RNA–Protein interactions for RNA: ENST00000454947.1

SH3BP4-207, Transcript of SH3 domain binding protein 4, humanhuman

TSL 4

Gene SH3BP4, Length 500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-207ENST00000454947 RHBDL3P58872 404 aa11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 MCMDC2Q4G0Z9 681 aa11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 CERS3Q8IU89 383 aa11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 SLF2Q8IX21 1173 aa11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 SEC62Q99442 399 aaKnown RBP11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 ZMYM6O95789 1325 aa11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 CCDC171Q6TFL3 1326 aa11.29□□□□□ -0.6
SH3BP4-207ENST00000454947 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 COL2A1P02458 1487 aaPredicted RBP11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 GPAA1O43292 621 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 MYO1BO43795 1136 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 LDHCP07864 332 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 EPS15P42566 896 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 KIF4BQ2VIQ3 1234 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 CWC27Q6UX04 472 aaKnown RBP11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 LCORLQ8N3X6 602 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 TEKT1Q969V4 418 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 STRBPQ96SI9 672 aaKnown RBP11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 NOL10Q9BSC4 688 aaKnown RBP11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 BACH2Q9BYV9 841 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 TAF1DQ9H5J8 278 aaPredicted RBP11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 MYOZ2Q9NPC6 264 aa11.28□□□□□ -0.6
SH3BP4-207ENST00000454947 SHTN1A0MZ66 631 aa11.27□□□□□ -0.61
SH3BP4-207ENST00000454947 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
SH3BP4-207ENST00000454947 MBD4O95243 580 aa11.27□□□□□ -0.61
SH3BP4-207ENST00000454947 DLGAP5Q15398 846 aa11.27□□□□□ -0.61
SH3BP4-207ENST00000454947 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.61
SH3BP4-207ENST00000454947 CASC1Q6TDU7 716 aa11.27□□□□□ -0.61
SH3BP4-207ENST00000454947 RUFY2Q8WXA3 655 aa11.27□□□□□ -0.61
SH3BP4-207ENST00000454947 LAMA4Q16363 1823 aa11.27□□□□□ -0.61
SH3BP4-207ENST00000454947 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 POTECB2RU33 542 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 WDHD1O75717 1129 aaPredicted RBP11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 EGFRP00533 1210 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 BTDP43251 543 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 CFAP100Q494V2 611 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 TBC1D10BQ4KMP7 808 aaPredicted RBP11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 CCDC129Q6ZRS4 1044 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 LDHDQ86WU2 507 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 MIGA1Q8NAN2 632 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 IL17RAQ96F46 866 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 DSCC1Q9BVC3 393 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 TMOD2Q9NZR1 351 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 PCDHAC2Q9Y5I4 1007 aa11.26□□□□□ -0.61
SH3BP4-207ENST00000454947 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 SEC24BO95487 1268 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 PLCG2P16885 1265 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 GNAT2P19087 354 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 DYNLL1P63167 89 aaKnown RBP11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 ALX1Q15699 326 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 VPS53Q5VIR6 699 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 GIMAP6Q6P9H5 292 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 SMC1BQ8NDV3 1235 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 MAP4K1Q92918 833 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 PRMT6Q96LA8 375 aaPredicted RBP11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 IDI2Q9BXS1 227 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 AATFQ9NY61 560 aaKnown RBP eCLIP11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 NAV1Q8NEY1 1877 aa11.25□□□□□ -0.61
SH3BP4-207ENST00000454947 LAMB1P07942 1786 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 WNT10BO00744 389 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 KIF3CO14782 793 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 EIF5BO60841 1220 aaKnown RBP11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 TOMM70O94826 608 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 REC8O95072 547 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 BAG3O95817 575 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 MFAP1P55081 439 aaKnown RBP11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 TRPM4Q8TD43 1214 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 KCNB2Q92953 911 aa11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 DCPSQ96C86 337 aaKnown RBP11.24□□□□□ -0.61
SH3BP4-207ENST00000454947 SIPA1L1O43166 1804 aa11.23□□□□□ -0.61
SH3BP4-207ENST00000454947 PRKAB2O43741 272 aa11.23□□□□□ -0.61
SH3BP4-207ENST00000454947 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
SH3BP4-207ENST00000454947 PTH1RQ03431 593 aa11.23□□□□□ -0.61
SH3BP4-207ENST00000454947 APOBEC3FQ8IUX4 373 aaKnown RBP11.23□□□□□ -0.61
SH3BP4-207ENST00000454947 USP26Q9BXU7 913 aa11.23□□□□□ -0.61
SH3BP4-207ENST00000454947 CRNKL1Q9BZJ0 848 aaKnown RBP11.23□□□□□ -0.61
SH3BP4-207ENST00000454947 DCP1AQ9NPI6 582 aaPredicted RBP11.23□□□□□ -0.61
SH3BP4-207ENST00000454947 ATP8A2Q9NTI2 1148 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms