RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 NF2P35240 595 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 TIMM10P62072 90 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 HDLBPQ00341 1268 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 CFAP100Q494V2 611 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 TNNI3KQ59H18 835 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 DOCK2Q92608 1830 aa12.71□□□□□ -0.38
HLA-DQB1-207ENST00000460185 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ADM5C9JUS6 153 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 TRAF5O00463 557 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CELF2O95319 508 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 LDHBP07195 334 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 TNFAIP1Q13829 316 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 SPTY2D1Q68D10 685 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 USP48Q86UV5 1035 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 TMOD2Q9NZR1 351 aa12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 MYO5AQ9Y4I1 1855 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-207ENST00000460185 MYH7P12883 1935 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ARID4AP29374 1257 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CRKP46108 304 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 AAMPQ13685 434 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 RASGRF1Q13972 1273 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CLASRPQ8N2M8 674 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 KLRG1Q96E93 195 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 HS3ST6Q96QI5 342 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CNTNAP1P78357 1384 aa12.69□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 TNNI2P48788 182 aa12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 HTRA3P83110 453 aa12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 DZIP1Q86YF9 867 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 C2orf69Q8N8R5 385 aa12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ZBED3Q96IU2 234 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ABCF2Q9UG63 623 aa12.68□□□□□ -0.38
HLA-DQB1-207ENST00000460185 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ECE1P42892 770 aa12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 FKBP1BP68106 108 aa12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 HHIPL2Q6UWX4 724 aa12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 AACSQ86V21 672 aa12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 MRIQ9BWK5 157 aa12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 TLL2Q9Y6L7 1015 aa12.67□□□□□ -0.38
HLA-DQB1-207ENST00000460185 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 APBB1O00213 710 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 IGSF3O75054 1194 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 IFIT2P09913 472 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 HOXB1P14653 301 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 PRDX5P30044 214 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ERICH6Q7L0X2 663 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 PRMT6Q96LA8 375 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 ZDHHC15Q96MV8 337 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 DBNDD2Q9BQY9 259 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 LRRCC1Q9C099 1032 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 MKRN1Q9UHC7 482 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 OTOFQ9HC10 1997 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 FOCADQ5VW36 1801 aa12.66□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CDK5RAP2Q96SN8 1893 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 GSTO1P78417 241 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 FMR1Q06787 632 aaKnown RBP eCLIP12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 DEFB115Q30KQ5 88 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CST9Q5W186 159 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 SAPCD2Q86UD0 394 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 CRBNQ96SW2 442 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 IL1RAPL2Q9NP60 686 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 HMG20BQ9P0W2 317 aa12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-207ENST00000460185 MCAMP43121 646 aa12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 HUNKP57058 714 aa12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 GRIK5Q16478 980 aa12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 TDRD3Q9H7E2 651 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
HLA-DQB1-207ENST00000460185 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms