RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 ZNF211Q13398 564 aaPredicted RBP6.65□□□□□ -1.34
LINC01546-201ENST00000457435 ZNF792Q3KQV3 632 aa6.65□□□□□ -1.34
LINC01546-201ENST00000457435 SPRED2Q7Z698 418 aa6.65□□□□□ -1.34
LINC01546-201ENST00000457435 TRIM56Q9BRZ2 755 aaKnown RBP6.65□□□□□ -1.34
LINC01546-201ENST00000457435 EHD4Q9H223 541 aa6.65□□□□□ -1.34
LINC01546-201ENST00000457435 PAPLNO95428 1278 aa6.64□□□□□ -1.35
LINC01546-201ENST00000457435 USPL1Q5W0Q7 1092 aa6.64□□□□□ -1.35
LINC01546-201ENST00000457435 SEZ6L2Q6UXD5 910 aa6.64□□□□□ -1.35
LINC01546-201ENST00000457435 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
LINC01546-201ENST00000457435 PIDD1Q9HB75 910 aa6.64□□□□□ -1.35
LINC01546-201ENST00000457435 NEFLP07196 543 aa6.63□□□□□ -1.35
LINC01546-201ENST00000457435 LIG1P18858 919 aa6.63□□□□□ -1.35
LINC01546-201ENST00000457435 ZNF124Q15973 351 aa6.63□□□□□ -1.35
LINC01546-201ENST00000457435 ECM1Q16610 540 aa6.63□□□□□ -1.35
LINC01546-201ENST00000457435 ZC3H12CQ9C0D7 883 aaKnown RBP6.63□□□□□ -1.35
LINC01546-201ENST00000457435 BRPF3Q9ULD4 1205 aa6.63□□□□□ -1.35
LINC01546-201ENST00000457435 PPP1R9AQ9ULJ8 1098 aa6.63□□□□□ -1.35
LINC01546-201ENST00000457435 B3GALT4O96024 378 aa6.62□□□□□ -1.35
LINC01546-201ENST00000457435 FAM87AP0C7U9 286 aa6.62□□□□□ -1.35
LINC01546-201ENST00000457435 PDIA4P13667 645 aaKnown RBP6.62□□□□□ -1.35
LINC01546-201ENST00000457435 CDK5R2Q13319 367 aa6.62□□□□□ -1.35
LINC01546-201ENST00000457435 ARHGAP27Q6ZUM4 889 aa6.62□□□□□ -1.35
LINC01546-201ENST00000457435 FAM181AQ8N9Y4 354 aa6.62□□□□□ -1.35
LINC01546-201ENST00000457435 WDR18Q9BV38 432 aa6.62□□□□□ -1.35
LINC01546-201ENST00000457435 GSX1Q9H4S2 264 aaPredicted RBP6.62□□□□□ -1.35
LINC01546-201ENST00000457435 RC3H2Q9HBD1 1191 aaKnown RBP6.62□□□□□ -1.35
LINC01546-201ENST00000457435 RNGTTO60942 597 aaKnown RBP6.61□□□□□ -1.35
LINC01546-201ENST00000457435 SLFN14P0C7P3 912 aa6.61□□□□□ -1.35
LINC01546-201ENST00000457435 ZNF157P51786 506 aaPredicted RBP6.61□□□□□ -1.35
LINC01546-201ENST00000457435 AP3B2Q13367 1082 aa6.61□□□□□ -1.35
LINC01546-201ENST00000457435 KIAA0319Q5VV43 1072 aa6.61□□□□□ -1.35
LINC01546-201ENST00000457435 PLD6Q8N2A8 252 aaKnown RBP6.61□□□□□ -1.35
LINC01546-201ENST00000457435 NETO1Q8TDF5 533 aa6.61□□□□□ -1.35
LINC01546-201ENST00000457435 MISP3Q96FF7 219 aa6.61□□□□□ -1.35
LINC01546-201ENST00000457435 ZNF576Q9H609 170 aa6.61□□□□□ -1.35
LINC01546-201ENST00000457435 FARP2O94887 1054 aaPredicted RBP6.6□□□□□ -1.35
LINC01546-201ENST00000457435 CD8BP10966 210 aa6.6□□□□□ -1.35
LINC01546-201ENST00000457435 PKN1Q16512 942 aa6.6□□□□□ -1.35
LINC01546-201ENST00000457435 PI4K2BQ8TCG2 481 aa6.6□□□□□ -1.35
LINC01546-201ENST00000457435 CARMIL2Q6F5E8 1435 aa6.59□□□□□ -1.35
LINC01546-201ENST00000457435 PPP1R15AO75807 674 aaPredicted RBP6.59□□□□□ -1.35
LINC01546-201ENST00000457435 ATG4DQ86TL0 474 aaPredicted RBP6.59□□□□□ -1.35
LINC01546-201ENST00000457435 FAM168AQ92567 244 aa6.59□□□□□ -1.35
LINC01546-201ENST00000457435 WDR89Q96FK6 387 aaPredicted RBP6.59□□□□□ -1.35
LINC01546-201ENST00000457435 ATXN3LQ9H3M9 355 aa6.59□□□□□ -1.35
LINC01546-201ENST00000457435 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
LINC01546-201ENST00000457435 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
LINC01546-201ENST00000457435 TMPRSS2O15393 492 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
LINC01546-201ENST00000457435 GADD45BO75293 160 aaPredicted RBP6.58□□□□□ -1.36
LINC01546-201ENST00000457435 FUT4P22083 530 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 ITPKAP23677 461 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 CD96P40200 585 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 ID3Q02535 119 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 ORC1Q13415 861 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 KSR1Q8IVT5 923 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 SMYD4Q8IYR2 804 aaPredicted RBP6.58□□□□□ -1.36
LINC01546-201ENST00000457435 FANCD2OSQ96PS1 177 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 SSU72Q9NP77 194 aaKnown RBP6.58□□□□□ -1.36
LINC01546-201ENST00000457435 NPHS2Q9NP85 383 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 CRIM1Q9NZV1 1036 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 VAV3Q9UKW4 847 aa6.58□□□□□ -1.36
LINC01546-201ENST00000457435 SYNGAP1Q96PV0 1343 aa6.57□□□□□ -1.36
LINC01546-201ENST00000457435 DBX1A6NMT0 343 aa6.57□□□□□ -1.36
LINC01546-201ENST00000457435 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
LINC01546-201ENST00000457435 HNRNPUQ00839 825 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC01546-201ENST00000457435 AOC3Q16853 763 aa6.57□□□□□ -1.36
LINC01546-201ENST00000457435 WFDC3Q8IUB2 231 aa6.57□□□□□ -1.36
LINC01546-201ENST00000457435 GLYCTKQ8IVS8 523 aa6.57□□□□□ -1.36
LINC01546-201ENST00000457435 TMC1Q8TDI8 760 aa6.57□□□□□ -1.36
LINC01546-201ENST00000457435 MBNL3Q9NUK0 354 aaKnown RBP6.57□□□□□ -1.36
LINC01546-201ENST00000457435 NDUFB5O43674 189 aa6.56□□□□□ -1.36
LINC01546-201ENST00000457435 ICMTO60725 284 aa6.56□□□□□ -1.36
LINC01546-201ENST00000457435 HCLS1P14317 486 aaPredicted RBP6.56□□□□□ -1.36
LINC01546-201ENST00000457435 PRKCQQ04759 706 aa6.56□□□□□ -1.36
LINC01546-201ENST00000457435 PDE3BQ13370 1112 aa6.56□□□□□ -1.36
LINC01546-201ENST00000457435 GLIS3Q8NEA6 775 aa6.56□□□□□ -1.36
LINC01546-201ENST00000457435 SLC38A3Q99624 504 aa6.56□□□□□ -1.36
LINC01546-201ENST00000457435 DISC1Q9NRI5 854 aa6.56□□□□□ -1.36
LINC01546-201ENST00000457435 TMEM238LA0A1B0GVL6 79 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 H3BRB1 525 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 LEFTY1O75610 366 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 PTPN12Q05209 780 aaKnown RBP6.55□□□□□ -1.36
LINC01546-201ENST00000457435 PDE4CQ08493 712 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 TTLL4Q14679 1199 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 IFI16Q16666 785 aaKnown RBP6.55□□□□□ -1.36
LINC01546-201ENST00000457435 RPS26P11Q5JNZ5 115 aaPredicted RBP6.55□□□□□ -1.36
LINC01546-201ENST00000457435 LRRN4CLQ8ND94 238 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 TMEM40Q8WWA1 233 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 KCNB2Q92953 911 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 HRASLS5Q96KN8 279 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 TUT1Q9H6E5 874 aaKnown RBP6.55□□□□□ -1.36
LINC01546-201ENST00000457435 ADAMTS6Q9UKP5 1117 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 PCOLCE2Q9UKZ9 415 aa6.55□□□□□ -1.36
LINC01546-201ENST00000457435 TMEM265A0A087WTH1 108 aa6.54□□□□□ -1.36
LINC01546-201ENST00000457435 ZNF862O60290 1169 aa6.54□□□□□ -1.36
LINC01546-201ENST00000457435 IGHA2P01877 340 aa6.54□□□□□ -1.36
LINC01546-201ENST00000457435 ITIH2P19823 946 aa6.54□□□□□ -1.36
LINC01546-201ENST00000457435 CCDC74AQ96AQ1 378 aa6.54□□□□□ -1.36
LINC01546-201ENST00000457435 ABCB6Q9NP58 842 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms