RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 VPS33BQ9H267 617 aa19.17■□□□□ 0.66
TMEM220-202ENST00000455996 SH2B1Q9NRF2 756 aaPredicted RBP19.17■□□□□ 0.66
TMEM220-202ENST00000455996 PIM2Q9P1W9 311 aa19.17■□□□□ 0.66
TMEM220-202ENST00000455996 CHD4Q14839 1912 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 TIAM2Q8IVF5 1701 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 GAKO14976 1311 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 HAND2P61296 217 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 TOB2Q14106 344 aaPredicted RBP19.16■□□□□ 0.66
TMEM220-202ENST00000455996 TBC1D10CQ8IV04 446 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 SLF2Q8IX21 1173 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 SPRYD3Q8NCJ5 442 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 CRNKL1Q9BZJ0 848 aaKnown RBP19.16■□□□□ 0.66
TMEM220-202ENST00000455996 CWC22Q9HCG8 908 aaKnown RBP19.16■□□□□ 0.66
TMEM220-202ENST00000455996 CHMP5Q9NZZ3 219 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
TMEM220-202ENST00000455996 ANAPC4Q9UJX5 808 aa19.16■□□□□ 0.66
TMEM220-202ENST00000455996 HSP90AA1P07900 732 aaKnown RBP19.15■□□□□ 0.66
TMEM220-202ENST00000455996 MB21D2Q8IYB1 491 aaPredicted RBP19.15■□□□□ 0.66
TMEM220-202ENST00000455996 ATP8A2Q9NTI2 1148 aa19.15■□□□□ 0.66
TMEM220-202ENST00000455996 AATFQ9NY61 560 aaKnown RBP eCLIP19.15■□□□□ 0.66
TMEM220-202ENST00000455996 GPR75-ASB3A0A0A6YYF3 556 aa19.14■□□□□ 0.65
TMEM220-202ENST00000455996 TDO2P48775 406 aa19.14■□□□□ 0.65
TMEM220-202ENST00000455996 DIXDC1Q155Q3 683 aa19.14■□□□□ 0.65
TMEM220-202ENST00000455996 STRIP1Q5VSL9 837 aa19.14■□□□□ 0.65
TMEM220-202ENST00000455996 CERS5Q8N5B7 392 aa19.14■□□□□ 0.65
TMEM220-202ENST00000455996 NCOA7Q8NI08 942 aa19.14■□□□□ 0.65
TMEM220-202ENST00000455996 SDR42E1Q8WUS8 393 aa19.14■□□□□ 0.65
TMEM220-202ENST00000455996 G3V3G9 751 aa19.13■□□□□ 0.65
TMEM220-202ENST00000455996 ECE2O60344 883 aa19.13■□□□□ 0.65
TMEM220-202ENST00000455996 BAG3O95817 575 aa19.13■□□□□ 0.65
TMEM220-202ENST00000455996 DCAF8Q5TAQ9 597 aa19.13■□□□□ 0.65
TMEM220-202ENST00000455996 STAG1Q8WVM7 1258 aa19.13■□□□□ 0.65
TMEM220-202ENST00000455996 DBNDD1Q9H9R9 158 aa19.13■□□□□ 0.65
TMEM220-202ENST00000455996 TPCN1Q9ULQ1 816 aa19.13■□□□□ 0.65
TMEM220-202ENST00000455996 PSDA5PKW4 1024 aaPredicted RBP19.12■□□□□ 0.65
TMEM220-202ENST00000455996 SBK1Q52WX2 424 aa19.12■□□□□ 0.65
TMEM220-202ENST00000455996 NOL8Q76FK4 1167 aaKnown RBP19.12■□□□□ 0.65
TMEM220-202ENST00000455996 TCEANC2Q96MN5 208 aa19.12■□□□□ 0.65
TMEM220-202ENST00000455996 MRIQ9BWK5 157 aa19.12■□□□□ 0.65
TMEM220-202ENST00000455996 MKRN1Q9UHC7 482 aaKnown RBP19.12■□□□□ 0.65
TMEM220-202ENST00000455996 LARGE1O95461 756 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 MCM5P33992 734 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 EVCP57679 992 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 ME3Q16798 604 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 AOC3Q16853 763 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 DALRD3Q5D0E6 543 aaKnown RBP19.11■□□□□ 0.65
TMEM220-202ENST00000455996 DACT2Q5SW24 774 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 AKNAD1Q5T1N1 836 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 Q6ZUG5 572 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 CNNM2Q9H8M5 875 aa19.11■□□□□ 0.65
TMEM220-202ENST00000455996 DCP1AQ9NPI6 582 aaPredicted RBP19.11■□□□□ 0.65
TMEM220-202ENST00000455996 BRCA1P38398 1863 aaKnown RBP19.1■□□□□ 0.65
TMEM220-202ENST00000455996 ZNF646O15015 1829 aaPredicted RBP19.1■□□□□ 0.65
TMEM220-202ENST00000455996 PPIP5K2O43314 1243 aa19.1■□□□□ 0.65
TMEM220-202ENST00000455996 FGRP09769 529 aa19.1■□□□□ 0.65
TMEM220-202ENST00000455996 PCP11498 1178 aaKnown RBP19.1■□□□□ 0.65
TMEM220-202ENST00000455996 PLCG2P16885 1265 aa19.1■□□□□ 0.65
TMEM220-202ENST00000455996 ANTXR2P58335 489 aa19.1■□□□□ 0.65
TMEM220-202ENST00000455996 PPARAQ07869 468 aa19.1■□□□□ 0.65
TMEM220-202ENST00000455996 TRDNQ13061 729 aa19.1■□□□□ 0.65
TMEM220-202ENST00000455996 RALYLQ86SE5 291 aaKnown RBP19.1■□□□□ 0.65
TMEM220-202ENST00000455996 NOL10Q9BSC4 688 aaKnown RBP19.1■□□□□ 0.65
TMEM220-202ENST00000455996 TACC3Q9Y6A5 838 aa19.1■□□□□ 0.65
TMEM220-202ENST00000455996 USP17L3A6NCW0 530 aa19.09■□□□□ 0.65
TMEM220-202ENST00000455996 USP17L4A6NCW7 530 aa19.09■□□□□ 0.65
TMEM220-202ENST00000455996 CTR9Q6PD62 1173 aa19.09■□□□□ 0.65
TMEM220-202ENST00000455996 HHIPL2Q6UWX4 724 aa19.09■□□□□ 0.65
TMEM220-202ENST00000455996 USP17L1Q7RTZ2 530 aa19.09■□□□□ 0.65
TMEM220-202ENST00000455996 SH3RF3Q8TEJ3 882 aaPredicted RBP19.09■□□□□ 0.65
TMEM220-202ENST00000455996 RNF41Q9H4P4 317 aaPredicted RBP19.09■□□□□ 0.65
TMEM220-202ENST00000455996 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
TMEM220-202ENST00000455996 NEDD4P46934 1319 aa19.09■□□□□ 0.65
TMEM220-202ENST00000455996 PRC1O43663 620 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 BTDP43251 543 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 RHBDL3P58872 404 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 HDLBPQ00341 1268 aaKnown RBP19.08■□□□□ 0.65
TMEM220-202ENST00000455996 CTDSPL2Q05D32 466 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 ST3GAL1Q11201 340 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 LARP6Q9BRS8 491 aaKnown RBP19.08■□□□□ 0.65
TMEM220-202ENST00000455996 MTA3Q9BTC8 594 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 KRT23Q9C075 422 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 KCNQ5Q9NR82 932 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 ARPP21Q9UBL0 812 aaPredicted RBP19.08■□□□□ 0.65
TMEM220-202ENST00000455996 DAGLAQ9Y4D2 1042 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 MYH2Q9UKX2 1941 aa19.08■□□□□ 0.65
TMEM220-202ENST00000455996 MFSD6Q6ZSS7 791 aa19.08■□□□□ 0.64
TMEM220-202ENST00000455996 BRF1Q92994 677 aa19.08■□□□□ 0.64
TMEM220-202ENST00000455996 TTF2Q9UNY4 1162 aaKnown RBP19.08■□□□□ 0.64
TMEM220-202ENST00000455996 SCN9AQ15858 1988 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 YDJCA8MPS7 323 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 USP17L12C9JPN9 530 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 USP17L21D6R901 530 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 NT5C2P49902 561 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 FBXW7Q969H0 707 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 ZNF274Q96GC6 653 aaPredicted RBP19.07■□□□□ 0.64
TMEM220-202ENST00000455996 TMEM87BQ96K49 555 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 MXD3Q9BW11 206 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 LRRC2Q9BYS8 371 aa19.07■□□□□ 0.64
TMEM220-202ENST00000455996 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.07■□□□□ 0.64
TMEM220-202ENST00000455996 B4E1Z4 1266 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms