RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 LIG1P18858 919 aa5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 ST13P50502 369 aaKnown RBP5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 LRRC14Q15048 493 aa5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 TAF1CQ15572 869 aaPredicted RBP5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 STK35Q8TDR2 534 aa5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 MYRFLQ96LU7 910 aa5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 ZC3H12CQ9C0D7 883 aaKnown RBP5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 SEMA6BQ9H3T3 888 aa5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 CCDC86Q9H6F5 360 aaKnown RBP5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 CBX8Q9HC52 389 aa5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 VTI1BQ9UEU0 232 aa5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 RAXQ9Y2V3 346 aa5.24□□□□□ -1.57
SCARNA18-201ENST00000459004 ZNF862O60290 1169 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 CELA3AP09093 270 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 BMP3P12645 472 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 DRD2P14416 443 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 ZNF252P-AS1Q0IIN9 211 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 CCDC85BQ15834 202 aaPredicted RBP5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 AKAP4Q5JQC9 854 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 MEI1Q5TIA1 1274 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 SCARA3Q6AZY7 606 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 FAM20CQ8IXL6 584 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 CRELD1Q96HD1 420 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 WDR18Q9BV38 432 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 CYP8B1Q9UNU6 501 aa5.23□□□□□ -1.57
SCARNA18-201ENST00000459004 RBM47A0AV96 593 aaKnown RBP5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 ADAM23O75077 832 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 TRIM37O94972 964 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 ADH5P11766 374 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 USP11P51784 963 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 KIF4BQ2VIQ3 1234 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 PCNX4Q63HM2 1172 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 MAP1SQ66K74 1059 aaPredicted RBP5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 TTBK2Q6IQ55 1244 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 LLGL2Q6P1M3 1020 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 DYMQ7RTS9 669 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 CLEC10AQ8IUN9 316 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 C2CD4AQ8NCU7 369 aaPredicted RBP5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 GRIN3AQ8TCU5 1115 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 WDR89Q96FK6 387 aaPredicted RBP5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 NOC4LQ9BVI4 516 aaKnown RBP5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 CACNA2D2Q9NY47 1150 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 STOML1Q9UBI4 398 aa5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 CCDC9Q9Y3X0 531 aaKnown RBP5.22□□□□□ -1.57
SCARNA18-201ENST00000459004 TMPRSS2O15393 492 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 RLBP1P12271 317 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 RPS26P62854 115 aaKnown RBP5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 MRPL58Q14197 206 aaKnown RBP5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 SGO2Q562F6 1265 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 SLC51AQ86UW1 340 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 RGS22Q8NE09 1264 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 GPBAR1Q8TDU6 330 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 FAM83CQ9BQN1 747 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 YIPF2Q9BWQ6 316 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 KCNF1Q9H3M0 494 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 GSX1Q9H4S2 264 aaPredicted RBP5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 PPP1R9AQ9ULJ8 1098 aa5.21□□□□□ -1.58
SCARNA18-201ENST00000459004 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 GSC2O15499 205 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 MAP4P27816 1152 aaKnown RBP5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 RXRBP28702 533 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 ASPAP45381 313 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 ID3Q02535 119 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 RASIP1Q5U651 963 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 CDPF1Q6NVV7 123 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 BEND4Q6ZU67 534 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 ACSBG1Q96GR2 724 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 ATXN3LQ9H3M9 355 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 CRIM1Q9NZV1 1036 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 AP4E1Q9UPM8 1137 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 PCDHGC5Q9Y5F6 944 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 ACTL7BQ9Y614 415 aa5.2□□□□□ -1.58
SCARNA18-201ENST00000459004 LMNB1P20700 586 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 LIG3P49916 1009 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 ZC3H12AQ5D1E8 599 aaKnown RBP5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 PRSS36Q5K4E3 855 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 MPRIPQ6WCQ1 1025 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 AGMOQ6ZNB7 445 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 TRIM42Q8IWZ5 723 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 FBLIM1Q8WUP2 373 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 EZH1Q92800 747 aaPredicted RBP5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 FANCD2OSQ96PS1 177 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 C7orf69Q9H7B7 122 aa5.19□□□□□ -1.58
SCARNA18-201ENST00000459004 FAM95CA0A1B0GW59 222 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 HMX2A2RU54 273 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 IGLV1-40P01703 118 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 FSTP19883 344 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 ERVK-24P63145 666 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 MAP7Q14244 749 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 NFKBIBQ15653 356 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 MAP3K11Q16584 847 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 RNF43Q68DV7 783 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 PAOXQ6QHF9 649 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 RELL1Q8IUW5 271 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 RSRP1Q9BUV0 290 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 ACSS3Q9H6R3 686 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 DISC1Q9NRI5 854 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 FAM105AQ9NUU6 356 aa5.18□□□□□ -1.58
SCARNA18-201ENST00000459004 PCDHA4Q9UN74 947 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms