RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
TIMP1-205ENST00000456754 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
TIMP1-205ENST00000456754 PGAP2Q9UHJ9 254 aa17.06■□□□□ 0.32
TIMP1-205ENST00000456754 ADD2P35612 726 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 RHBDL3P58872 404 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 NFIAQ12857 509 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 SPDYE2Q495Y8 402 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 TTC22Q5TAA0 569 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 MRIQ9BWK5 157 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
TIMP1-205ENST00000456754 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
TIMP1-205ENST00000456754 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
TIMP1-205ENST00000456754 TCP10L2B9ZVM9 353 aa17.04■□□□□ 0.32
TIMP1-205ENST00000456754 TOMM70O94826 608 aa17.04■□□□□ 0.32
TIMP1-205ENST00000456754 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
TIMP1-205ENST00000456754 SH3RF3Q8TEJ3 882 aaPredicted RBP17.04■□□□□ 0.32
TIMP1-205ENST00000456754 RILPL2Q969X0 211 aa17.04■□□□□ 0.32
TIMP1-205ENST00000456754 FAM163AQ96GL9 167 aaPredicted RBP17.04■□□□□ 0.32
TIMP1-205ENST00000456754 FSD1Q9BTV5 496 aa17.04■□□□□ 0.32
TIMP1-205ENST00000456754 USP40Q9NVE5 1235 aa17.04■□□□□ 0.32
TIMP1-205ENST00000456754 CNTNAP1P78357 1384 aa17.03■□□□□ 0.32
TIMP1-205ENST00000456754 ITGBL1O95965 494 aaPredicted RBP17.03■□□□□ 0.32
TIMP1-205ENST00000456754 GSTO1P78417 241 aa17.03■□□□□ 0.32
TIMP1-205ENST00000456754 KRT26Q7Z3Y9 468 aa17.03■□□□□ 0.32
TIMP1-205ENST00000456754 ZFPM1Q8IX07 1006 aa17.03■□□□□ 0.32
TIMP1-205ENST00000456754 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
TIMP1-205ENST00000456754 SEC62Q99442 399 aaKnown RBP17.03■□□□□ 0.32
TIMP1-205ENST00000456754 DDX4Q9NQI0 724 aaKnown RBP17.03■□□□□ 0.32
TIMP1-205ENST00000456754 MMP14P50281 582 aa17.02■□□□□ 0.32
TIMP1-205ENST00000456754 LCORLQ8N3X6 602 aa17.02■□□□□ 0.32
TIMP1-205ENST00000456754 SMC1BQ8NDV3 1235 aa17.02■□□□□ 0.32
TIMP1-205ENST00000456754 ZC3H15Q8WU90 426 aaKnown RBP17.02■□□□□ 0.32
TIMP1-205ENST00000456754 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.32
TIMP1-205ENST00000456754 EVI5LQ96CN4 794 aa17.02■□□□□ 0.32
TIMP1-205ENST00000456754 RIOK1Q9BRS2 568 aaKnown RBP17.02■□□□□ 0.32
TIMP1-205ENST00000456754 PUS7LQ9H0K6 701 aaKnown RBP17.02■□□□□ 0.32
TIMP1-205ENST00000456754 RFX7Q2KHR2 1363 aa17.02■□□□□ 0.31
TIMP1-205ENST00000456754 FOCADQ5VW36 1801 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 M0R2C6 588 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
TIMP1-205ENST00000456754 WDHD1O75717 1129 aaPredicted RBP17.01■□□□□ 0.31
TIMP1-205ENST00000456754 LDHCP07864 332 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 SLURP2P0DP57 97 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 SDSP20132 328 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 TCP10Q12799 353 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 OSBP2Q969R2 916 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 TMEM39BQ9GZU3 492 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 FAM198AQ9UFP1 575 aa17.01■□□□□ 0.31
TIMP1-205ENST00000456754 PRKAB2O43741 272 aa17■□□□□ 0.31
TIMP1-205ENST00000456754 MYO1BO43795 1136 aa17■□□□□ 0.31
TIMP1-205ENST00000456754 MBD4O95243 580 aa17■□□□□ 0.31
TIMP1-205ENST00000456754 PICALMQ13492 652 aa17■□□□□ 0.31
TIMP1-205ENST00000456754 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
TIMP1-205ENST00000456754 SLF2Q8IX21 1173 aa17■□□□□ 0.31
TIMP1-205ENST00000456754 FAM227BQ96M60 508 aa17■□□□□ 0.31
TIMP1-205ENST00000456754 DDX24Q9GZR7 859 aaKnown RBP eCLIP17■□□□□ 0.31
TIMP1-205ENST00000456754 FZD1Q9UP38 647 aa17■□□□□ 0.31
TIMP1-205ENST00000456754 PITPNM2Q9BZ72 1349 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 SSC5DA1L4H1 1573 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 MAGEB6P1A0A0J9YX57 407 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 PPP4CP60510 307 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 RASA3Q14644 834 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 UBE3CQ15386 1083 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 SULF1Q8IWU6 871 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 CDCA5Q96FF9 252 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
TIMP1-205ENST00000456754 PASKQ96RG2 1323 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 EVX2Q03828 476 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
TIMP1-205ENST00000456754 SLC4A8Q2Y0W8 1093 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 CDC37L1Q7L3B6 337 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 SH3BP5LQ7L8J4 393 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 APOBEC3FQ8IUX4 373 aaKnown RBP16.98■□□□□ 0.31
TIMP1-205ENST00000456754 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 TGFBRAP1Q8WUH2 860 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 TEPSINQ96N21 525 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 IL25Q9H293 177 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 ZNF408Q9H9D4 720 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 TRPM7Q96QT4 1865 aa16.98■□□□□ 0.31
TIMP1-205ENST00000456754 BAZ2AQ9UIF9 1905 aaKnown RBP16.98■□□□□ 0.31
TIMP1-205ENST00000456754 ZMYM1Q5SVZ6 1142 aa16.97■□□□□ 0.31
TIMP1-205ENST00000456754 NBPF12Q5TAG4 269 aaPredicted RBP16.97■□□□□ 0.31
TIMP1-205ENST00000456754 SDR42E1Q8WUS8 393 aa16.97■□□□□ 0.31
TIMP1-205ENST00000456754 APPBP2Q92624 585 aa16.97■□□□□ 0.31
TIMP1-205ENST00000456754 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
TIMP1-205ENST00000456754 SIPA1L1O43166 1804 aa16.96■□□□□ 0.31
TIMP1-205ENST00000456754 MYH1P12882 1939 aa16.96■□□□□ 0.31
TIMP1-205ENST00000456754 BAG3O95817 575 aa16.96■□□□□ 0.31
TIMP1-205ENST00000456754 CST9Q5W186 159 aa16.96■□□□□ 0.31
TIMP1-205ENST00000456754 ZSCAN25Q6NSZ9 544 aa16.96■□□□□ 0.31
TIMP1-205ENST00000456754 MOB2Q70IA6 237 aa16.96■□□□□ 0.31
TIMP1-205ENST00000456754 NOL10Q9BSC4 688 aaKnown RBP16.96■□□□□ 0.31
TIMP1-205ENST00000456754 IDI2Q9BXS1 227 aa16.96■□□□□ 0.31
TIMP1-205ENST00000456754 TMOD2Q9NZR1 351 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms