RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 FAM105AQ9NUU6 356 aa5.3□□□□□ -1.56
SYPL1-203ENST00000460770 NLRP2Q9NX02 1062 aa5.3□□□□□ -1.56
SYPL1-203ENST00000460770 DAGLAQ9Y4D2 1042 aa5.3□□□□□ -1.56
SYPL1-203ENST00000460770 TMEM238LA0A1B0GVL6 79 aa5.29□□□□□ -1.56
SYPL1-203ENST00000460770 FAM170BA6NMN3 283 aa5.29□□□□□ -1.56
SYPL1-203ENST00000460770 EIF1AYO14602 144 aaKnown RBP5.29□□□□□ -1.56
SYPL1-203ENST00000460770 XRCC5P13010 732 aaKnown RBP5.29□□□□□ -1.56
SYPL1-203ENST00000460770 JUNBP17275 347 aaPredicted RBP5.29□□□□□ -1.56
SYPL1-203ENST00000460770 ADMP35318 185 aa5.29□□□□□ -1.56
SYPL1-203ENST00000460770 ORC1Q13415 861 aa5.29□□□□□ -1.56
SYPL1-203ENST00000460770 USPL1Q5W0Q7 1092 aa5.29□□□□□ -1.56
SYPL1-203ENST00000460770 OGFOD3Q6PK18 319 aa5.29□□□□□ -1.56
SYPL1-203ENST00000460770 MISP3Q96FF7 219 aa5.29□□□□□ -1.56
SYPL1-203ENST00000460770 TRIM56Q9BRZ2 755 aaKnown RBP5.29□□□□□ -1.56
SYPL1-203ENST00000460770 GSX1Q9H4S2 264 aaPredicted RBP5.29□□□□□ -1.56
SYPL1-203ENST00000460770 SLC5A6Q9Y289 635 aa5.29□□□□□ -1.56
SYPL1-203ENST00000460770 CARNS1A5YM72 827 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 BIN1O00499 593 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 DTHD1Q6ZMT9 781 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 ZNF765Q7L2R6 523 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 ALKBH8Q96BT7 664 aaKnown RBP5.28□□□□□ -1.56
SYPL1-203ENST00000460770 WDR18Q9BV38 432 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 ABCB6Q9NP58 842 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 KRT82Q9NSB4 513 aa5.28□□□□□ -1.56
SYPL1-203ENST00000460770 ID3Q02535 119 aa5.27□□□□□ -1.57
SYPL1-203ENST00000460770 GATA6Q92908 595 aa5.27□□□□□ -1.57
SYPL1-203ENST00000460770 CSRNP1Q96S65 589 aa5.27□□□□□ -1.57
SYPL1-203ENST00000460770 RBCK1Q9BYM8 510 aa5.27□□□□□ -1.57
SYPL1-203ENST00000460770 NIF3L1Q9GZT8 377 aa5.27□□□□□ -1.57
SYPL1-203ENST00000460770 TMEM39AQ9NV64 488 aa5.27□□□□□ -1.57
SYPL1-203ENST00000460770 CTSBP07858 339 aa5.26□□□□□ -1.57
SYPL1-203ENST00000460770 GSTP1P09211 210 aaKnown RBP5.26□□□□□ -1.57
SYPL1-203ENST00000460770 ARHGAP27Q6ZUM4 889 aa5.26□□□□□ -1.57
SYPL1-203ENST00000460770 TXNDC2Q86VQ3 553 aa5.26□□□□□ -1.57
SYPL1-203ENST00000460770 ZC3H7BQ9UGR2 993 aaKnown RBP5.26□□□□□ -1.57
SYPL1-203ENST00000460770 GPN3Q9UHW5 284 aaPredicted RBP5.26□□□□□ -1.57
SYPL1-203ENST00000460770 GRM2Q14416 872 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 ECM1Q16610 540 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 KIF4BQ2VIQ3 1234 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 CBLL1Q75N03 491 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 SMYD4Q8IYR2 804 aaPredicted RBP5.25□□□□□ -1.57
SYPL1-203ENST00000460770 EMILIN2Q9BXX0 1053 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 SSU72Q9NP77 194 aaKnown RBP5.25□□□□□ -1.57
SYPL1-203ENST00000460770 C1GALT1Q9NS00 363 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 CRIM1Q9NZV1 1036 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 SAMM50Q9Y512 469 aa5.25□□□□□ -1.57
SYPL1-203ENST00000460770 GPR182O15218 404 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 TMPRSS2O15393 492 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 RNGTTO60942 597 aaKnown RBP5.24□□□□□ -1.57
SYPL1-203ENST00000460770 ECEL1O95672 775 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 LIG1P18858 919 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 FCGRTP55899 365 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 PLCL1Q15111 1095 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 SEZ6L2Q6UXD5 910 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 NETO1Q8TDF5 533 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 CCDC86Q9H6F5 360 aaKnown RBP5.24□□□□□ -1.57
SYPL1-203ENST00000460770 MKNK2Q9HBH9 465 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 PAK6Q9NQU5 681 aaPredicted RBP5.24□□□□□ -1.57
SYPL1-203ENST00000460770 PCOLCE2Q9UKZ9 415 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 PPP1R9AQ9ULJ8 1098 aa5.24□□□□□ -1.57
SYPL1-203ENST00000460770 FAM87AP0C7U9 286 aa5.23□□□□□ -1.57
SYPL1-203ENST00000460770 ITGB5P18084 799 aa5.23□□□□□ -1.57
SYPL1-203ENST00000460770 SHISA5Q8N114 240 aa5.23□□□□□ -1.57
SYPL1-203ENST00000460770 BCL7CQ8WUZ0 217 aaPredicted RBP5.23□□□□□ -1.57
SYPL1-203ENST00000460770 KCNB2Q92953 911 aa5.23□□□□□ -1.57
SYPL1-203ENST00000460770 FANCD2OSQ96PS1 177 aa5.23□□□□□ -1.57
SYPL1-203ENST00000460770 LGR6Q9HBX8 967 aa5.23□□□□□ -1.57
SYPL1-203ENST00000460770 BIN2Q9UBW5 565 aaPredicted RBP5.23□□□□□ -1.57
SYPL1-203ENST00000460770 DCTN4Q9UJW0 460 aa5.23□□□□□ -1.57
SYPL1-203ENST00000460770 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
SYPL1-203ENST00000460770 DYNC1LI2O43237 492 aaPredicted RBP5.22□□□□□ -1.57
SYPL1-203ENST00000460770 ARNTP27540 789 aa5.22□□□□□ -1.57
SYPL1-203ENST00000460770 ZNF157P51786 506 aaPredicted RBP5.22□□□□□ -1.57
SYPL1-203ENST00000460770 IFI16Q16666 785 aaKnown RBP5.22□□□□□ -1.57
SYPL1-203ENST00000460770 SULF2Q8IWU5 870 aa5.22□□□□□ -1.57
SYPL1-203ENST00000460770 EPS8L3Q8TE67 593 aaKnown RBP5.22□□□□□ -1.57
SYPL1-203ENST00000460770 ACSBG1Q96GR2 724 aa5.22□□□□□ -1.57
SYPL1-203ENST00000460770 ZC3H12CQ9C0D7 883 aaKnown RBP5.22□□□□□ -1.57
SYPL1-203ENST00000460770 CEP44Q9C0F1 390 aa5.22□□□□□ -1.57
SYPL1-203ENST00000460770 SRCIN1Q9C0H9 1055 aa5.22□□□□□ -1.57
SYPL1-203ENST00000460770 VAV3Q9UKW4 847 aa5.22□□□□□ -1.57
SYPL1-203ENST00000460770 TMEM265A0A087WTH1 108 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 SOWAHDA6NJG2 315 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 NME2P22392 152 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 ERVK-24P63145 666 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 PLCB3Q01970 1234 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 FAAP100Q0VG06 881 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 CDK5R2Q13319 367 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 TTLL4Q14679 1199 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.21□□□□□ -1.58
SYPL1-203ENST00000460770 POU5F2Q8N7G0 328 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 RETREG2Q8NC44 543 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 GLIS3Q8NEA6 775 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 BCO2Q9BYV7 579 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 PICK1Q9NRD5 415 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 DISC1Q9NRI5 854 aa5.21□□□□□ -1.58
SYPL1-203ENST00000460770 GTF2IRD1Q9UHL9 959 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms