RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CEP85LQ5SZL2 805 aa22.07■■□□□ 1.12
SNX27-204ENST00000458013 DDX12PQ92771 950 aa22.07■■□□□ 1.12
SNX27-204ENST00000458013 PTPROQ16827 1216 aa22.07■■□□□ 1.12
SNX27-204ENST00000458013 USH1GQ495M9 461 aa22.07■■□□□ 1.12
SNX27-204ENST00000458013 TFCP2L1Q9NZI6 479 aa22.07■■□□□ 1.12
SNX27-204ENST00000458013 SV2BQ7L1I2 683 aa22.07■■□□□ 1.12
SNX27-204ENST00000458013 E7EVH7 732 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 CHMLP26374 656 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 CLCN1P35523 988 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 TIMM10P62072 90 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 C14orf93Q9H972 538 aaKnown RBP22.06■■□□□ 1.12
SNX27-204ENST00000458013 ZNF408Q9H9D4 720 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 FRMD4BQ9Y2L6 1034 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 PRDM1O75626 825 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 TXKP42681 527 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 GNAQP50148 359 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 NCAPH2Q6IBW4 605 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 G2E3Q7L622 706 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 PFDN4Q9NQP4 134 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 MYCLP12524 364 aaPredicted RBP22.06■■□□□ 1.12
SNX27-204ENST00000458013 DYMQ7RTS9 669 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 KIFC2Q96AC6 838 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 SPOPO43791 374 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 CFAP57Q96MR6 1250 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 CAVIN2O95810 425 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 IGSF22Q8N9C0 903 aa22.06■■□□□ 1.12
SNX27-204ENST00000458013 CCDC94Q9BW85 323 aaPredicted RBP22.06■■□□□ 1.12
SNX27-204ENST00000458013 TAF5LO75529 589 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 PSMD6Q15008 389 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 EBAG9O00559 213 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 FAM89AQ96GI7 184 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 BLZF1Q9H2G9 400 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 ASXL1Q8IXJ9 1541 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 IL16Q14005 1332 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 NCBP1Q09161 790 aaKnown RBP22.05■■□□□ 1.12
SNX27-204ENST00000458013 HSPA1LP34931 641 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 HS2ST1Q7LGA3 356 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 KLHL7Q8IXQ5 586 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 STAMQ92783 540 aa22.05■■□□□ 1.12
SNX27-204ENST00000458013 EPB41P11171 864 aaKnown RBP22.04■■□□□ 1.12
SNX27-204ENST00000458013 DHX32Q7L7V1 743 aaKnown RBP22.04■■□□□ 1.12
SNX27-204ENST00000458013 POLR2DO15514 142 aaKnown RBP22.04■■□□□ 1.12
SNX27-204ENST00000458013 USP26Q9BXU7 913 aa22.04■■□□□ 1.12
SNX27-204ENST00000458013 CEP83Q9Y592 693 aa22.04■■□□□ 1.12
SNX27-204ENST00000458013 PARP3Q9Y6F1 533 aa22.04■■□□□ 1.12
SNX27-204ENST00000458013 TNFAIP3P21580 790 aa22.04■■□□□ 1.12
SNX27-204ENST00000458013 SNX16P57768 344 aa22.04■■□□□ 1.12
SNX27-204ENST00000458013 PHACTR3Q96KR7 559 aa22.04■■□□□ 1.12
SNX27-204ENST00000458013 FAM227BQ96M60 508 aa22.04■■□□□ 1.12
SNX27-204ENST00000458013 GDAP1L1Q96MZ0 367 aa22.04■■□□□ 1.12
SNX27-204ENST00000458013 PHKBQ93100 1093 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 TSGA10Q9BZW7 698 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 ZC3H12CQ9C0D7 883 aaKnown RBP22.03■■□□□ 1.12
SNX27-204ENST00000458013 MTRF1LQ9UGC7 380 aaKnown RBP22.03■■□□□ 1.12
SNX27-204ENST00000458013 NSD2O96028 1365 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
SNX27-204ENST00000458013 INTS8Q75QN2 995 aaKnown RBP22.03■■□□□ 1.12
SNX27-204ENST00000458013 TTC14Q96N46 770 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 FNBP1Q96RU3 617 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 SLC27A2O14975 620 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 ASIC2Q16515 512 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 HDXQ7Z353 690 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 RPUSD2Q8IZ73 545 aaKnown RBP22.03■■□□□ 1.12
SNX27-204ENST00000458013 AATFQ9NY61 560 aaKnown RBP eCLIP22.03■■□□□ 1.12
SNX27-204ENST00000458013 JAKMIP2Q96AA8 810 aa22.03■■□□□ 1.12
SNX27-204ENST00000458013 VAV2P52735 878 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 DDB1Q16531 1140 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 HAUS7Q99871 368 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 CALML3P27482 149 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 CALCOCO2Q13137 446 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 SETDB1Q15047 1291 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 SNX21Q969T3 373 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 ATP2A2P16615 1042 aaKnown RBP22.02■■□□□ 1.12
SNX27-204ENST00000458013 RPS6KB1P23443 525 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 TNNC1P63316 161 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 NELFCDQ8IXH7 590 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 MGARPQ8TDB4 240 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
SNX27-204ENST00000458013 ELP1O95163 1332 aa22.02■■□□□ 1.12
SNX27-204ENST00000458013 BIN2Q9UBW5 565 aaPredicted RBP22.02■■□□□ 1.11
SNX27-204ENST00000458013 ZNF131P52739 623 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 LRMPQ12912 555 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 FMNL3Q8IVF7 1028 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 NOL3O60936 208 aaKnown RBP22.01■■□□□ 1.11
SNX27-204ENST00000458013 MYO1AQ9UBC5 1043 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 WDR44Q5JSH3 913 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 CMTR1Q8N1G2 835 aaKnown RBP22.01■■□□□ 1.11
SNX27-204ENST00000458013 GNAT2P19087 354 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 ELF2Q15723 593 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 TAB2Q9NYJ8 693 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 V9GY48 417 aaPredicted RBP22.01■■□□□ 1.11
SNX27-204ENST00000458013 GABPAQ06546 454 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 EPSTI1Q96J88 318 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 TTLL3Q9Y4R7 772 aa22.01■■□□□ 1.11
SNX27-204ENST00000458013 TCP10Q12799 353 aa22■■□□□ 1.11
SNX27-204ENST00000458013 AFAP1L1Q8TED9 768 aa22■■□□□ 1.11
SNX27-204ENST00000458013 CARD6Q9BX69 1037 aa22■■□□□ 1.11
SNX27-204ENST00000458013 SYNRGQ9UMZ2 1314 aa22■■□□□ 1.11
SNX27-204ENST00000458013 ALDH1L1O75891 902 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms