RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
SYPL1-202ENST00000455385 ARMT1Q9H993 441 aa12.94□□□□□ -0.34
SYPL1-202ENST00000455385 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 H7C1D1 291 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 WNT10BO00744 389 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 MBD4O95243 580 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 DLGAP5Q15398 846 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 NBPF9Q3BBW0 867 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 TRPM4Q8TD43 1214 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 STRBPQ96SI9 672 aaKnown RBP12.93□□□□□ -0.34
SYPL1-202ENST00000455385 ESYT1Q9BSJ8 1104 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 SGSM2O43147 1006 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 MMP14P50281 582 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 CDC42EP5Q6NZY7 148 aa12.93□□□□□ -0.34
SYPL1-202ENST00000455385 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
SYPL1-202ENST00000455385 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
SYPL1-202ENST00000455385 GPAA1O43292 621 aa12.92□□□□□ -0.34
SYPL1-202ENST00000455385 PRKAB2O43741 272 aa12.92□□□□□ -0.34
SYPL1-202ENST00000455385 USP40Q9NVE5 1235 aa12.92□□□□□ -0.34
SYPL1-202ENST00000455385 ASTN2O75129 1339 aaPredicted RBP12.92□□□□□ -0.34
SYPL1-202ENST00000455385 FOXP2O15409 715 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 BAG3O95817 575 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 LMOD1P29536 600 aaPredicted RBP12.91□□□□□ -0.34
SYPL1-202ENST00000455385 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 VPS53Q5VIR6 699 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 AIDAQ96BJ3 306 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 RRAGCQ9HB90 399 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 HACL1Q9UJ83 578 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 SEC24BO95487 1268 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 CACNB3P54284 484 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 ZNF526Q8TF50 670 aaPredicted RBP12.91□□□□□ -0.34
SYPL1-202ENST00000455385 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 ADARB2Q9NS39 739 aaKnown RBP12.91□□□□□ -0.34
SYPL1-202ENST00000455385 WDR90Q96KV7 1748 aa12.91□□□□□ -0.34
SYPL1-202ENST00000455385 CLRN2A0PK11 232 aa12.9□□□□□ -0.34
SYPL1-202ENST00000455385 EPHX2P34913 555 aa12.9□□□□□ -0.34
SYPL1-202ENST00000455385 TAF1DQ9H5J8 278 aaPredicted RBP12.9□□□□□ -0.34
SYPL1-202ENST00000455385 ZNF70Q9UC06 446 aaPredicted RBP12.9□□□□□ -0.34
SYPL1-202ENST00000455385 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
SYPL1-202ENST00000455385 WDHD1O75717 1129 aaPredicted RBP12.9□□□□□ -0.34
SYPL1-202ENST00000455385 PTH1RQ03431 593 aa12.9□□□□□ -0.34
SYPL1-202ENST00000455385 NFIAQ12857 509 aa12.9□□□□□ -0.34
SYPL1-202ENST00000455385 CASC1Q6TDU7 716 aa12.9□□□□□ -0.34
SYPL1-202ENST00000455385 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
SYPL1-202ENST00000455385 NOL10Q9BSC4 688 aaKnown RBP12.9□□□□□ -0.34
SYPL1-202ENST00000455385 NMRK2Q9NPI5 230 aa12.9□□□□□ -0.34
SYPL1-202ENST00000455385 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
SYPL1-202ENST00000455385 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
SYPL1-202ENST00000455385 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
SYPL1-202ENST00000455385 SCAF8Q9UPN6 1271 aaKnown RBP12.89□□□□□ -0.35
SYPL1-202ENST00000455385 SLC4A4Q9Y6R1 1079 aa12.89□□□□□ -0.35
SYPL1-202ENST00000455385 RAD50Q92878 1312 aa12.89□□□□□ -0.35
SYPL1-202ENST00000455385 SCN4AP35499 1836 aa12.89□□□□□ -0.35
SYPL1-202ENST00000455385 IQCA1LA6NCM1 817 aa12.88□□□□□ -0.35
SYPL1-202ENST00000455385 HSPD1P10809 573 aaKnown RBP12.88□□□□□ -0.35
SYPL1-202ENST00000455385 ZFPM1Q8IX07 1006 aa12.88□□□□□ -0.35
SYPL1-202ENST00000455385 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
SYPL1-202ENST00000455385 TGFBRAP1Q8WUH2 860 aa12.88□□□□□ -0.35
SYPL1-202ENST00000455385 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
SYPL1-202ENST00000455385 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
SYPL1-202ENST00000455385 VEGFAP15692 232 aaPredicted RBP12.88□□□□□ -0.35
SYPL1-202ENST00000455385 PLCG2P16885 1265 aa12.88□□□□□ -0.35
SYPL1-202ENST00000455385 CRNKL1Q9BZJ0 848 aaKnown RBP12.88□□□□□ -0.35
SYPL1-202ENST00000455385 LSG1Q9H089 658 aaKnown RBP12.88□□□□□ -0.35
SYPL1-202ENST00000455385 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
SYPL1-202ENST00000455385 CDK5RAP2Q96SN8 1893 aa12.88□□□□□ -0.35
SYPL1-202ENST00000455385 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
SYPL1-202ENST00000455385 MAPKAPK5Q8IW41 473 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 IDI2Q9BXS1 227 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 EPB41L4AQ9HCS5 686 aaPredicted RBP12.87□□□□□ -0.35
SYPL1-202ENST00000455385 DCP1AQ9NPI6 582 aaPredicted RBP12.87□□□□□ -0.35
SYPL1-202ENST00000455385 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
SYPL1-202ENST00000455385 ECM29Q5VYK3 1845 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 TCP10L2B9ZVM9 353 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 TCP10Q12799 353 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 ANGEL2Q5VTE6 544 aaKnown RBP12.87□□□□□ -0.35
SYPL1-202ENST00000455385 CERS3Q8IU89 383 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 BACH2Q9BYV9 841 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 VEZTQ9HBM0 779 aa12.87□□□□□ -0.35
SYPL1-202ENST00000455385 MYO1BO43795 1136 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 FGAP02671 866 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 APPP05067 770 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 GNAT2P19087 354 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 USP5P45974 858 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
SYPL1-202ENST00000455385 PICALMQ13492 652 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 EAPPQ56P03 285 aaPredicted RBP12.86□□□□□ -0.35
SYPL1-202ENST00000455385 IFNL3Q8IZI9 196 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 ANO2Q9NQ90 1003 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 SMIM22K7EJ46 135 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 FLT1P17948 1338 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 EVX2Q03828 476 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 MAP4K1Q92918 833 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 DSCC1Q9BVC3 393 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 ATP8A2Q9NTI2 1148 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms