RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
SF3B4-202ENST00000457312 TRIM32Q13049 653 aa20.99■□□□□ 0.95
SF3B4-202ENST00000457312 UHRF1Q96T88 793 aaPredicted RBP20.99■□□□□ 0.95
SF3B4-202ENST00000457312 LBHD1Q9BQE6 289 aaPredicted RBP20.99■□□□□ 0.95
SF3B4-202ENST00000457312 C1QTNF1Q9BXJ1 281 aa20.99■□□□□ 0.95
SF3B4-202ENST00000457312 MYO9BQ13459 2157 aa20.98■□□□□ 0.95
SF3B4-202ENST00000457312 IL1R1P14778 569 aa20.98■□□□□ 0.95
SF3B4-202ENST00000457312 SMAD3P84022 425 aaKnown RBP20.98■□□□□ 0.95
SF3B4-202ENST00000457312 DZIP1LQ8IYY4 767 aaKnown RBP20.98■□□□□ 0.95
SF3B4-202ENST00000457312 MYD88Q99836 296 aa20.98■□□□□ 0.95
SF3B4-202ENST00000457312 ANKRD2Q9GZV1 360 aa20.98■□□□□ 0.95
SF3B4-202ENST00000457312 HMX1Q9NP08 348 aaPredicted RBP20.98■□□□□ 0.95
SF3B4-202ENST00000457312 DBF4Q9UBU7 674 aaPredicted RBP20.98■□□□□ 0.95
SF3B4-202ENST00000457312 SERPINA10Q9UK55 444 aa20.98■□□□□ 0.95
SF3B4-202ENST00000457312 PLXNB2O15031 1838 aa20.98■□□□□ 0.95
SF3B4-202ENST00000457312 INPP5BP32019 993 aa20.97■□□□□ 0.95
SF3B4-202ENST00000457312 KCNJ4P48050 445 aa20.97■□□□□ 0.95
SF3B4-202ENST00000457312 ATXN2LQ8WWM7 1075 aaKnown RBP20.97■□□□□ 0.95
SF3B4-202ENST00000457312 CWC25Q9NXE8 425 aaPredicted RBP20.97■□□□□ 0.95
SF3B4-202ENST00000457312 TCF20Q9UGU0 1960 aaKnown RBP20.96■□□□□ 0.95
SF3B4-202ENST00000457312 SNAP23O00161 211 aa20.96■□□□□ 0.95
SF3B4-202ENST00000457312 SHHQ15465 462 aa20.96■□□□□ 0.95
SF3B4-202ENST00000457312 C9orf50Q5SZB4 431 aa20.96■□□□□ 0.95
SF3B4-202ENST00000457312 RIC3Q7Z5B4 369 aa20.96■□□□□ 0.95
SF3B4-202ENST00000457312 ASB2Q96Q27 587 aa20.96■□□□□ 0.95
SF3B4-202ENST00000457312 IGHMBP2P38935 993 aaKnown RBP20.95■□□□□ 0.94
SF3B4-202ENST00000457312 C15orf52Q6ZUT6 534 aaKnown RBP20.95■□□□□ 0.94
SF3B4-202ENST00000457312 ALYREFQ86V81 257 aaKnown RBP20.95■□□□□ 0.94
SF3B4-202ENST00000457312 COA7Q96BR5 231 aa20.95■□□□□ 0.94
SF3B4-202ENST00000457312 HYPKQ9NX55 129 aa20.95■□□□□ 0.94
SF3B4-202ENST00000457312 CACNB3P54284 484 aa20.94■□□□□ 0.94
SF3B4-202ENST00000457312 TTF2Q9UNY4 1162 aaKnown RBP20.94■□□□□ 0.94
SF3B4-202ENST00000457312 PPP2R1AP30153 589 aa20.93■□□□□ 0.94
SF3B4-202ENST00000457312 GOLGA2Q08379 1002 aa20.93■□□□□ 0.94
SF3B4-202ENST00000457312 THEGQ9P2T0 379 aa20.93■□□□□ 0.94
SF3B4-202ENST00000457312 RPAP1Q9BWH6 1393 aaPredicted RBP20.93■□□□□ 0.94
SF3B4-202ENST00000457312 CHRNDQ07001 517 aa20.92■□□□□ 0.94
SF3B4-202ENST00000457312 ZNF804AQ7Z570 1209 aa20.92■□□□□ 0.94
SF3B4-202ENST00000457312 ZNF341Q9BYN7 854 aa20.92■□□□□ 0.94
SF3B4-202ENST00000457312 CRKP46108 304 aa20.91■□□□□ 0.94
SF3B4-202ENST00000457312 DCAF15Q66K64 600 aa20.91■□□□□ 0.94
SF3B4-202ENST00000457312 LRFN3Q9BTN0 628 aa20.91■□□□□ 0.94
SF3B4-202ENST00000457312 HOXB7P09629 217 aa20.9■□□□□ 0.94
SF3B4-202ENST00000457312 GRIN2CQ14957 1233 aa20.9■□□□□ 0.94
SF3B4-202ENST00000457312 MFSD14BQ5SR56 506 aa20.9■□□□□ 0.94
SF3B4-202ENST00000457312 MAP3K21Q5TCX8 1036 aa20.9■□□□□ 0.94
SF3B4-202ENST00000457312 HOOK2Q96ED9 719 aa20.9■□□□□ 0.94
SF3B4-202ENST00000457312 TRIB2Q92519 343 aa20.89■□□□□ 0.93
SF3B4-202ENST00000457312 PHIPQ8WWQ0 1821 aa20.88■□□□□ 0.93
SF3B4-202ENST00000457312 MAPK8IP3Q9UPT6 1336 aa20.88■□□□□ 0.93
SF3B4-202ENST00000457312 MIGA2Q7L4E1 593 aa20.88■□□□□ 0.93
SF3B4-202ENST00000457312 NECAB3Q96P71 396 aaPredicted RBP20.88■□□□□ 0.93
SF3B4-202ENST00000457312 CXCL11O14625 94 aa20.87■□□□□ 0.93
SF3B4-202ENST00000457312 MRPS5P82675 430 aaKnown RBP20.87■□□□□ 0.93
SF3B4-202ENST00000457312 NOL9Q5SY16 702 aaKnown RBP20.87■□□□□ 0.93
SF3B4-202ENST00000457312 FAM83AQ86UY5 434 aa20.87■□□□□ 0.93
SF3B4-202ENST00000457312 ANKRD13CQ8N6S4 541 aa20.87■□□□□ 0.93
SF3B4-202ENST00000457312 SMCR8Q8TEV9 937 aaPredicted RBP20.87■□□□□ 0.93
SF3B4-202ENST00000457312 MPHOSPH8Q99549 860 aa20.87■□□□□ 0.93
SF3B4-202ENST00000457312 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
SF3B4-202ENST00000457312 ZNF112Q9UJU3 913 aa20.87■□□□□ 0.93
SF3B4-202ENST00000457312 SLC45A1Q9Y2W3 748 aa20.87■□□□□ 0.93
SF3B4-202ENST00000457312 A0A0G2JLL6 359 aaPredicted RBP20.86■□□□□ 0.93
SF3B4-202ENST00000457312 TAF5LO75529 589 aa20.86■□□□□ 0.93
SF3B4-202ENST00000457312 PRKAR2AP13861 404 aaKnown RBP20.86■□□□□ 0.93
SF3B4-202ENST00000457312 ITGA6P23229 1130 aa20.86■□□□□ 0.93
SF3B4-202ENST00000457312 PRRT2Q7Z6L0 340 aaPredicted RBP20.86■□□□□ 0.93
SF3B4-202ENST00000457312 RLFQ13129 1914 aa20.85■□□□□ 0.93
SF3B4-202ENST00000457312 FAM110CQ1W6H9 321 aa20.85■□□□□ 0.93
SF3B4-202ENST00000457312 METTL22Q9BUU2 404 aaPredicted RBP20.85■□□□□ 0.93
SF3B4-202ENST00000457312 GJD2Q9UKL4 321 aa20.85■□□□□ 0.93
SF3B4-202ENST00000457312 CHL1O00533 1208 aa20.84■□□□□ 0.93
SF3B4-202ENST00000457312 FASTKD5Q7L8L6 764 aaKnown RBP20.84■□□□□ 0.93
SF3B4-202ENST00000457312 PPM1EQ8WY54 764 aa20.84■□□□□ 0.93
SF3B4-202ENST00000457312 PRKAG2Q9UGJ0 569 aa20.84■□□□□ 0.93
SF3B4-202ENST00000457312 LHX8Q68G74 356 aa20.83■□□□□ 0.93
SF3B4-202ENST00000457312 POTEEQ6S8J3 1075 aa20.83■□□□□ 0.93
SF3B4-202ENST00000457312 GADL1Q6ZQY3 521 aa20.83■□□□□ 0.93
SF3B4-202ENST00000457312 RIPK4P57078 832 aa20.82■□□□□ 0.92
SF3B4-202ENST00000457312 GRIK5Q16478 980 aa20.82■□□□□ 0.92
SF3B4-202ENST00000457312 FKBP1CQ5VVH2 108 aa20.82■□□□□ 0.92
SF3B4-202ENST00000457312 IL27Q8NEV9 243 aa20.82■□□□□ 0.92
SF3B4-202ENST00000457312 DOCK1Q14185 1865 aa20.81■□□□□ 0.92
SF3B4-202ENST00000457312 DOCK2Q92608 1830 aa20.81■□□□□ 0.92
SF3B4-202ENST00000457312 EPHX3Q9H6B9 360 aa20.81■□□□□ 0.92
SF3B4-202ENST00000457312 TMOD2Q9NZR1 351 aa20.81■□□□□ 0.92
SF3B4-202ENST00000457312 XIRP2A4UGR9 3374 aa20.81■□□□□ 0.92
SF3B4-202ENST00000457312 LOC285556D6RIA3 1793 aa20.8■□□□□ 0.92
SF3B4-202ENST00000457312 IGKV5-2P06315 115 aa20.8■□□□□ 0.92
SF3B4-202ENST00000457312 SENP6Q9GZR1 1112 aaPredicted RBP20.8■□□□□ 0.92
SF3B4-202ENST00000457312 REV3LO60673 3130 aa20.79■□□□□ 0.92
SF3B4-202ENST00000457312 ATN1P54259 1190 aaPredicted RBP20.79■□□□□ 0.92
SF3B4-202ENST00000457312 RTP1P59025 263 aa20.79■□□□□ 0.92
SF3B4-202ENST00000457312 TMEM31Q5JXX7 168 aa20.79■□□□□ 0.92
SF3B4-202ENST00000457312 AKNAD1Q5T1N1 836 aa20.79■□□□□ 0.92
SF3B4-202ENST00000457312 TDRD7Q8NHU6 1098 aaKnown RBP20.79■□□□□ 0.92
SF3B4-202ENST00000457312 P2RX7Q99572 595 aaKnown RBP20.79■□□□□ 0.92
SF3B4-202ENST00000457312 DNAJB2P25686 324 aa20.78■□□□□ 0.92
SF3B4-202ENST00000457312 CCND3P30281 292 aaPredicted RBP20.78■□□□□ 0.92
SF3B4-202ENST00000457312 MRE11P49959 708 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms