RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 VWA5B2Q8N398 1253 aa7.47□□□□□ -1.21
NUP98-208ENST00000461047 CCDC191Q8NCU4 936 aa7.47□□□□□ -1.21
NUP98-208ENST00000461047 LINS1Q8NG48 757 aa7.47□□□□□ -1.21
NUP98-208ENST00000461047 NANOS1Q8WY41 292 aaKnown RBP7.47□□□□□ -1.21
NUP98-208ENST00000461047 SRCIN1Q9C0H9 1055 aa7.47□□□□□ -1.21
NUP98-208ENST00000461047 C9orf78Q9NZ63 289 aaPredicted RBP7.47□□□□□ -1.21
NUP98-208ENST00000461047 NIP7Q9Y221 180 aaKnown RBP eCLIP7.47□□□□□ -1.21
NUP98-208ENST00000461047 PNPLA7Q6ZV29 1317 aa7.47□□□□□ -1.21
NUP98-208ENST00000461047 USP42Q9H9J4 1324 aaKnown RBP7.47□□□□□ -1.21
NUP98-208ENST00000461047 UBR2Q8IWV8 1755 aa7.46□□□□□ -1.21
NUP98-208ENST00000461047 ALDH1L1O75891 902 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 ABL2P42684 1182 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 SCTRP47872 440 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 TRIM28Q13263 835 aaKnown RBP7.46□□□□□ -1.22
NUP98-208ENST00000461047 BICDL1Q6ZP65 573 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 G2E3Q7L622 706 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 NBPF5PQ86XG9 351 aaPredicted RBP7.46□□□□□ -1.22
NUP98-208ENST00000461047 CNTNAP3BQ96NU0 1288 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 MYD88Q99836 296 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 CNTNAP3Q9BZ76 1288 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 CWC25Q9NXE8 425 aaPredicted RBP7.46□□□□□ -1.22
NUP98-208ENST00000461047 C5P01031 1676 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 LY75O60449 1722 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 TNS1Q9HBL0 1735 aaKnown RBP7.46□□□□□ -1.22
NUP98-208ENST00000461047 RNF123Q5XPI4 1314 aa7.46□□□□□ -1.22
NUP98-208ENST00000461047 C4BP0C0L5 1744 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 GYS1P13807 737 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 RHOQP17081 205 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 ST5P78524 1137 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 WASHC4Q2M389 1173 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 LRP10Q7Z4F1 713 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 UTP14AQ9BVJ6 771 aaKnown RBP7.45□□□□□ -1.22
NUP98-208ENST00000461047 COL25A1Q9BXS0 654 aaPredicted RBP7.45□□□□□ -1.22
NUP98-208ENST00000461047 SPON1Q9HCB6 807 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 GDPD2Q9HCC8 539 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
NUP98-208ENST00000461047 SRP68Q9UHB9 627 aaKnown RBP7.45□□□□□ -1.22
NUP98-208ENST00000461047 TRMT112Q9UI30 125 aaKnown RBP7.45□□□□□ -1.22
NUP98-208ENST00000461047 SUPT16HQ9Y5B9 1047 aaKnown RBP7.45□□□□□ -1.22
NUP98-208ENST00000461047 F6X3S4 739 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 GNRH1P01148 92 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 SERPINB2P05120 415 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 GNAI3P08754 354 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 MMP10P09238 476 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 TRIM27P14373 513 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 GPTP24298 496 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 RRP1P56182 461 aaKnown RBP7.44□□□□□ -1.22
NUP98-208ENST00000461047 CLN3Q13286 438 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 AAMPQ13685 434 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 HLFQ16534 295 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 INTS3Q68E01 1043 aaKnown RBP7.44□□□□□ -1.22
NUP98-208ENST00000461047 RNF135Q8IUD6 432 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 ZNF34Q8IZ26 560 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 GPR161Q8N6U8 529 aaKnown RBP7.44□□□□□ -1.22
NUP98-208ENST00000461047 CNBD1Q8NA66 436 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 CLUAP1Q96AJ1 413 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 OSBPL3Q9H4L5 887 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 DDX19BQ9UMR2 479 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 DOLKQ9UPQ8 538 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 CICQ96RK0 1608 aaPredicted RBP7.44□□□□□ -1.22
NUP98-208ENST00000461047 CARMIL3Q8ND23 1372 aa7.44□□□□□ -1.22
NUP98-208ENST00000461047 VIRMAQ69YN4 1812 aaKnown RBP7.43□□□□□ -1.22
NUP98-208ENST00000461047 NEURL1BA8MQ27 555 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 ZBTB7AO95365 584 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 UBTFL1P0CB47 393 aaPredicted RBP7.43□□□□□ -1.22
NUP98-208ENST00000461047 TM4SF1P30408 202 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 VAC14Q08AM6 782 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 USP4Q13107 963 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 GCKRQ14397 625 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 NFIXQ14938 502 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 BEND3Q5T5X7 828 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 TBC1D9BQ66K14 1250 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 MSL1Q68DK7 614 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 FOXR1Q6PIV2 292 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 RIPOR1Q6ZS17 1223 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 SMIM5Q71RC9 77 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 NLRP10Q86W26 655 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 ITPRIPQ8IWB1 547 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 ISCA1Q9BUE6 129 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 TMX4Q9H1E5 349 aaPredicted RBP7.43□□□□□ -1.22
NUP98-208ENST00000461047 PPP1R1BQ9UD71 204 aaPredicted RBP7.43□□□□□ -1.22
NUP98-208ENST00000461047 SH3TC1Q8TE82 1336 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 TJP1Q07157 1748 aa7.43□□□□□ -1.22
NUP98-208ENST00000461047 LAMB4A4D0S4 1761 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 FAM177BA6PVY3 158 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 GRM8O00222 908 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 TRAK2O60296 914 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 PCCAP05165 728 aaPredicted RBP7.42□□□□□ -1.22
NUP98-208ENST00000461047 PDE6BP35913 854 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 SEMA3FQ13275 785 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 ZBTB38Q8NAP3 1195 aaPredicted RBP7.42□□□□□ -1.22
NUP98-208ENST00000461047 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
NUP98-208ENST00000461047 RAB6BQ9NRW1 208 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 ADCY9O60503 1353 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 ATP10DQ9P241 1426 aa7.42□□□□□ -1.22
NUP98-208ENST00000461047 H7C1W4 665 aa7.41□□□□□ -1.22
NUP98-208ENST00000461047 PLIN1O60240 522 aa7.41□□□□□ -1.22
NUP98-208ENST00000461047 IGKV5-2P06315 115 aa7.41□□□□□ -1.22
NUP98-208ENST00000461047 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms