RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CARD10Q9BWT7 1032 aa7.05□□□□□ -1.28
ATPAF1-203ENST00000460928 OSGEPQ9NPF4 335 aa7.05□□□□□ -1.28
ATPAF1-203ENST00000460928 SH2B1Q9NRF2 756 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-203ENST00000460928 RRP7BPQ9NSQ0 103 aa7.05□□□□□ -1.28
ATPAF1-203ENST00000460928 PCMTD2Q9NV79 361 aa7.05□□□□□ -1.28
ATPAF1-203ENST00000460928 KANSL3Q9P2N6 904 aa7.05□□□□□ -1.28
ATPAF1-203ENST00000460928 STOML1Q9UBI4 398 aa7.05□□□□□ -1.28
ATPAF1-203ENST00000460928 ZFYVE16Q7Z3T8 1539 aa7.05□□□□□ -1.28
ATPAF1-203ENST00000460928 ZNF518AQ6AHZ1 1483 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 CCDC141Q6ZP82 1450 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 DAPK1P53355 1430 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 ADAM11O75078 769 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 PDGFAP04085 211 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 NOM1Q5C9Z4 860 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 PMEPA1Q969W9 287 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 DZANK1Q9NVP4 752 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 ATP7AQ04656 1500 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 ZMYM4Q5VZL5 1548 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 PLEKHH2Q8IVE3 1493 aa7.04□□□□□ -1.28
ATPAF1-203ENST00000460928 ARHGEF5Q12774 1597 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 INO80Q9ULG1 1556 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 ARHGEF40Q8TER5 1519 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 DNMT1P26358 1616 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 KIAA1324LA8MWY0 1029 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 CES1P23141 567 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 CABP4P57796 275 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 C1orf127Q8N9H9 656 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 UTP4Q969X6 686 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 KLHDC7BQ96G42 594 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 MYRFLQ96LU7 910 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 GGNBP2Q9H3C7 697 aa7.03□□□□□ -1.28
ATPAF1-203ENST00000460928 RRBP1Q9P2E9 1410 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 NPR3P17342 541 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 CDC25BP30305 580 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 DNM1Q05193 864 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 ANKRD34AQ69YU3 496 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 ALKBH2Q6NS38 261 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 CHRDQ9H2X0 955 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 SOX13Q9UN79 622 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 AMOTL2Q9Y2J4 779 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 ATP10AO60312 1499 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 MLH3Q9UHC1 1453 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 CROCC2H7BZ55 1655 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 ADGBQ8N7X0 1667 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 FER1L4A9Z1Z3 1794 aa7.02□□□□□ -1.29
ATPAF1-203ENST00000460928 PTPRTO14522 1441 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 PDE2AO00408 941 aaPredicted RBP7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 DDX3YO15523 660 aaKnown RBP7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 COBLO75128 1261 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 TSPY4P0CV99 314 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 TSPY10P0CW01 314 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 MPSTP25325 297 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 SSTR4P31391 388 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 HSPA1LP34931 641 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 EIF1AXP47813 144 aaKnown RBP7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 NFIAQ12857 509 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 RNF43Q68DV7 783 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 ZDHHC13Q8IUH4 622 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 TMEM102Q8N9M5 508 aaPredicted RBP7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 UBASH3BQ8TF42 649 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 RNF208Q9H0X6 261 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 C7orf69Q9H7B7 122 aa7.01□□□□□ -1.29
ATPAF1-203ENST00000460928 ACPPP15309 386 aa7□□□□□ -1.29
ATPAF1-203ENST00000460928 GGT6Q6P531 493 aa7□□□□□ -1.29
ATPAF1-203ENST00000460928 CLEC10AQ8IUN9 316 aa7□□□□□ -1.29
ATPAF1-203ENST00000460928 TTC16Q8NEE8 873 aa7□□□□□ -1.29
ATPAF1-203ENST00000460928 GTF3C2Q8WUA4 911 aaPredicted RBP7□□□□□ -1.29
ATPAF1-203ENST00000460928 DBNDD2Q9BQY9 259 aa7□□□□□ -1.29
ATPAF1-203ENST00000460928 HIF3AQ9Y2N7 669 aa7□□□□□ -1.29
ATPAF1-203ENST00000460928 A2MP01023 1474 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 KIF15Q9NS87 1388 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 MEGF11A6BM72 1044 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 E9PSI1 815 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 KIF3BO15066 747 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 TGFB1P01137 390 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 CEBPAP49715 358 aaPredicted RBP6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 EHHADHQ08426 723 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 C8orf34Q49A92 452 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 MCTP1Q6DN14 999 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 INTS5Q6P9B9 1019 aaKnown RBP6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 TRIM42Q8IWZ5 723 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 FAM20CQ8IXL6 584 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 FAM83CQ9BQN1 747 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 GOLGA2P5Q9HBQ8 144 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 NCOA1Q15788 1441 aa6.99□□□□□ -1.29
ATPAF1-203ENST00000460928 SETD1AO15047 1707 aaKnown RBP6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 MAGI2Q86UL8 1455 aa6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 A6NHS1 94 aa6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 MED26O95402 600 aa6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 USP5P45974 858 aa6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 PREPP48147 710 aa6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 C19orf57Q0VDD7 668 aa6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 SNX29Q8TEQ0 813 aa6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 BSNDQ8WZ55 320 aa6.98□□□□□ -1.29
ATPAF1-203ENST00000460928 NXPE3Q969Y0 559 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms