RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 MRPL18Q9H0U6 180 aaKnown RBP7.67□□□□□ -1.18
VBP1-202ENST00000460509 MIR1-1HGQ9H1L0 117 aa7.67□□□□□ -1.18
VBP1-202ENST00000460509 CCDC86Q9H6F5 360 aaKnown RBP7.67□□□□□ -1.18
VBP1-202ENST00000460509 CCSER2Q9H7U1 834 aa7.67□□□□□ -1.18
VBP1-202ENST00000460509 IGHA1P01876 353 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 ITGB2P05107 769 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 TFE3P19532 575 aaPredicted RBP7.66□□□□□ -1.18
VBP1-202ENST00000460509 RPS26P62854 115 aaKnown RBP7.66□□□□□ -1.18
VBP1-202ENST00000460509 CAMK2GQ13555 558 aaPredicted RBP7.66□□□□□ -1.18
VBP1-202ENST00000460509 SEPT6Q14141 434 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 PLA2G4EQ3MJ16 856 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 HP1BP3Q5SSJ5 553 aaPredicted RBP7.66□□□□□ -1.18
VBP1-202ENST00000460509 PDZD3Q86UT5 571 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 ZNF654Q8IZM8 581 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 AGGF1Q8N302 714 aaeCLIP7.66□□□□□ -1.18
VBP1-202ENST00000460509 NRSN2Q9GZP1 204 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 IGSF5Q9NSI5 407 aa7.66□□□□□ -1.18
VBP1-202ENST00000460509 DDX41Q9UJV9 622 aaKnown RBP7.66□□□□□ -1.18
VBP1-202ENST00000460509 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.66□□□□□ -1.18
VBP1-202ENST00000460509 ALX3O95076 343 aa7.65□□□□□ -1.18
VBP1-202ENST00000460509 DLGAP3O95886 979 aa7.65□□□□□ -1.18
VBP1-202ENST00000460509 SELPP16109 830 aa7.65□□□□□ -1.18
VBP1-202ENST00000460509 EIF4A3P38919 411 aaKnown RBP7.65□□□□□ -1.18
VBP1-202ENST00000460509 RACK1P63244 317 aaKnown RBP7.65□□□□□ -1.18
VBP1-202ENST00000460509 HNRNPUQ00839 825 aaKnown RBP eCLIP7.65□□□□□ -1.18
VBP1-202ENST00000460509 EXOSC6Q5RKV6 272 aaKnown RBP7.65□□□□□ -1.18
VBP1-202ENST00000460509 NUTM2GQ5VZR2 741 aa7.65□□□□□ -1.18
VBP1-202ENST00000460509 DIEXFQ68CQ4 756 aaKnown RBP7.65□□□□□ -1.18
VBP1-202ENST00000460509 GOLM1Q8NBJ4 401 aa7.65□□□□□ -1.18
VBP1-202ENST00000460509 GPBAR1Q8TDU6 330 aa7.65□□□□□ -1.18
VBP1-202ENST00000460509 NACC1Q96RE7 527 aa7.65□□□□□ -1.18
VBP1-202ENST00000460509 PCDHA4Q9UN74 947 aa7.65□□□□□ -1.18
VBP1-202ENST00000460509 ZNF252P-AS1Q0IIN9 211 aa7.64□□□□□ -1.19
VBP1-202ENST00000460509 AKAP4Q5JQC9 854 aa7.64□□□□□ -1.19
VBP1-202ENST00000460509 KIAA1211Q6ZU35 1233 aa7.64□□□□□ -1.19
VBP1-202ENST00000460509 WDR89Q96FK6 387 aaPredicted RBP7.64□□□□□ -1.19
VBP1-202ENST00000460509 SPON2Q9BUD6 331 aa7.64□□□□□ -1.19
VBP1-202ENST00000460509 TGIF2Q9GZN2 237 aa7.64□□□□□ -1.19
VBP1-202ENST00000460509 RNF208Q9H0X6 261 aa7.64□□□□□ -1.19
VBP1-202ENST00000460509 ACBD3Q9H3P7 528 aa7.64□□□□□ -1.19
VBP1-202ENST00000460509 C9orf172C9J069 976 aa7.63□□□□□ -1.19
VBP1-202ENST00000460509 TRIM37O94972 964 aa7.63□□□□□ -1.19
VBP1-202ENST00000460509 LMNB2Q03252 620 aa7.63□□□□□ -1.19
VBP1-202ENST00000460509 RAD51AP2Q09MP3 1159 aa7.63□□□□□ -1.19
VBP1-202ENST00000460509 BNC2Q6ZN30 1099 aaPredicted RBP7.63□□□□□ -1.19
VBP1-202ENST00000460509 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.63□□□□□ -1.19
VBP1-202ENST00000460509 C12orf50Q8NA57 414 aaPredicted RBP7.63□□□□□ -1.19
VBP1-202ENST00000460509 ZNF296Q8WUU4 475 aaPredicted RBP7.63□□□□□ -1.19
VBP1-202ENST00000460509 LENG1Q96BZ8 264 aaPredicted RBP7.63□□□□□ -1.19
VBP1-202ENST00000460509 CAPN10Q9HC96 672 aa7.63□□□□□ -1.19
VBP1-202ENST00000460509 ADAMTS1Q9UHI8 967 aa7.63□□□□□ -1.19
VBP1-202ENST00000460509 F8W735 103 aaPredicted RBP7.62□□□□□ -1.19
VBP1-202ENST00000460509 ZNF862O60290 1169 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 AOC2O75106 756 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 SLFN14P0C7P3 912 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 GLB1P16278 677 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 IREB2P48200 963 aaKnown RBP7.62□□□□□ -1.19
VBP1-202ENST00000460509 NRG1Q02297 640 aaPredicted RBP7.62□□□□□ -1.19
VBP1-202ENST00000460509 PTPN11Q06124 597 aaPredicted RBP7.62□□□□□ -1.19
VBP1-202ENST00000460509 FDX2Q6P4F2 183 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 FBXL19Q6PCT2 694 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 KIAA0825Q8IV33 1275 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 TRIM42Q8IWZ5 723 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 RHOVQ96L33 236 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 AKTIPQ9H8T0 292 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 CYP4F12Q9HCS2 524 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 KRT82Q9NSB4 513 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 SUPT16HQ9Y5B9 1047 aaKnown RBP7.62□□□□□ -1.19
VBP1-202ENST00000460509 CSADQ9Y600 493 aa7.62□□□□□ -1.19
VBP1-202ENST00000460509 DCDC2CA8MYV0 355 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 MSTNO14793 375 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 TLR3O15455 904 aaKnown RBP7.61□□□□□ -1.19
VBP1-202ENST00000460509 SART1O43290 800 aaKnown RBP7.61□□□□□ -1.19
VBP1-202ENST00000460509 BPNT1O95861 308 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 F13A1P00488 732 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 TNNI2P48788 182 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.61□□□□□ -1.19
VBP1-202ENST00000460509 ELMO3Q96BJ8 720 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 SPOCK3Q9BQ16 436 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 WDR18Q9BV38 432 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 TMPRSS13Q9BYE2 586 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 PICK1Q9NRD5 415 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 AP4E1Q9UPM8 1137 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 INPP5FQ9Y2H2 1132 aa7.61□□□□□ -1.19
VBP1-202ENST00000460509 DRD2P14416 443 aa7.6□□□□□ -1.19
VBP1-202ENST00000460509 PAK2Q13177 524 aa7.6□□□□□ -1.19
VBP1-202ENST00000460509 ALYREFQ86V81 257 aaKnown RBP7.6□□□□□ -1.19
VBP1-202ENST00000460509 TMEM130Q8N3G9 435 aa7.6□□□□□ -1.19
VBP1-202ENST00000460509 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
VBP1-202ENST00000460509 GAL3ST3Q96A11 431 aa7.6□□□□□ -1.19
VBP1-202ENST00000460509 UBP1Q9NZI7 540 aa7.6□□□□□ -1.19
VBP1-202ENST00000460509 KRBA1A5PL33 1030 aa7.59□□□□□ -1.19
VBP1-202ENST00000460509 MEGF11A6BM72 1044 aa7.59□□□□□ -1.19
VBP1-202ENST00000460509 NOS3P29474 1203 aa7.59□□□□□ -1.19
VBP1-202ENST00000460509 CDK8P49336 464 aa7.59□□□□□ -1.19
VBP1-202ENST00000460509 DYMQ7RTS9 669 aa7.59□□□□□ -1.19
VBP1-202ENST00000460509 FBXO27Q8NI29 283 aa7.59□□□□□ -1.19
VBP1-202ENST00000460509 GATAD2BQ8WXI9 593 aa7.59□□□□□ -1.19
VBP1-202ENST00000460509 PROCP04070 461 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms