RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 AK2P54819 239 aa12.22□□□□□ -0.45
HERC4-207ENST00000460168 IMMTQ16891 758 aaKnown RBP12.22□□□□□ -0.45
HERC4-207ENST00000460168 C2CD5Q86YS7 1000 aa12.22□□□□□ -0.45
HERC4-207ENST00000460168 MPNDQ8N594 471 aa12.22□□□□□ -0.45
HERC4-207ENST00000460168 LRRC37AA6NMS7 1700 aa12.22□□□□□ -0.45
HERC4-207ENST00000460168 MBD4O95243 580 aa12.21□□□□□ -0.45
HERC4-207ENST00000460168 FGAP02671 866 aa12.21□□□□□ -0.45
HERC4-207ENST00000460168 CYP7A1P22680 504 aa12.21□□□□□ -0.45
HERC4-207ENST00000460168 TBC1D16Q8TBP0 767 aa12.21□□□□□ -0.45
HERC4-207ENST00000460168 NEK1Q96PY6 1258 aa12.21□□□□□ -0.45
HERC4-207ENST00000460168 CHMP5Q9NZZ3 219 aa12.21□□□□□ -0.45
HERC4-207ENST00000460168 JAG2Q9Y219 1238 aa12.21□□□□□ -0.45
HERC4-207ENST00000460168 FOXP2O15409 715 aa12.21□□□□□ -0.46
HERC4-207ENST00000460168 TTLL5Q6EMB2 1281 aa12.21□□□□□ -0.46
HERC4-207ENST00000460168 NAA16Q6N069 864 aaPredicted RBP12.21□□□□□ -0.46
HERC4-207ENST00000460168 C15orf52Q6ZUT6 534 aaKnown RBP12.21□□□□□ -0.46
HERC4-207ENST00000460168 MIGA1Q8NAN2 632 aa12.21□□□□□ -0.46
HERC4-207ENST00000460168 TSPYL1Q9H0U9 437 aa12.21□□□□□ -0.46
HERC4-207ENST00000460168 EFCC1Q9HA90 598 aa12.21□□□□□ -0.46
HERC4-207ENST00000460168 CGNQ9P2M7 1197 aaKnown RBP12.21□□□□□ -0.46
HERC4-207ENST00000460168 POLLQ9UGP5 575 aa12.21□□□□□ -0.46
HERC4-207ENST00000460168 CACNA1SQ13698 1873 aa12.2□□□□□ -0.46
HERC4-207ENST00000460168 ZGPATQ8N5A5 531 aaKnown RBP12.2□□□□□ -0.46
HERC4-207ENST00000460168 STRBPQ96SI9 672 aaKnown RBP12.2□□□□□ -0.46
HERC4-207ENST00000460168 ARMT1Q9H993 441 aa12.2□□□□□ -0.46
HERC4-207ENST00000460168 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 HAND2P61296 217 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 TDRD7Q8NHU6 1098 aaKnown RBP12.19□□□□□ -0.46
HERC4-207ENST00000460168 WDR66Q8TBY9 1149 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
HERC4-207ENST00000460168 FAM13BQ9NYF5 915 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 LIMCH1Q9UPQ0 1083 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 A0A0G2JLW4 131 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 ZNF213O14771 459 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 PRDX5P30044 214 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 CHRNA5P30532 468 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 OLFM4Q6UX06 510 aa12.19□□□□□ -0.46
HERC4-207ENST00000460168 DPP8Q6V1X1 898 aaPredicted RBP12.19□□□□□ -0.46
HERC4-207ENST00000460168 E7EWF7 191 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 GNAT2P19087 354 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 MECOMQ03112 1051 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
HERC4-207ENST00000460168 ANKRD1Q15327 319 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 SPTY2D1Q68D10 685 aaPredicted RBP12.18□□□□□ -0.46
HERC4-207ENST00000460168 STYK1Q6J9G0 422 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 STOX1Q6ZVD7 989 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 ADGRA1Q86SQ6 560 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
HERC4-207ENST00000460168 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
HERC4-207ENST00000460168 LCORLQ8N3X6 602 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 CD209Q9NNX6 404 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
HERC4-207ENST00000460168 LTBP1Q14766 1721 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 MAGEB6P1A0A0J9YX57 407 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 DDIT3P35638 169 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 NSUN4Q96CB9 384 aaKnown RBP12.18□□□□□ -0.46
HERC4-207ENST00000460168 NAPBQ9H115 298 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 CEP83Q9Y592 693 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 SLC4A4Q9Y6R1 1079 aa12.18□□□□□ -0.46
HERC4-207ENST00000460168 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 LDHBP07195 334 aaKnown RBP12.17□□□□□ -0.46
HERC4-207ENST00000460168 CUL4AQ13619 759 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 NACAP1Q9BZK3 213 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 ZC3H12CQ9C0D7 883 aaKnown RBP12.17□□□□□ -0.46
HERC4-207ENST00000460168 IL1R1P14778 569 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 TDO2P48775 406 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 CCDC96Q2M329 555 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 IFNL3Q8IZI9 196 aa12.17□□□□□ -0.46
HERC4-207ENST00000460168 INTS4Q96HW7 963 aaKnown RBP12.17□□□□□ -0.46
HERC4-207ENST00000460168 SALL1Q9NSC2 1324 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 LOC102724159A0A0B4J2E5 919 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 PRKAB2O43741 272 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 OFD1O75665 1012 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 PWP2Q15269 919 aaKnown RBP12.16□□□□□ -0.46
HERC4-207ENST00000460168 EP400NLQ6ZTU2 488 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 DHX32Q7L7V1 743 aaKnown RBP12.16□□□□□ -0.46
HERC4-207ENST00000460168 RALYLQ86SE5 291 aaKnown RBP12.16□□□□□ -0.46
HERC4-207ENST00000460168 FAM177A1Q8N128 213 aaPredicted RBP12.16□□□□□ -0.46
HERC4-207ENST00000460168 RNF217Q8TC41 542 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 ZNF384Q8TF68 577 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
HERC4-207ENST00000460168 EPB41L4AQ9HCS5 686 aaPredicted RBP12.16□□□□□ -0.46
HERC4-207ENST00000460168 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
HERC4-207ENST00000460168 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
HERC4-207ENST00000460168 MAST2Q6P0Q8 1798 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 ZMYM6O95789 1325 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
HERC4-207ENST00000460168 GSG1L2A8MUP6 293 aa12.15□□□□□ -0.46
HERC4-207ENST00000460168 G3V3G9 751 aa12.15□□□□□ -0.46
HERC4-207ENST00000460168 TRDNQ13061 729 aa12.15□□□□□ -0.46
HERC4-207ENST00000460168 ALX1Q15699 326 aa12.15□□□□□ -0.46
HERC4-207ENST00000460168 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
HERC4-207ENST00000460168 TSHZ1Q6ZSZ6 1077 aa12.15□□□□□ -0.46
HERC4-207ENST00000460168 SDR42E1Q8WUS8 393 aa12.15□□□□□ -0.46
HERC4-207ENST00000460168 RIOK1Q9BRS2 568 aaKnown RBP12.15□□□□□ -0.46
HERC4-207ENST00000460168 ALDH8A1Q9H2A2 487 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms