RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 INPP5BP32019 993 aa20.02■□□□□ 0.8
GPC1-206ENST00000455111 WDR66Q8TBY9 1149 aa20.02■□□□□ 0.8
GPC1-206ENST00000455111 ATRNL1Q5VV63 1379 aa20.02■□□□□ 0.8
GPC1-206ENST00000455111 SALL1Q9NSC2 1324 aa20.02■□□□□ 0.79
GPC1-206ENST00000455111 CCL15-CCL14A0A0B4J2E2 113 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 ZBTB22O15209 634 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 IL15P40933 162 aaPredicted RBP20.01■□□□□ 0.79
GPC1-206ENST00000455111 TIMM10P62072 90 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 CCL15Q16663 113 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 MIGA2Q7L4E1 593 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 ZNF384Q8TF68 577 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 ARHGAP45Q92619 1136 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 CEP126Q9P2H0 1117 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 AK9Q5TCS8 1911 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 PHIPQ8WWQ0 1821 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 MAST3O60307 1309 aa20.01■□□□□ 0.79
GPC1-206ENST00000455111 TRIM27P14373 513 aa20■□□□□ 0.79
GPC1-206ENST00000455111 MTX1Q13505 466 aa20■□□□□ 0.79
GPC1-206ENST00000455111 CCDC102BQ68D86 513 aa20■□□□□ 0.79
GPC1-206ENST00000455111 WRNIP1Q96S55 665 aa20■□□□□ 0.79
GPC1-206ENST00000455111 MKI67P46013 3256 aaKnown RBP20■□□□□ 0.79
GPC1-206ENST00000455111 IRF6O14896 467 aa19.99■□□□□ 0.79
GPC1-206ENST00000455111 RASGRF1Q13972 1273 aa19.99■□□□□ 0.79
GPC1-206ENST00000455111 FAM151AQ8WW52 585 aa19.99■□□□□ 0.79
GPC1-206ENST00000455111 ZNF112Q9UJU3 913 aa19.99■□□□□ 0.79
GPC1-206ENST00000455111 PTPN22Q9Y2R2 807 aa19.99■□□□□ 0.79
GPC1-206ENST00000455111 PTPRFP10586 1907 aa19.98■□□□□ 0.79
GPC1-206ENST00000455111 POTEFA5A3E0 1075 aa19.98■□□□□ 0.79
GPC1-206ENST00000455111 TCP10Q12799 353 aa19.98■□□□□ 0.79
GPC1-206ENST00000455111 TFCP2Q12800 502 aa19.98■□□□□ 0.79
GPC1-206ENST00000455111 MOGSQ13724 837 aa19.98■□□□□ 0.79
GPC1-206ENST00000455111 SH3BP5LQ7L8J4 393 aa19.98■□□□□ 0.79
GPC1-206ENST00000455111 MYO5AQ9Y4I1 1855 aaKnown RBP19.98■□□□□ 0.79
GPC1-206ENST00000455111 GAKO14976 1311 aa19.98■□□□□ 0.79
GPC1-206ENST00000455111 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
GPC1-206ENST00000455111 BTBD19C9JJ37 291 aa19.97■□□□□ 0.79
GPC1-206ENST00000455111 SLC34A2O95436 690 aa19.97■□□□□ 0.79
GPC1-206ENST00000455111 GTF2A2P52657 109 aa19.97■□□□□ 0.79
GPC1-206ENST00000455111 SP3Q02447 781 aa19.97■□□□□ 0.79
GPC1-206ENST00000455111 ERO1BQ86YB8 467 aa19.97■□□□□ 0.79
GPC1-206ENST00000455111 ARHGAP39Q9C0H5 1083 aa19.97■□□□□ 0.79
GPC1-206ENST00000455111 CSADQ9Y600 493 aa19.97■□□□□ 0.79
GPC1-206ENST00000455111 A0A1B0GUL7 405 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 SRGAP3O43295 1099 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 LDHBP07195 334 aaKnown RBP19.96■□□□□ 0.79
GPC1-206ENST00000455111 CTGFP29279 349 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 TAF1CQ15572 869 aaPredicted RBP19.96■□□□□ 0.79
GPC1-206ENST00000455111 PI16Q6UXB8 463 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 XAGE2Q96GT9 111 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 ERO1AQ96HE7 468 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 DDX4Q9NQI0 724 aaKnown RBP19.96■□□□□ 0.79
GPC1-206ENST00000455111 USP40Q9NVE5 1235 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 TMOD2Q9NZR1 351 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 DENND2AQ9ULE3 1009 aa19.96■□□□□ 0.79
GPC1-206ENST00000455111 SIPA1L1O43166 1804 aa19.95■□□□□ 0.78
GPC1-206ENST00000455111 SEMA3EO15041 775 aa19.95■□□□□ 0.78
GPC1-206ENST00000455111 PPIL2Q13356 520 aa19.95■□□□□ 0.78
GPC1-206ENST00000455111 OTUD7BQ6GQQ9 843 aa19.95■□□□□ 0.78
GPC1-206ENST00000455111 ZNF341Q9BYN7 854 aa19.95■□□□□ 0.78
GPC1-206ENST00000455111 ADGRA2Q96PE1 1338 aa19.95■□□□□ 0.78
GPC1-206ENST00000455111 PDE4DIPQ5VU43 2346 aa19.94■□□□□ 0.78
GPC1-206ENST00000455111 DOCK1Q14185 1865 aa19.94■□□□□ 0.78
GPC1-206ENST00000455111 CDK5RAP2Q96SN8 1893 aa19.94■□□□□ 0.78
GPC1-206ENST00000455111 PHF20L1A8MW92 1017 aa19.94■□□□□ 0.78
GPC1-206ENST00000455111 ATF7IPQ6VMQ6 1270 aa19.94■□□□□ 0.78
GPC1-206ENST00000455111 CLUAP1Q96AJ1 413 aa19.94■□□□□ 0.78
GPC1-206ENST00000455111 EFCC1Q9HA90 598 aa19.94■□□□□ 0.78
GPC1-206ENST00000455111 PDS5AQ29RF7 1337 aaKnown RBP19.94■□□□□ 0.78
GPC1-206ENST00000455111 WDHD1O75717 1129 aaPredicted RBP19.93■□□□□ 0.78
GPC1-206ENST00000455111 GNAI3P08754 354 aa19.93■□□□□ 0.78
GPC1-206ENST00000455111 RGS3P49796 1198 aa19.93■□□□□ 0.78
GPC1-206ENST00000455111 ARMC5Q96C12 935 aa19.93■□□□□ 0.78
GPC1-206ENST00000455111 IDI2Q9BXS1 227 aa19.93■□□□□ 0.78
GPC1-206ENST00000455111 KCNH4Q9UQ05 1017 aa19.93■□□□□ 0.78
GPC1-206ENST00000455111 DDTLA6NHG4 134 aaPredicted RBP19.92■□□□□ 0.78
GPC1-206ENST00000455111 PPATQ06203 517 aa19.92■□□□□ 0.78
GPC1-206ENST00000455111 NOL9Q5SY16 702 aaKnown RBP19.92■□□□□ 0.78
GPC1-206ENST00000455111 DCAF15Q66K64 600 aa19.92■□□□□ 0.78
GPC1-206ENST00000455111 TMEM57Q8N5G2 664 aa19.92■□□□□ 0.78
GPC1-206ENST00000455111 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
GPC1-206ENST00000455111 ZFYVE28Q9HCC9 887 aa19.92■□□□□ 0.78
GPC1-206ENST00000455111 GNL3LQ9NVN8 582 aaKnown RBP19.92■□□□□ 0.78
GPC1-206ENST00000455111 HMG20BQ9P0W2 317 aa19.92■□□□□ 0.78
GPC1-206ENST00000455111 PTCH2Q9Y6C5 1203 aa19.92■□□□□ 0.78
GPC1-206ENST00000455111 MGAMO43451 1857 aa19.92■□□□□ 0.78
GPC1-206ENST00000455111 ATAD5Q96QE3 1844 aa19.91■□□□□ 0.78
GPC1-206ENST00000455111 TLR2O60603 784 aa19.91■□□□□ 0.78
GPC1-206ENST00000455111 CETPP11597 493 aa19.91■□□□□ 0.78
GPC1-206ENST00000455111 RHBDL3P58872 404 aa19.91■□□□□ 0.78
GPC1-206ENST00000455111 MAP3K10Q02779 954 aa19.91■□□□□ 0.78
GPC1-206ENST00000455111 FRAT1Q92837 279 aaPredicted RBP19.91■□□□□ 0.78
GPC1-206ENST00000455111 FAM163AQ96GL9 167 aaPredicted RBP19.91■□□□□ 0.78
GPC1-206ENST00000455111 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.91■□□□□ 0.78
GPC1-206ENST00000455111 MAST2Q6P0Q8 1798 aa19.9■□□□□ 0.78
GPC1-206ENST00000455111 SNAPC2Q13487 334 aa19.9■□□□□ 0.78
GPC1-206ENST00000455111 GPAT2Q6NUI2 795 aa19.9■□□□□ 0.78
GPC1-206ENST00000455111 C17orf99Q6UX52 265 aa19.9■□□□□ 0.78
GPC1-206ENST00000455111 TBC1D9Q6ZT07 1266 aa19.9■□□□□ 0.78
GPC1-206ENST00000455111 MROH7-TTC4A0A0A0MT08 1334 aa19.89■□□□□ 0.77
GPC1-206ENST00000455111 BTDP43251 543 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms