RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 TXNRD3Q86VQ6 643 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 ZNF384Q8TF68 577 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 CNNM2Q9H8M5 875 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 SENP2Q9HC62 589 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
RPE-216ENST00000454822 IRS2Q9Y4H2 1338 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 SERPINB2P05120 415 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 PROM2Q8N271 834 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 LEO1Q8WVC0 666 aaPredicted RBP10.37□□□□□ -0.75
RPE-216ENST00000454822 STAG1Q8WVM7 1258 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 SPATA32Q96LK8 384 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 RIOK1Q9BRS2 568 aaKnown RBP10.37□□□□□ -0.75
RPE-216ENST00000454822 KRT23Q9C075 422 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 TNRC6CQ9HCJ0 1690 aaKnown RBP10.37□□□□□ -0.75
RPE-216ENST00000454822 UBR3Q6ZT12 1888 aa10.37□□□□□ -0.75
RPE-216ENST00000454822 BRWD3Q6RI45 1802 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 CPLX1O14810 134 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 KDM4AO75164 1064 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 LETM1O95202 739 aaPredicted RBP10.36□□□□□ -0.75
RPE-216ENST00000454822 DYNLL1P63167 89 aaKnown RBP10.36□□□□□ -0.75
RPE-216ENST00000454822 GUCY1B3Q02153 619 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 TMEM67Q5HYA8 995 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 SDR42E1Q8WUS8 393 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 NSUN4Q96CB9 384 aaKnown RBP10.36□□□□□ -0.75
RPE-216ENST00000454822 LY9Q9HBG7 655 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 ANKIB1Q9P2G1 1089 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 ORC3Q9UBD5 711 aaPredicted RBP10.36□□□□□ -0.75
RPE-216ENST00000454822 LEMD3Q9Y2U8 911 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 CACNA1SQ13698 1873 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 ZBTB22O15209 634 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
RPE-216ENST00000454822 LIFRP42702 1097 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 MECOMQ03112 1051 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 PPARAQ07869 468 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
RPE-216ENST00000454822 TXNRD1Q16881 649 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 RRP12Q5JTH9 1297 aaKnown RBP10.36□□□□□ -0.75
RPE-216ENST00000454822 APOA5Q6Q788 366 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 SLC51AQ86UW1 340 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 SGMS1Q86VZ5 419 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 TSPY26PQ9H489 355 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 CFAP45Q9UL16 551 aa10.36□□□□□ -0.75
RPE-216ENST00000454822 MINDY4BA8MYZ0 360 aa10.35□□□□□ -0.75
RPE-216ENST00000454822 IFIT3O14879 490 aaKnown RBP10.35□□□□□ -0.75
RPE-216ENST00000454822 METAP2P50579 478 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPE-216ENST00000454822 ST5P78524 1137 aa10.35□□□□□ -0.75
RPE-216ENST00000454822 NFXL1Q6ZNB6 911 aa10.35□□□□□ -0.75
RPE-216ENST00000454822 STK11IPQ8N1F8 1099 aa10.35□□□□□ -0.75
RPE-216ENST00000454822 RPGRQ92834 1020 aaKnown RBP10.35□□□□□ -0.75
RPE-216ENST00000454822 RNF41Q9H4P4 317 aaPredicted RBP10.35□□□□□ -0.75
RPE-216ENST00000454822 ANAPC4Q9UJX5 808 aa10.35□□□□□ -0.75
RPE-216ENST00000454822 CHD4Q14839 1912 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 ZBTB43O43298 467 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 RXRAP19793 462 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 CRY2Q49AN0 593 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 OTUD7BQ6GQQ9 843 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 FBXO41Q8TF61 875 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 C8orf76Q96K31 380 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 TOMM22Q9NS69 142 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 XDHP47989 1333 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 GOLGA6L4A6NEF3 574 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 LIG1P18858 919 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 PRDX5P30044 214 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 CDC27P30260 824 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 DDR1Q08345 913 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 FBXO18Q8NFZ0 1043 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 ANP32BQ92688 251 aaKnown RBP10.34□□□□□ -0.75
RPE-216ENST00000454822 RBM17Q96I25 401 aaKnown RBP10.34□□□□□ -0.75
RPE-216ENST00000454822 PGBD1Q96JS3 809 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 BRIP1Q9BX63 1249 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 JAG2Q9Y219 1238 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 TIAM2Q8IVF5 1701 aa10.34□□□□□ -0.75
RPE-216ENST00000454822 EP400Q96L91 3159 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 CCDC69A6NI79 296 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 SMIM22K7EJ46 135 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 GPSM2P81274 684 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 CEBPZQ03701 1054 aaKnown RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 ATL3Q6DD88 541 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 GIMAP6Q6P9H5 292 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 MICU3Q86XE3 530 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 CCDC144CPQ8IYA2 1237 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 TDRD7Q8NHU6 1098 aaKnown RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 ZNF396Q96N95 335 aaPredicted RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 PPP1R9BQ96SB3 815 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 ZKSCAN3Q9BRR0 538 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 MTA3Q9BTC8 594 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 RCOR1Q9UKL0 485 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 SLC12A7Q9Y666 1083 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 GOLGA8AA7E2F4 631 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 POLRMTO00411 1230 aaKnown RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 CDKL5O76039 1030 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 RBM6P78332 1123 aaKnown RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 CCDC173Q0VFZ6 552 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 WTAPQ15007 396 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 SART3Q15020 963 aaKnown RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 NTRK3Q16288 839 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 SPTY2D1Q68D10 685 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms