RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ST3GAL1Q11201 340 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 ENOX2Q16206 610 aaKnown RBP12.86□□□□□ -0.35
DDR1-240ENST00000454612 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 CCDC34Q96HJ3 373 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 ANKIB1Q9P2G1 1089 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 PHLPP1O60346 1717 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 F8W031 263 aaPredicted RBP12.86□□□□□ -0.35
DDR1-240ENST00000454612 ZNF202O95125 648 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 KARSQ15046 597 aaKnown RBP12.86□□□□□ -0.35
DDR1-240ENST00000454612 IPO4Q8TEX9 1081 aaKnown RBP12.86□□□□□ -0.35
DDR1-240ENST00000454612 BTBD18B2RXH4 712 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 SSBP05455 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDR1-240ENST00000454612 KRT40Q6A162 431 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 BCL2L12Q9HB09 334 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 JCADQ9P266 1359 aa12.86□□□□□ -0.35
DDR1-240ENST00000454612 ZBTB22O15209 634 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 CDKL5O76039 1030 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 PIGBQ92521 554 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 APPBP2Q92624 585 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 UTP14AQ9BVJ6 771 aaKnown RBP12.85□□□□□ -0.35
DDR1-240ENST00000454612 ZNF174Q15697 407 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 ZHX3Q9H4I2 956 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 HELLSQ9NRZ9 838 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 GPS2Q13227 327 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 CARD10Q9BWT7 1032 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
DDR1-240ENST00000454612 GOLPH3LQ9H4A5 285 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 SENP2Q9HC62 589 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
DDR1-240ENST00000454612 PCDH11XQ9BZA7 1347 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 PCDH11YQ9BZA8 1340 aa12.85□□□□□ -0.35
DDR1-240ENST00000454612 GTF2F1P35269 517 aaKnown RBP eCLIP12.84□□□□□ -0.358e-7■■■■□ 24.7
DDR1-240ENST00000454612 RTN1Q16799 776 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 XBP1P17861 261 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 SNW1Q13573 536 aaKnown RBP12.84□□□□□ -0.35
DDR1-240ENST00000454612 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 ANO1Q5XXA6 986 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 KIF18AQ8NI77 898 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 POLR2DO15514 142 aaKnown RBP12.84□□□□□ -0.35
DDR1-240ENST00000454612 CASP1P29466 404 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 GNL3LQ9NVN8 582 aaKnown RBP12.84□□□□□ -0.35
DDR1-240ENST00000454612 VPS54Q9P1Q0 977 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 CALCOCO1Q9P1Z2 691 aa12.84□□□□□ -0.35
DDR1-240ENST00000454612 CDC25AP30304 524 aa12.83□□□□□ -0.35
DDR1-240ENST00000454612 NLRP5P59047 1200 aa12.83□□□□□ -0.35
DDR1-240ENST00000454612 MTX1Q13505 466 aa12.83□□□□□ -0.35
DDR1-240ENST00000454612 CCDC144BQ3MJ40 725 aa12.83□□□□□ -0.35
DDR1-240ENST00000454612 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.35
DDR1-240ENST00000454612 IL17RAQ96F46 866 aa12.83□□□□□ -0.35
DDR1-240ENST00000454612 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.35
DDR1-240ENST00000454612 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.35
DDR1-240ENST00000454612 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
DDR1-240ENST00000454612 NAP1L1P55209 391 aaKnown RBP12.83□□□□□ -0.36
DDR1-240ENST00000454612 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.36
DDR1-240ENST00000454612 NOL10Q9BSC4 688 aaKnown RBP12.83□□□□□ -0.36
DDR1-240ENST00000454612 MKNK2Q9HBH9 465 aa12.83□□□□□ -0.36
DDR1-240ENST00000454612 PHRF1Q9P1Y6 1649 aaKnown RBP12.83□□□□□ -0.36
DDR1-240ENST00000454612 BAZ2BQ9UIF8 2168 aaKnown RBP12.83□□□□□ -0.36
DDR1-240ENST00000454612 PFKFB2O60825 505 aa12.83□□□□□ -0.36
DDR1-240ENST00000454612 ATP1A3P13637 1013 aa12.83□□□□□ -0.36
DDR1-240ENST00000454612 RESTQ13127 1097 aa12.83□□□□□ -0.36
DDR1-240ENST00000454612 DIS3L2Q8IYB7 885 aaKnown RBP12.83□□□□□ -0.36
DDR1-240ENST00000454612 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.36
DDR1-240ENST00000454612 PDE6AP16499 860 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 MCAMP43121 646 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 GNG11P61952 73 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 PPARDQ03181 441 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 NR5A1Q13285 461 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 DDB1Q16531 1140 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 CAVIN4Q5BKX8 364 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 UTP14CQ5TAP6 766 aaKnown RBP12.82□□□□□ -0.36
DDR1-240ENST00000454612 NOC3LQ8WTT2 800 aaKnown RBP12.82□□□□□ -0.36
DDR1-240ENST00000454612 HINFPQ9BQA5 517 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
DDR1-240ENST00000454612 USP21Q9UK80 565 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 RGPD2P0DJD1 1756 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 PPFIBP1Q86W92 1011 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 LZTFL1Q9NQ48 299 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 CTAGE5O15320 804 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 PFKFB1P16118 471 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
DDR1-240ENST00000454612 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 KCNG4Q8TDN1 519 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 CAMTA1Q9Y6Y1 1673 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 TUBGCP6Q96RT7 1819 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 USP27XA6NNY8 438 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 TPM1P09493 284 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 FOXO4P98177 505 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 MYRIPQ8NFW9 859 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 UBXN4Q92575 508 aa12.82□□□□□ -0.36
DDR1-240ENST00000454612 AATFQ9NY61 560 aaKnown RBP eCLIP12.82□□□□□ -0.36
DDR1-240ENST00000454612 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 VWA3AA6NCI4 1184 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms