475 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 SP3Q02447 781 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 DCAF15Q66K64 600 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 CDC42EP5Q6NZY7 148 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 ERO1BQ86YB8 467 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 FAM43AQ8N2R8 423 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 FAM151AQ8WW52 585 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 DENND2AQ9ULE3 1009 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 PTPN22Q9Y2R2 807 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 CENPFP49454 3210 aa10.93□□□□□ -0.66
SOX2-OT-202ENST00000461063 IRF6O14896 467 aa10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 GNAI3P08754 354 aa10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 NFIAQ12857 509 aa10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 TAF1CQ15572 869 aaPredicted RBP10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 CCDC102BQ68D86 513 aa10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 MIGA2Q7L4E1 593 aa10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 ZNF341Q9BYN7 854 aa10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 EFCC1Q9HA90 598 aa10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
SOX2-OT-202ENST00000461063 SRGAP3O43295 1099 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 SLC34A2O95436 690 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 CETPP11597 493 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 INPP5BP32019 993 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 TIMM10P62072 90 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 TCP10Q12799 353 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 TFCP2Q12800 502 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 PPIL2Q13356 520 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 SNAPC2Q13487 334 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 MTX1Q13505 466 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 RASGRF1Q13972 1273 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 USP40Q9NVE5 1235 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 FAM198AQ9UFP1 575 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 ZNF112Q9UJU3 913 aa10.91□□□□□ -0.66
SOX2-OT-202ENST00000461063 BTBD19C9JJ37 291 aa10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 IPO8O15397 1037 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 TRIM27P14373 513 aa10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 PPATQ06203 517 aa10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 ZFPM1Q8IX07 1006 aa10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 MS4A3Q96HJ5 214 aa10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 ZCCHC17Q9NP64 241 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 TNNQ9UQP3 1299 aa10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.9□□□□□ -0.66
SOX2-OT-202ENST00000461063 GAKO14976 1311 aa10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 PDS5AQ29RF7 1337 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 BRCA2P51587 3418 aa10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 PDE4DIPQ5VU43 2346 aa10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 A0A1B0GUL7 405 aa10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 TLR2O60603 784 aa10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 BCAR3O75815 825 aa10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 ATF7IPQ6VMQ6 1270 aa10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 ZGPATQ8N5A5 531 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-202ENST00000461063 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms